Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0599500-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:22949431:22954549:1 gene:Os11g0599500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52C description:Similar to RNA helicase (Fragment). (Os11t0599500-00)
Sequence	ATGGCGACCCCCTCCCGCACCTCCTGGGCCGACGTCGCCGACGCCGACCCCGCCCCGGCC CCCGCCCCCGCCGCCAACGGCCCCGCCCGCCCCGACCGGAGCTCCTACGTGCCCCCCCAC CTCCGCAACCGCGGGGCTTCGTCGGGTGGGGGCGCGGCGGCGCCTCCGCCCTCATCATCC TCCTCCTCCGCGCCGCCCCCTCGCGCCGCCCCTGGCCTCCTCGCCCCCCGCCCCGCCGCC GCCGGCATGGGGAGGATGGGCGGCGGCGGTGGCGGCGGAGGATTCGGTGGGCCAAGGAGG TGGGACCGGGAGCCGAACCCGTTCGGGAACGACGGCGACGCCGCGGCGGGGGCGGGGGAC GAGCCGGAGGTGTTCGACGCGCACCAGAACACCGGGATCAACTTCGACGCGTACGAGGAC ATCCCCGTGGAGACGAGCGGGAGGGAGGTGCCGCCGCCGGTGGGCACGTTCGCCGAGATC GACCTGGGCCAGGCGCTCAACGACAACATCCGCCGGTGCAAGTACGTGCGCCCCACGCCC GTGCAGCGGTACGCCATCCCGATCTCGCTCGCGGGGAGGGACCTCATGGCGTGCGCGCAG ACCGGGTCCGGGAAGACGGCCGCCTTCTGCTTCCCCATCATCAGCGGCATCATGCGCGGC CCGCCCGCGCAAAGGCCCCAGCGCGGCGGGATGAGGACCGCCTGCCCCCTCGCGCTCATC CTCTCCCCCACCAGGGAGCTCTCCATGCAGATTCATGAGGAGGCGAGAAAATTTTCCTAT CAGACCGGTGTCAGGGTGGTTGTTGCATATGGAGGAGCACCTATTAATCAGCAGTTGAGA GATCTTGAGAGGGGTGTTGACATTCTTGTGGCTACTCCTGGCCGTTTGGTTGATTTATTG GAGAGGGCAAGAGTATCTTTGCAATCTATCAGATATCTTGCCCTTGATGAGGCAGATAGA ATGCTTGATATGGGTTTTGAACCGCAAGTTAGGAGAATTGTTGAGCAAATGGACATGCCT CCGCCAGGTGCCAGGCAGACAATGTTGTTCAGCGCCACGTTCCCAAAAGAAATCCAGAGA ATGGCATCTGACTTCCTGGAGAACTACATATTCCTGGCTGTTGGAAGAGTTGGGTCAAGT ACAGATTTGATTGTACAGAGAGTTGAGTTTGTGCAGGAGGCAGACAAAAGAAGCCACTTG ATGGATCTGCTTCATGCACAAAGAGACAGTGCTACTCCAGGAAAGCCAACTCTTACACTT GTCTTTGTGGAAACCAAAAGGGGTGCTGATTCGTTGGAGCACTGGTTGTGTATGAATGGA TTTCCAGCTACTTCTATTCACGGTGATAGAAACCAGCAGGAAAGAGAGTATGCTTTGAGA TCCTTCAAAAGTGGACATACTCCTATTCTAGTTGCAACTGATGTGGCAGCCCGGGGCCTT GACATTCCTCATGTTGCTCATGTTGTGAACTTTGATCTTCCCAATGATATAGATGATTAC GTCCACAGGATTGGGAGGACAGGGAGGGCAGGAAAAAGTGGTCTTGCAACTGCTTTCTTC AATGAGAATAACTCTTCCATGGCAAGGTCTTTGGCTGAGCTAATGCAAGAATCTAATCAA GAGGTACCTGCGTGGTTGTCTCGCTATGCTGCTCGCCCATCTTATGGTGGGGGTGGTGGG AGGAACAGAAGGTCCGGTGGTGGGAGCCGCTTCGGTGGCCGTGACTTCCGCAGGGATTCT TCCTCTGGAAGAGGTGGCGGTGACTACTATGGTGGAGGCAGCAGCGGTGGAGCTGGTGGA TATGGTGGTTCCTCTGCATATGGGGGTGGCGGCTATGGTGGCGGCGCGGGTGCTCCAAGT GCCTGGGATTAA

Peptide Sequence

PEP ID	Os11t0599500-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:22949431:22954549:1 gene:Os11g0599500 transcript:Os11t0599500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52C description:Similar to RNA helicase (Fragment). (Os11t0599500-00)
Sequence	MATPSRTSWADVADADPAPAPAPAANGPARPDRSSYVPPHLRNRGASSGGGAAAPPPSSS SSSAPPPRAAPGLLAPRPAAAGMGRMGGGGGGGGFGGPRRWDREPNPFGNDGDAAAGAGD EPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTP VQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALI LSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLL ERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPKEIQR MASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTL VFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGL DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQ EVPAWLSRYAARPSYGGGGGRNRRSGGGSRFGGRDFRRDSSSGRGGGDYYGGGSSGGAGG YGGSSAYGGGGYGGGAGAPSAWD

