Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0602200-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:23161432:23164227:1 gene:Os11g0602200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 41, SUVH Histone Methyltransferase 1 description:Similar to SET domain protein SDG111. (Os11t0602200-01);Similar to SET1. (Os11t0602200-02)
Sequence	TTGTTTTCAGATGATCCTAGGGAATCTGTTGATAATGTACTCATGATGTTTGATGCACTG CGGCGGAGGCTCATGCAGTTGGATGAGGTGAAGCAAGGAGCAAAGCAGCAACATAACTTA AAGGCCGGGAGTATCATGATGAGTGCTGAACTTCGTGCAAATAAGAACAAGAGGATTGGA GAGGTTCCAGGTGTCGAGGTTGGTGATATGTTCTACTTCAGAATAGAGATGTGTCTGGTT GGACTGAATAGTCAGAGCATGTCTGGGATTGATTACATGTCTGCTAAGTTTGGTAATGAG GAGGATCCTGTGGCTATCAGTATCGTGTCAGCTGGTGTGTATGAGAATACCGAAGATGAC CCAGATGTGCTGGTTTACACTGGACAGGGCATGTCTGGAAAGGATGACCAAAAGCTTGAA AGAGGTAATCTTGCACTTGAAAGGAGTTTGCATAGAGGTAATCAAATCAGAGTTGTTCGT AGTGTAAGAGATTTGACTTGTCCTACTGGTAAGATATACATTTATGATGGCCTTTATAAA ATAAGAGAAGCATGGGTGGAGAAAGGAAAAACTGGCTTTAATGTGTTTAAACACAAGCTG CTCAGAGAACCTGGTCAACCTGATGGCATAGCAGTGTGGAAGAAGACTGAAAAATGGAGG GAGAATCCTTCCTCTCGAGACCATGTTATATTGCGTGACATATCATATGGTGCAGAAAGC AAGCCTGTTTGCCTTGTGAATGAAGTGGATGATGAGAAAGGTCCTAGCCACTTCAACTAC ACAACTAAACTGAACTACAGGAATTCTCTCAGCTCAATGAGAAAGATGCAAGGCTGCAAT TGCGCAAGTGTGTGCCTTCCTGGTGATAACAACTGCTCTTGCACTCATCGAAATGCCGGT GATCTTCCATACAGTGCTTCAGGCATACTTGTTAGCCGGATGCCTATGCTGTATGAGTGT AACGATTCCTGTACATGCTCACATAATTGCCGGAACCGAGTTGTACAGAAAGGTTCTCAG ATCCACTTTGAGGTGTTTAAGACAGGAGATCGAGGTTGGGGACTTCGTAGTTGGGATCCA ATTCGGGCAGGCACATTTATTTGTGAATATGCAGGAGAAGTTATTGACAGAAACAGTATC ATTGGAGAAGATGATTACATCTTTGAGACACCGTCTTCTGAGCAGAATTTAAGATGGAAC TATGCACCAGAATTACTGGGTGAACCCAGTCTTTCTGACTCAAGTGAGACACCTAAGCAA CTGCCAATAATTATCAGTGCAAAACGAACTGGAAACATAGCTCGCTTTATGAACCACAGC TGCTCACCAAATGTTTTTTGGCAACCAGTTTTGTATGATCATGGTGACGAGGGATATCCA CATATCGCATTCTTTGCAATCAAGCATATTCCTCCGATGACAGAGCTTACATATGATTAT GGTCAGAGCCAGGGTAATGTTCAACTGGGAATCACTATGAAGCAGCAGGGTGCATTCAGT GTTTCAAGATGCCATGTAATAAGGTTGGCCTTCGTCTGGATGAGAATGCAAAAGAGGGTA TTTATTGCAGAAAGCATTGGCATTGTACCAAACTTTATTGGAATAACTAGTATTTAG

Peptide Sequence

PEP ID	Os11t0602200-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:23161432:23164227:1 gene:Os11g0602200 transcript:Os11t0602200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 41, SUVH Histone Methyltransferase 1 description:Similar to SET domain protein SDG111. (Os11t0602200-01);Similar to SET1. (Os11t0602200-02)
Sequence	LFSDDPRESVDNVLMMFDALRRRLMQLDEVKQGAKQQHNLKAGSIMMSAELRANKNKRIG EVPGVEVGDMFYFRIEMCLVGLNSQSMSGIDYMSAKFGNEEDPVAISIVSAGVYENTEDD PDVLVYTGQGMSGKDDQKLERGNLALERSLHRGNQIRVVRSVRDLTCPTGKIYIYDGLYK IREAWVEKGKTGFNVFKHKLLREPGQPDGIAVWKKTEKWRENPSSRDHVILRDISYGAES KPVCLVNEVDDEKGPSHFNYTTKLNYRNSLSSMRKMQGCNCASVCLPGDNNCSCTHRNAG DLPYSASGILVSRMPMLYECNDSCTCSHNCRNRVVQKGSQIHFEVFKTGDRGWGLRSWDP IRAGTFICEYAGEVIDRNSIIGEDDYIFETPSSEQNLRWNYAPELLGEPSLSDSSETPKQ LPIIISAKRTGNIARFMNHSCSPNVFWQPVLYDHGDEGYPHIAFFAIKHIPPMTELTYDY GQSQGNVQLGITMKQQGAFSVSRCHVIRLAFVWMRMQKRVFIAESIGIVPNFIGITSI

