Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0610700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:23615076:23619274:-1 gene:Os11g0610700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-190 description:WD40 repeat-like domain containing protein. (Os11t0610700-01)
Sequence

ATGGCGCGGCGCGGCGGCGGGCAGACGTACGGGTTCCCGATCTACTGCGCCTCGTGGCTG
CCCCTCGCCCACATCCTCAATCCGCCTCCTCCGGTGGAGGAGGGGGATGCGGACGCGGAC
GCGGGCGCGGCCTCGTCGGAGTCCCCCGCTACGCCGCCTCCGCCTCCGCCGCTCATGGCG
GCGCTCGGGGGAGGGGGCGGGGAGGGGCGGAGCGGCGTGCCCAACGCGCTGGTGGTGGCC
GCGCTCGACACCTCCGCTGGGGCGGCCGCGGCGGCGGCGCTGTCCCCCGACCCGGTGTTG
AGGATGGGGACGGAGGAGCAGGTGCCGTACAGGATGGGCGTCCACCCGCGCGGCGACGGC
GTCCTCTGCGCATTCCCCAATGGCTGCAGGTTATTTCGATGGGAATCACAGGAAGGAGAG
GGACCTGATAATATAGCTTTGAGGGCTGATCAGGAGGCACTGACAGAGTTGAGTGATGCT
GGTTTGCAGTTAGCTGTGTCATTCAGTGGAGAAGGTTCAATACTTGCGACTGGTGGTGAG
GATGGTCATTTAAGGGTCTTCAAATGGCCTTCCATGGATTCCATTCTTGAAGAACCCGAT
ACGAAAACATCAGTGAAGGATTTAACCTTCAGCTCCGATGAACATTTCCTTGCTGTGAAC
AGAAGCAGTGGCCCATGTAGAGTATGGGACTTGAAGTCAGCAGAAGTTGTAGCTAATCTC
CCAAGAGAAGCAGGAGAAATATTTGGTTTCTGCAGATTCTCTAATCAGACTGACAACAGT
CAGATCCTCTTTGTTACAGCGATGCAAGGTGATTATGGGAAAATAATATCTTGGAATACG
ACCTCGTGGACGAGAATTGGGTCAAATAAAATAACACGTGAGGCAATTTCAGCATTTGCT
GTCTCGCCTGATTGTACACTTCTTGCAATTGGAACTATTGAAGGAAGCATTATTGTACTA
AGTTCAAAAAATATGCGGTCGCTTGTAACAGTTAAAAAGGCACATCTTGGCATTATTACT
ACATTGGCATTCTCTCAAGATTCAAGGACCTTGCTGTCGACTTCCTTCGATTCTACTGCT
AGGGTGACTTCAATTGGATCACCTAAGAGTCGTGGTATAAGTATATGGACCATGATACTG
GTTATTATTCTTGCAATTTTGGCATACTACTATATGCAGCATAAAGAGGATCTCTTAGCA
AGGTTTCTACATTGA

Peptide Sequence

PEP ID

Os11t0610700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:23615076:23619274:-1 gene:Os11g0610700 transcript:Os11t0610700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-190 description:WD40 repeat-like domain containing protein. (Os11t0610700-01)
Sequence

MARRGGGQTYGFPIYCASWLPLAHILNPPPPVEEGDADADAGAASSESPATPPPPPPLMA
ALGGGGGEGRSGVPNALVVAALDTSAGAAAAAALSPDPVLRMGTEEQVPYRMGVHPRGDG
VLCAFPNGCRLFRWESQEGEGPDNIALRADQEALTELSDAGLQLAVSFSGEGSILATGGE
DGHLRVFKWPSMDSILEEPDTKTSVKDLTFSSDEHFLAVNRSSGPCRVWDLKSAEVVANL
PREAGEIFGFCRFSNQTDNSQILFVTAMQGDYGKIISWNTTSWTRIGSNKITREAISAFA
VSPDCTLLAIGTIEGSIIVLSSKNMRSLVTVKKAHLGIITTLAFSQDSRTLLSTSFDSTA
RVTSIGSPKSRGISIWTMILVIILAILAYYYMQHKEDLLARFLH

