Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0600900-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:23079578:23081682:1 gene:Os11g0600900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannose-6-phosphate isomerase (ManA). (Os11t0600900-01)
Sequence	CTGCAATCAGCTTTTACTAATTTAATGACAGCAAGCAAAGAAACAGTTTCTGAAGCAGTC TCAAAGCTAAAGAGTCGGCTGAATATTGAGAGTAAGGTTAGAACCTTGACAAAGAAGGAG CAGCTAGTGTTGTCACTGGAGATGCAGTACCCTGAAGATGTTGGTGTTTTAGCAGCATTC TTCTTTAACTATGTCAAGCTCAACCCCGGTGAAGCACTCTATATTGGTGCTAATGAACCA CATGCATATCTTTCGGGAGAGTGCGTCGAATGTATGGCCACATCTGACAATGTAGTTCGT GCTGGTCTGACCCCTAAATACAGAGACGTCCAAACTCTTTGCTCGATGCTGACATACAAG CAGAACTACCCGGAGATTCTGCGAGGAGTTCCAGTGCAAGCATATGTAACGCGCTACATA CCCCCATCTGAGGAGTTTGAAGTCGATCGCTGCCTGCTGCCCTCCGGTGAATCGGTCACC ATGTCACCGGTGCCTGGCCCATCCATCTTCCTTGTCATGACAGGGGAAGGCAAGATTGAG GCAGATTCCATGCTTGATGAAGGAAAGGCAAAGGAAGGCGATGTTTTCTTCGTGCCGGCG CACACCGAGGTCAGGATCCTTGCTTCTGGTCCTGGGAGCATGCAGCTTTACAGGGCTGGG GTGAACAGCAGATTCTTCAGCTGA

Peptide Sequence

PEP ID	Os11t0600900-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:23079578:23081682:1 gene:Os11g0600900 transcript:Os11t0600900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannose-6-phosphate isomerase (ManA). (Os11t0600900-01)
Sequence	LQSAFTNLMTASKETVSEAVSKLKSRLNIESKVRTLTKKEQLVLSLEMQYPEDVGVLAAF FFNYVKLNPGEALYIGANEPHAYLSGECVECMATSDNVVRAGLTPKYRDVQTLCSMLTYK QNYPEILRGVPVQAYVTRYIPPSEEFEVDRCLLPSGESVTMSPVPGPSIFLVMTGEGKIE ADSMLDEGKAKEGDVFFVPAHTEVRILASGPGSMQLYRAGVNSRFFS

Transcript Sequence

Transcript ID	Os11t0600900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:23079578:23081682:1 gene:Os11g0600900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannose-6-phosphate isomerase (ManA). (Os11t0600900-01)
Sequence	CTGCAATCAGCTTTTACTAATTTAATGACAGCAAGCAAAGAAACAGTTTCTGAAGCAGTC TCAAAGCTAAAGAGTCGGCTGAATATTGAGAGTAAGGTTAGAACCTTGACAAAGAAGGAG CAGCTAGTGTTGTCACTGGAGATGCAGTACCCTGAAGATGTTGGTGTTTTAGCAGCATTC TTCTTTAACTATGTCAAGCTCAACCCCGGTGAAGCACTCTATATTGGTGCTAATGAACCA CATGCATATCTTTCGGGAGAGTGCGTCGAATGTATGGCCACATCTGACAATGTAGTTCGT GCTGGTCTGACCCCTAAATACAGAGACGTCCAAACTCTTTGCTCGATGCTGACATACAAG CAGAACTACCCGGAGATTCTGCGAGGAGTTCCAGTGCAAGCATATGTAACGCGCTACATA CCCCCATCTGAGGAGTTTGAAGTCGATCGCTGCCTGCTGCCCTCCGGTGAATCGGTCACC ATGTCACCGGTGCCTGGCCCATCCATCTTCCTTGTCATGACAGGGGAAGGCAAGATTGAG GCAGATTCCATGCTTGATGAAGGAAAGGCAAAGGAAGGCGATGTTTTCTTCGTGCCGGCG CACACCGAGGTCAGGATCCTTGCTTCTGGTCCTGGGAGCATGCAGCTTTACAGGGCTGGG GTGAACAGCAGATTCTTCAGCTGACTTCAATAACACCGCAAATCTTCAGGGATTAAAGGT TATTGCGAGAGTAATTGGTAGGAAAACGGGTGTCTTACTGTCGTCCTTTCATTTTATCAT AAGGTAGCTAGTTAAGCCATCATAGTGTATAGGCAAATGGAGATAAAGTCTCTCTCTTTC ATACCCTTAATCCTGTTTATTTTTTTCCCCAATATGTAATTTACATTTTTCAGTACGCTG GAAGCAAATGAAATCTGTAGATGAGCTTCTAGTTTCGATTATTCATTCATCATGTACATG CGAAAATTGAAGTTTGCTTTGGATATAGAATAACTAATATGATTCCTTC