Transcript Sequence

Transcript ID	Os11t0602200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:23161432:23164227:1 gene:Os11g0602200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 41, SUVH Histone Methyltransferase 1 description:Similar to SET domain protein SDG111. (Os11t0602200-01);Similar to SET1. (Os11t0602200-02)
Sequence	TTGTTTTCAGATGATCCTAGGGAATCTGTTGATAATGTACTCATGATGTTTGATGCACTG CGGCGGAGGCTCATGCAGTTGGATGAGGTGAAGCAAGGAGCAAAGCAGCAACATAACTTA AAGGCCGGGAGTATCATGATGAGTGCTGAACTTCGTGCAAATAAGAACAAGAGGATTGGA GAGGTTCCAGGTGTCGAGGTTGGTGATATGTTCTACTTCAGAATAGAGATGTGTCTGGTT GGACTGAATAGTCAGAGCATGTCTGGGATTGATTACATGTCTGCTAAGTTTGGTAATGAG GAGGATCCTGTGGCTATCAGTATCGTGTCAGCTGGTGTGTATGAGAATACCGAAGATGAC CCAGATGTGCTGGTTTACACTGGACAGGGCATGTCTGGAAAGGATGACCAAAAGCTTGAA AGAGGTAATCTTGCACTTGAAAGGAGTTTGCATAGAGGTAATCAAATCAGAGTTGTTCGT AGTGTAAGAGATTTGACTTGTCCTACTGGTAAGATATACATTTATGATGGCCTTTATAAA ATAAGAGAAGCATGGGTGGAGAAAGGAAAAACTGGCTTTAATGTGTTTAAACACAAGCTG CTCAGAGAACCTGGTCAACCTGATGGCATAGCAGTGTGGAAGAAGACTGAAAAATGGAGG GAGAATCCTTCCTCTCGAGACCATGTTATATTGCGTGACATATCATATGGTGCAGAAAGC AAGCCTGTTTGCCTTGTGAATGAAGTGGATGATGAGAAAGGTCCTAGCCACTTCAACTAC ACAACTAAACTGAACTACAGGAATTCTCTCAGCTCAATGAGAAAGATGCAAGGCTGCAAT TGCGCAAGTGTGTGCCTTCCTGGTGATAACAACTGCTCTTGCACTCATCGAAATGCCGGT GATCTTCCATACAGTGCTTCAGGCATACTTGTTAGCCGGATGCCTATGCTGTATGAGTGT AACGATTCCTGTACATGCTCACATAATTGCCGGAACCGAGTTGTACAGAAAGGTTCTCAG ATCCACTTTGAGGTGTTTAAGACAGGAGATCGAGGTTGGGGACTTCGTAGTTGGGATCCA ATTCGGGCAGGCACATTTATTTGTGAATATGCAGGAGAAGTTATTGACAGAAACAGTATC ATTGGAGAAGATGATTACATCTTTGAGACACCGTCTTCTGAGCAGAATTTAAGATGGAAC TATGCACCAGAATTACTGGGTGAACCCAGTCTTTCTGACTCAAGTGAGACACCTAAGCAA CTGCCAATAATTATCAGTGCAAAACGAACTGGAAACATAGCTCGCTTTATGAACCACAGC TGCTCACCAAATGTTTTTTGGCAACCAGTTTTGTATGATCATGGTGACGAGGGATATCCA CATATCGCATTCTTTGCAATCAAGCATATTCCTCCGATGACAGAGCTTACATATGATTAT GGTCAGAGCCAGGGTAATGTTCAACTGGGAATCACTATGAAGCAGCAGGGTGCATTCAGT GTTTCAAGATGCCATGTAATAAGGTTGGCCTTCGTCTGGATGAGAATGCAAAAGAGGGTA TTTATTGCAGAAAGCATTGGCATTGTACCAAACTTTATTGGAATAACTAGTATTTAGCGT AGCATCTGAATTCCGAGAAGGTTGGAACCGTGTTACTATGTTCTTGTAGTGTAGTTGTTT CTCCTGTTTAAGAGAACTTTACCAACTGTAGAATGCCATGCATATGGTTGCATCGCAAGA TTTTCCTGGGCTTCGCATGCCAGTCGTGCACTCGCCGTATGTTTTTCTGTAATATTAATG GCTACATAATGCATCCTGTAATAATCATGGTAGTAGCTCCAGTCATCTGCTGAGGTTG