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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0603000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:23222907:23224222:1 gene:Os11g0603000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 2 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os11t0603000-01)
Sequence

ATGTCGTCGAGCCGGCGGAGCCGTACATCGTCGAGATTGGCGGCGGCGCCGCCGCCGACG
GATGAGCAGATGGCGGAGCTCATCTCGAAGCTGCAGGCCGTCCTCCCCACCCGCGGCGGC
GAGGCCAATGCCAAGCAGGCGTCAAGTGCCGAGGTGCTGCAGGAGGCGTGCCGCTACATC
CGGAGGCTTCACCGGGAGGCGGACGCCCTCAGCGAGAGGCTCGCCGAGCTCCTCCTCCTC
CAGCCGTCCGATCTCGCCATCAACGGCGCAGATGTGCCCGACCTCATCCGTAGCCTACTC
ATGTAA

Peptide Sequence

PEP ID

Os11t0603000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:23222907:23224222:1 gene:Os11g0603000 transcript:Os11t0603000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 2 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os11t0603000-01)
Sequence

MSSSRRSRTSSRLAAAPPPTDEQMAELISKLQAVLPTRGGEANAKQASSAEVLQEACRYI
RRLHREADALSERLAELLLLQPSDLAINGADVPDLIRSLLM

Transcript Sequence

Transcript ID

Os11t0603000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:23222907:23224222:1 gene:Os11g0603000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INCREASED LEAF INCLINATION 2 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os11t0603000-01)
Sequence

ACTGCTCATCGATCGATCCTCTCCTTTGACTGTAGCTTTGCCTAGCTAGGCTCACAAGCT
CAAGCTCTCTCTCTCTCTCGATTAGCAATGTCGTCGAGCCGGCGGAGCCGTACATCGTCG
AGATTGGCGGCGGCGCCGCCGCCGACGGATGAGCAGATGGCGGAGCTCATCTCGAAGCTG
CAGGCCGTCCTCCCCACCCGCGGCGGCGAGGCCAATGCCAAGCAGGCGTCAAGTGCCGAG
GTGCTGCAGGAGGCGTGCCGCTACATCCGGAGGCTTCACCGGGAGGCGGACGCCCTCAGC
GAGAGGCTCGCCGAGCTCCTCCTCCTCCAGCCGTCCGATCTCGCCATCAACGGCGCAGAT
GTGCCCGACCTCATCCGTAGCCTACTCATGTAATGCATCAATATATATGCTGTCGGCCTA
AAATGTTCTCTAGCTTCTTCATCTGTAGTAGCACAGATTAATTCAGCAAATGAAACCAAA
AAAAAAAAGAGAGTTACTCAGAGTAAGCCTTGTCATCTACTATGTAATTATAAGCAAGCA
TAAATCATAATTCATGTGTTATTGATCATTTTTATGGAGT