Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0610600-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:23610705:23612241:1 gene:Os11g0610600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os11t0610600-00)
Sequence	TACCTAAAATATTTCTTTTCCATATATCCTTTTAGTGCATGTTACTGTCACCCATCCTCC TTTTTATTATCACTAGACACAAAAATCCCAACAAAATCCAATTATAATCCAAATAGTACC CCTTCTTTTCTTTTTTATTTTTTACAGGTCACCGTTCCACCACATCGCACATATTCTTCG TCGCTAATTAGCTTCACCTGCGACCACACACACACCACCACCACCGCCGCGTCGCCATTC CACACCGCGTCAAGCAGCGCACGCCATCGCCGTCTCCTCCTCTTCTCCGGCGTCCAAGAA CCCCTCCCGTGCCCCGGCCATGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCGAA GCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACGCG CTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCCTT GTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTTCTACCACCTGTGCCCTTCGCCGCC GCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCT GCGCCGCTGACGCAGCAGCCGCAGCAGGGGGACGAGGAAGGTGGGGCGGCGGGGGCGGCG ATGGCGGCGGAGGAGGTGGAGGGCGACGACGACGACGACGACGGAGGAGGAGGGGTTCAC CACGTGTGGTACATACGCACCGTGGGGCTCGACGAGCGCGCCATCGCCGCCATCACCGCG CTGGTGTACGACGCCAAGAAGACCGGCGGCGGCATCGGGCTCGCCGGCGGCGGCGGCGGC GGCGGCGGGGGAAGCTGCGCGGTGTGCCTCACCGAGTTCCGCGACGGCGAGACGCTGCGC CTGCTGCCGCGGTGCCGCCACGCGTTCCACCGCGGCTGCATCGACACCTGGCTCCGCGCC CACGTCAACTGCCCGCTCTGCCGCGCGCCCGTCCAGATCAGCGACAAGTCCGCCGCCGCC GCCGCGGCGGCGGCGGCCAACGCCGCGCCGGGCGCCGCCGCGGCCGTTCCCGGCGGCGCG CCCGCGCCGAACCCGCGCAACGCAGCTGCCGCCGAAGCCGACAGAGGAGAGCTCCAGGGC TCGCCGGAGCGCGGCGTCAGGCGAGCCGCGTCGATGGTGACGCTGCCGAGGCGGCCATGG CCGGAGGTCTCGCTCCGGTCGCCGGCGTCGAACAGTGGGCGCATGGGCGAGATGGGCCTC GCCAAGATCGCTCGACTGATGAAATTCTCGGAAGTGTTGGAGATGGCCGGCATCGGAGCG ACCAGGTCGGTGTCCTTCGGCGGCCACGGCAGGTCCGGCCAGTCCGCCGCCGCCGGCGCC GGCAACAACGCCGACGAGATTTCACGGTGA

Peptide Sequence

PEP ID	Os11t0610600-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:23610705:23612241:1 gene:Os11g0610600 transcript:Os11t0610600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os11t0610600-00)
Sequence	YLKYFFSIYPFSACYCHPSSFLLSLDTKIPTKSNYNPNSTPSFLFYFLQVTVPPHRTYSS SLISFTCDHTHTTTTAASPFHTASSSARHRRLLLFSGVQEPLPCPGHAAAGAGQGQAAAE AQAAQAQAQAAQAGAGAEHALGAGARPDGRPVRHGAPRPLVLRHRLLAGLRVLPPVPFAA AAGGARASEVVAAAHAAHRAAPLTQQPQQGDEEGGAAGAAMAAEEVEGDDDDDDGGGGVH HVWYIRTVGLDERAIAAITALVYDAKKTGGGIGLAGGGGGGGGGSCAVCLTEFRDGETLR LLPRCRHAFHRGCIDTWLRAHVNCPLCRAPVQISDKSAAAAAAAAANAAPGAAAAVPGGA PAPNPRNAAAAEADRGELQGSPERGVRRAASMVTLPRRPWPEVSLRSPASNSGRMGEMGL AKIARLMKFSEVLEMAGIGATRSVSFGGHGRSGQSAAAGAGNNADEISR

Transcript Sequence

Transcript ID	Os11t0610600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:23610705:23612241:1 gene:Os11g0610600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os11t0610600-00)
Sequence	TACCTAAAATATTTCTTTTCCATATATCCTTTTAGTGCATGTTACTGTCACCCATCCTCC TTTTTATTATCACTAGACACAAAAATCCCAACAAAATCCAATTATAATCCAAATAGTACC CCTTCTTTTCTTTTTTATTTTTTACAGGTCACCGTTCCACCACATCGCACATATTCTTCG TCGCTAATTAGCTTCACCTGCGACCACACACACACCACCACCACCGCCGCGTCGCCATTC CACACCGCGTCAAGCAGCGCACGCCATCGCCGTCTCCTCCTCTTCTCCGGCGTCCAAGAA CCCCTCCCGTGCCCCGGCCATGCCGCCGCCGGAGCCGGACAAGGACAAGCCGCTGCCGAA GCCCAAGCCGCCCAAGCCCAAGCCCAAGCCGCCCAAGCCGGAGCCGGAGCCGAACACGCG CTCGGCGCCGGAGCGCGACCAGACGGCCGCCCCGTACGGCACGGTGCCCCCCGACCCCTT GTCCTGCGCCACCGACTGCTCGCCGGACTGCGTGTTCTACCACCTGTGCCCTTCGCCGCC GCCGCCGGTGGCGCCCGTGCATCTGAGGTCGTCGCGGCTGCCCACGCCGCTCATCGCGCT GCGCCGCTGACGCAGCAGCCGCAGCAGGGGGACGAGGAAGGTGGGGCGGCGGGGGCGGCG ATGGCGGCGGAGGAGGTGGAGGGCGACGACGACGACGACGACGGAGGAGGAGGGGTTCAC CACGTGTGGTACATACGCACCGTGGGGCTCGACGAGCGCGCCATCGCCGCCATCACCGCG CTGGTGTACGACGCCAAGAAGACCGGCGGCGGCATCGGGCTCGCCGGCGGCGGCGGCGGC GGCGGCGGGGGAAGCTGCGCGGTGTGCCTCACCGAGTTCCGCGACGGCGAGACGCTGCGC CTGCTGCCGCGGTGCCGCCACGCGTTCCACCGCGGCTGCATCGACACCTGGCTCCGCGCC CACGTCAACTGCCCGCTCTGCCGCGCGCCCGTCCAGATCAGCGACAAGTCCGCCGCCGCC GCCGCGGCGGCGGCGGCCAACGCCGCGCCGGGCGCCGCCGCGGCCGTTCCCGGCGGCGCG CCCGCGCCGAACCCGCGCAACGCAGCTGCCGCCGAAGCCGACAGAGGAGAGCTCCAGGGC TCGCCGGAGCGCGGCGTCAGGCGAGCCGCGTCGATGGTGACGCTGCCGAGGCGGCCATGG CCGGAGGTCTCGCTCCGGTCGCCGGCGTCGAACAGTGGGCGCATGGGCGAGATGGGCCTC GCCAAGATCGCTCGACTGATGAAATTCTCGGAAGTGTTGGAGATGGCCGGCATCGGAGCG ACCAGGTCGGTGTCCTTCGGCGGCCACGGCAGGTCCGGCCAGTCCGCCGCCGCCGGCGCC GGCAACAACGCCGACGAGATTTCACGGTGA