Transcript Sequence

Transcript ID	Os11t0599500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:22949431:22954549:1 gene:Os11g0599500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52C description:Similar to RNA helicase (Fragment). (Os11t0599500-00)
Sequence	ATGGCGACCCCCTCCCGCACCTCCTGGGCCGACGTCGCCGACGCCGACCCCGCCCCGGCC CCCGCCCCCGCCGCCAACGGCCCCGCCCGCCCCGACCGGAGCTCCTACGTGCCCCCCCAC CTCCGCAACCGCGGGGCTTCGTCGGGTGGGGGCGCGGCGGCGCCTCCGCCCTCATCATCC TCCTCCTCCGCGCCGCCCCCTCGCGCCGCCCCTGGCCTCCTCGCCCCCCGCCCCGCCGCC GCCGGCATGGGGAGGATGGGCGGCGGCGGTGGCGGCGGAGGATTCGGTGGGCCAAGGAGG TGGGACCGGGAGCCGAACCCGTTCGGGAACGACGGCGACGCCGCGGCGGGGGCGGGGGAC GAGCCGGAGGTGTTCGACGCGCACCAGAACACCGGGATCAACTTCGACGCGTACGAGGAC ATCCCCGTGGAGACGAGCGGGAGGGAGGTGCCGCCGCCGGTGGGCACGTTCGCCGAGATC GACCTGGGCCAGGCGCTCAACGACAACATCCGCCGGTGCAAGTACGTGCGCCCCACGCCC GTGCAGCGGTACGCCATCCCGATCTCGCTCGCGGGGAGGGACCTCATGGCGTGCGCGCAG ACCGGGTCCGGGAAGACGGCCGCCTTCTGCTTCCCCATCATCAGCGGCATCATGCGCGGC CCGCCCGCGCAAAGGCCCCAGCGCGGCGGGATGAGGACCGCCTGCCCCCTCGCGCTCATC CTCTCCCCCACCAGGGAGCTCTCCATGCAGATTCATGAGGAGGCGAGAAAATTTTCCTAT CAGACCGGTGTCAGGGTGGTTGTTGCATATGGAGGAGCACCTATTAATCAGCAGTTGAGA GATCTTGAGAGGGGTGTTGACATTCTTGTGGCTACTCCTGGCCGTTTGGTTGATTTATTG GAGAGGGCAAGAGTATCTTTGCAATCTATCAGATATCTTGCCCTTGATGAGGCAGATAGA ATGCTTGATATGGGTTTTGAACCGCAAGTTAGGAGAATTGTTGAGCAAATGGACATGCCT CCGCCAGGTGCCAGGCAGACAATGTTGTTCAGCGCCACGTTCCCAAAAGAAATCCAGAGA ATGGCATCTGACTTCCTGGAGAACTACATATTCCTGGCTGTTGGAAGAGTTGGGTCAAGT ACAGATTTGATTGTACAGAGAGTTGAGTTTGTGCAGGAGGCAGACAAAAGAAGCCACTTG ATGGATCTGCTTCATGCACAAAGAGACAGTGCTACTCCAGGAAAGCCAACTCTTACACTT GTCTTTGTGGAAACCAAAAGGGGTGCTGATTCGTTGGAGCACTGGTTGTGTATGAATGGA TTTCCAGCTACTTCTATTCACGGTGATAGAAACCAGCAGGAAAGAGAGTATGCTTTGAGA TCCTTCAAAAGTGGACATACTCCTATTCTAGTTGCAACTGATGTGGCAGCCCGGGGCCTT GACATTCCTCATGTTGCTCATGTTGTGAACTTTGATCTTCCCAATGATATAGATGATTAC GTCCACAGGATTGGGAGGACAGGGAGGGCAGGAAAAAGTGGTCTTGCAACTGCTTTCTTC AATGAGAATAACTCTTCCATGGCAAGGTCTTTGGCTGAGCTAATGCAAGAATCTAATCAA GAGGTACCTGCGTGGTTGTCTCGCTATGCTGCTCGCCCATCTTATGGTGGGGGTGGTGGG AGGAACAGAAGGTCCGGTGGTGGGAGCCGCTTCGGTGGCCGTGACTTCCGCAGGGATTCT TCCTCTGGAAGAGGTGGCGGTGACTACTATGGTGGAGGCAGCAGCGGTGGAGCTGGTGGA TATGGTGGTTCCTCTGCATATGGGGGTGGCGGCTATGGTGGCGGCGCGGGTGCTCCAAGT GCCTGGGATTAATTTATAGTTGCTCCCTATTAGGGTCCGTCAGGTCTAGGTTGCGTTTTA CTCTAGTTTCCTCAATAGTATACATTTTTGGTAGGAGCTGATATACAGCGACAATACAAG GTGAACTGTGTCATCCCCTTTTTTTTCTTCTGGTTGCTACAAGGTAGTCTTATCTCGCAG ATGTCCATTATGGAGAGTCTTGAGGACTTTCAAGCACACACAAGATTCCTAGTTAGGAAT AGTTTTTCCGGGGACTGAAATTCCTAGTTAGGGATAGTAGTTGGTATTGGTAGACTGACA TTTGGTGCTTGATGCCAAGTTTCTGCCTTTTTGCCGTTTCCTTGGTCCATGTCTCATTTT GGTGGTCGGTTGGTTGTAGAGCTTGTGGTGAGGGAGGCTTTTGCGGCTTGATTTTTGACC GAAGTTTGATTTTGATACCCAGGTTGAACAAAGAGGTAGGAGGATATGTAGTCCTTTAGA TCTTGTTGTAATGTATATACTGTGAGGTGAGGCTGGGAAAGAATAAGTTTTGTCTAGGTT TATAAAGGAAGAAGGGGGAAATTCTGTGATGTTTGTTCCTTGAGAGGATACATGTTGTGA ATTTGTTTTGAATGGATGAGTGTCAATTATTATTAT