Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0615700-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:23938267:23942439:-1 gene:Os11g0615700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha5 subunit description:Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5). (Os11t0615700-01);Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5). (Os11t0615700-02)
Sequence	ATGTTCCTCACGAGGACGGAGTACGACCGCGGGGTGAACACCTTCTCCCCGGAGGGGCGG TTGTTCCAGGTCGAGTACGCCATTGAGGCCATCAAGTTGGGGTCAACTGCGATCGGGTTG AAGACCAAGGATGGTGTTGTCCTTGCTGTAGAGAAACGTGTGACCTCGCCACTGCTGGAA CCAAGCAGTGTGGAGAAAATCATGGAAATTGACGAGCACATAGGCTGTGCCATGAGTGGC CTTATTGCTGATGCTAGAACATTGGTTGAGCATGCTCGTGTTGAAACCCAGAATCATAGG TTCTCATATGGGGAGCCAATGACAGTAGAATCTACTACACAAGCTATCTGTGACTTAGCT CTGCGTTTTGGTGAAGGTGATGAAGAGTCGATGTCACGACCATTTGGTGTCTCTCTCCTT ATTGCTGGTCATGATGAGAATGGACCCAGCTTGTACTACACTGACCCATCAGGAACCTTT TGGCAGTGCAATGCCAAGGCAATTGGATCAGGTTCTGAAGGAGCTGATAGCTCATTACAG GAGCAGTACAATAAGGAGTTGACCCTTCAGGAGGCTGAGACCATAGCCCTGTCTATCTTG AAGCAGGTTATGGAAGAAAAGGTTACTCCAAACAACGTCGATATCGCAAAGGTTTCTCCC AACTACCACCTCTACACCCCTGCAGAGGTTGAAGCTGTCATTGCACGGTTGTGA

Peptide Sequence

PEP ID	Os11t0615700-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:23938267:23942439:-1 gene:Os11g0615700 transcript:Os11t0615700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha5 subunit description:Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5). (Os11t0615700-01);Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5). (Os11t0615700-02)
Sequence	MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLE PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLA LRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ EQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL

Transcript Sequence

Transcript ID	Os11t0615700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:23938267:23942439:-1 gene:Os11g0615700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha5 subunit description:Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5). (Os11t0615700-01);Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5). (Os11t0615700-02)
Sequence	GGAGCTCTCGATACTTTAGCCGCGATTCGGAGGGAAACCCTAGCTAGCTCCCGCTCTCGA TCCCGCGCCCGCCACCGCACTCGGCAAGATGTTCCTCACGAGGACGGAGTACGACCGCGG GGTGAACACCTTCTCCCCGGAGGGGCGGTTGTTCCAGGTCGAGTACGCCATTGAGGCCAT CAAGTTGGGGTCAACTGCGATCGGGTTGAAGACCAAGGATGGTGTTGTCCTTGCTGTAGA GAAACGTGTGACCTCGCCACTGCTGGAACCAAGCAGTGTGGAGAAAATCATGGAAATTGA CGAGCACATAGGCTGTGCCATGAGTGGCCTTATTGCTGATGCTAGAACATTGGTTGAGCA TGCTCGTGTTGAAACCCAGAATCATAGGTTCTCATATGGGGAGCCAATGACAGTAGAATC TACTACACAAGCTATCTGTGACTTAGCTCTGCGTTTTGGTGAAGGTGATGAAGAGTCGAT GTCACGACCATTTGGTGTCTCTCTCCTTATTGCTGGTCATGATGAGAATGGACCCAGCTT GTACTACACTGACCCATCAGGAACCTTTTGGCAGTGCAATGCCAAGGCAATTGGATCAGG TTCTGAAGGAGCTGATAGCTCATTACAGGAGCAGTACAATAAGGAGTTGACCCTTCAGGA GGCTGAGACCATAGCCCTGTCTATCTTGAAGCAGGTTATGGAAGAAAAGGTTACTCCAAA CAACGTCGATATCGCAAAGGTTTCTCCCAACTACCACCTCTACACCCCTGCAGAGGTTGA AGCTGTCATTGCACGGTTGTGAGAAGATTGCCATCGCGTGTTATTTTAATCAGCCCTAAG ACAGCCTCTGTATGAACTTCCTAAATGGATTATCAGTCCATTGTTTGCTATGGCTGTCAT GTTATGTTAACAAGATAGTGGCTGCTAGAGTTTATTACTGGCTCTAATAGTCTGGTGTGC AGCCCAGTCATTTGCTTGTTTTCAGCAGTGTTGAGACCATGTACTATCAAAAAGAGAACG ACAATCCTTTCCAAGATTTGGTTGCAACATTTCGAC