Transcript Sequence

Transcript ID

Os11t0610700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:23615076:23619274:-1 gene:Os11g0610700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-190 description:WD40 repeat-like domain containing protein. (Os11t0610700-01)
Sequence

GAGGATCCGATCCGCTTGCGCCGCCGACCACCTCCAACTCCGGCGATGGCGCGGCGCGGC
GGCGGGCAGACGTACGGGTTCCCGATCTACTGCGCCTCGTGGCTGCCCCTCGCCCACATC
CTCAATCCGCCTCCTCCGGTGGAGGAGGGGGATGCGGACGCGGACGCGGGCGCGGCCTCG
TCGGAGTCCCCCGCTACGCCGCCTCCGCCTCCGCCGCTCATGGCGGCGCTCGGGGGAGGG
GGCGGGGAGGGGCGGAGCGGCGTGCCCAACGCGCTGGTGGTGGCCGCGCTCGACACCTCC
GCTGGGGCGGCCGCGGCGGCGGCGCTGTCCCCCGACCCGGTGTTGAGGATGGGGACGGAG
GAGCAGGTGCCGTACAGGATGGGCGTCCACCCGCGCGGCGACGGCGTCCTCTGCGCATTC
CCCAATGGCTGCAGGTTATTTCGATGGGAATCACAGGAAGGAGAGGGACCTGATAATATA
GCTTTGAGGGCTGATCAGGAGGCACTGACAGAGTTGAGTGATGCTGGTTTGCAGTTAGCT
GTGTCATTCAGTGGAGAAGGTTCAATACTTGCGACTGGTGGTGAGGATGGTCATTTAAGG
GTCTTCAAATGGCCTTCCATGGATTCCATTCTTGAAGAACCCGATACGAAAACATCAGTG
AAGGATTTAACCTTCAGCTCCGATGAACATTTCCTTGCTGTGAACAGAAGCAGTGGCCCA
TGTAGAGTATGGGACTTGAAGTCAGCAGAAGTTGTAGCTAATCTCCCAAGAGAAGCAGGA
GAAATATTTGGTTTCTGCAGATTCTCTAATCAGACTGACAACAGTCAGATCCTCTTTGTT
ACAGCGATGCAAGGTGATTATGGGAAAATAATATCTTGGAATACGACCTCGTGGACGAGA
ATTGGGTCAAATAAAATAACACGTGAGGCAATTTCAGCATTTGCTGTCTCGCCTGATTGT
ACACTTCTTGCAATTGGAACTATTGAAGGAAGCATTATTGTACTAAGTTCAAAAAATATG
CGGTCGCTTGTAACAGTTAAAAAGGCACATCTTGGCATTATTACTACATTGGCATTCTCT
CAAGATTCAAGGACCTTGCTGTCGACTTCCTTCGATTCTACTGCTAGGGTGACTTCAATT
GGATCACCTAAGAGTCGTGGTATAAGTATATGGACCATGATACTGGTTATTATTCTTGCA
ATTTTGGCATACTACTATATGCAGCATAAAGAGGATCTCTTAGCAAGGTTTCTACATTGA
GAAATTTGTCCAGGCTCTGATTTTCATCGCTTAATTTATCATCTGATCGTCTACTGGAGA
TATATGTGATACCGTCTGGGAGATCATTTTTGTCTTAGGGTCAAAAAGGAGAACTGTCCA
AATTTCTCCTGTCCGCTGAACATAGCAAGATCCAGGCCTTCCCTTTGTCACGCTTGTACA
AAAATGGCCATGTTGTCAAGAGTTTTGTAAAATTGAAGGGCTCATGTGAGTTATAATGCC
CTCTAGCTGCTCTCGTGAGGAAAATTTCTCGAGTATAATGTAGAAATTTGAGACCAAATT
TCATGTTCAAAACGGTGTGGGGGAATAATGGATTTTCCAGTGTTTGCGCCTTGCGGT