Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0598800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:22876403:22884442:1 gene:Os11g0598800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os11t0598800-01)
Sequence	ATGGACTGGGACAGCGCCACCCCCGGCTTCCGCGCGCGGGTGAAGGACCTCACCGGGCCA CTCCCGGCCGAGCGGGAAGGGGTTGACGTCAAGGAGGAGAGGCTCCATGAAGCGGTGGAG CTCGCCGTCGACTTCCACTCGGCGCTCGCGTACCACGTCGTGGGATACGTGCGCGCCGCG CTCGGGGAGGACGAGTTGGCGCTCGATTCCCTTCGCCTCGCCAGGGATCTCGCCCCCAGC GACCTCGGCATCGCCTTCACCCTCGCCAAGAGGTACGCCGCTAGGGAGCAGTTTGATCTG GCGGTGGAAGCGTGCCAACGCGCGCTCGGCCGAGGTGACGCTGATCTCGTCGACCCGCAG CTAAACGCCGTCTTCGAGTCCCGCCACTTGGAGCCGAGCAAAGAGGCGCGGATCTCCACT GCTAAGAATGGCCTCAAGCAACTCCTTATCTCCGCCTTGTCGAAGATCGCCATCCCGATG GCCCGAGATCGTTGGAACGGCATGAGCGAGGAGACGCGCCGCAGTTTCCTGACAGTGGGT ATTGACGAGATGGTAGCATACTGCTGTGCTAAGCCGTCTGACGAGTGTCAGATGAGTGCT CTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGAATGGATCTGCTGGCTGTGCCCT CAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCAGTTGCATGTTGAGGATGATGAG TTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTTTGTGCCGGAGAGGATATCTGAT GAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATCTGATGTCAATCCTACTGAAGAA GCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTACATTTCAGTACCTCAAGGATAAG AAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAAATTCACGAAAAACCGGATTGAA GAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTGGAGGGCTTCTGTTG CTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCGAGCAGGATAGCCGT GATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTATAGGTACTGATGAG AATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGTTTAGCTGGCTATCT AGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGCAAGCCTGTCTAGAT AAGGGAACTCATGCCCTTGGAAAGTTGAATGGAAGGGCCGCTGCATTGATAGAGAAAGTT AATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATTTTGGTGAAAAGGCT AAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATTTGAAGAAAAACCTC TTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTTACCAGCTATGAAAGATTTCCTA TGGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTCAAGTTCTGAGGGTGATAAAGTT TCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGAAGATATTAATGCAGGTCTCAAT ATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTACCGAGGACAATCTA CAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGCTTCCAGGCGATAGT AAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTAACACAAGCACCTTG GGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCACCATCTGATTACTCT GGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTGGAACTGCCTATCCA AATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCATTGTGGCACTTAAGG CCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGA AAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGATAAG AGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTTATCAAGATTTTA GAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATA GTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAAC ATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAA CTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCAACGTTGGTGCAAGT GAACTGCGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAG TTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCATGTTACTTCACAACTGCT TTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCT GCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATG GTTTCTGCGGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAG TGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTG CTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGAC CCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTAG

Peptide Sequence

PEP ID	Os11t0598800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:22876403:22884442:1 gene:Os11g0598800 transcript:Os11t0598800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os11t0598800-01)
Sequence	MDWDSATPGFRARVKDLTGPLPAEREGVDVKEERLHEAVELAVDFHSALAYHVVGYVRAA LGEDELALDSLRLARDLAPSDLGIAFTLAKRYAAREQFDLAVEACQRALGRGDADLVDPQ LNAVFESRHLEPSKEARISTAKNGLKQLLISALSKIAIPMARDRWNGMSEETRRSFLTVG IDEMVAYCCAKPSDECQMSALTGALDFVKDNREWICWLCPQCEMTFLTAKTFQLHVEDDE FSRSQEFKESLLFVPERISDEQTEFIKCWTLPSDVNPTEEAEGEKILTKIKSTFQYLKDK KALSVDLFDNLIKFTKNRIEEAVTQNYSCITSLDPGGLLLLGTYLDLLRLRVGDAEQDSR DNFGGGVVQDACVLSIGTDENVLRITDGSSNQDALFSWLSRPSRQDPFTSWDNMRQACLD KGTHALGKLNGRAAALIEKVNLKRGLTATQTYEAYFGEKAKIDIEIMQLVAEVDNLKKNL LEVCTYDYREIILPAMKDFLWAKLCNVPPKGVSSSEGDKVSEASIENRDPVQEDINAGLN IISPESVLQEDDGKATEDNLQGGDSTVPDCNGVEELPGDSKVLQSGKKLELPPRANTSTL GSSETPMEKENKTSSPSDYSGSNEGSANISSNGVTGTAYPNSENELKSLFSALLSLWHLR PFTDKFMKKAPLYPHFGVSGKDRNCMLCYLFHSFNAFSDKSDSTATYRLSCLRPSFIKIL EEANVSLKEETNLAVKYIEIVLNMVHTSETAKCISNNSKNILYKTTLFSSCPDHRCLSHE LFGMHKNATESTYFLNVGASELRNIEMNTFADVIKSVDKKFHCNTESNAHNHPPCYFTTA FGYPSENDSHLVSGLLVSIAAPLDINPVYEGLHSECKYTMVSAVFRAEGRDICLAREEEK WLVYDNSLREVKEFDSWEKVLEEYSRSSFCPQIIFFERIDPVSEAAGTEVTV

Transcript Sequence

Transcript ID	Os11t0598800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:22876403:22884442:1 gene:Os11g0598800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os11t0598800-01)
Sequence	ACTGCGCCTCCGCATTTCTCGCCTCGCCCACCCCCACACGCAACCGACCGACCCATCCTT ACCACCCACCCCACCCCACGCTCCCCTCCTCCGCGGGCTTGGCATTTCAACAAACACCTC GCGTGCACCTCCCTCGCCGCCACCTCCTCGCCGCGCGCCGCCTCCCACTCCTCCTCCTCC CGGCCTCCGCGCGCCACCGGCCTCGGCAGCTCCCCGTGGGACGCGGGGGAACAAGACGAG CCCGAGCAGGAGCAGGAGCAACATGGACTGGGACAGCGCCACCCCCGGCTTCCGCGCGCG GGTGAAGGACCTCACCGGGCCACTCCCGGCCGAGCGGGAAGGGGTTGACGTCAAGGAGGA GAGGCTCCATGAAGCGGTGGAGCTCGCCGTCGACTTCCACTCGGCGCTCGCGTACCACGT CGTGGGATACGTGCGCGCCGCGCTCGGGGAGGACGAGTTGGCGCTCGATTCCCTTCGCCT CGCCAGGGATCTCGCCCCCAGCGACCTCGGCATCGCCTTCACCCTCGCCAAGAGGTACGC CGCTAGGGAGCAGTTTGATCTGGCGGTGGAAGCGTGCCAACGCGCGCTCGGCCGAGGTGA CGCTGATCTCGTCGACCCGCAGCTAAACGCCGTCTTCGAGTCCCGCCACTTGGAGCCGAG CAAAGAGGCGCGGATCTCCACTGCTAAGAATGGCCTCAAGCAACTCCTTATCTCCGCCTT GTCGAAGATCGCCATCCCGATGGCCCGAGATCGTTGGAACGGCATGAGCGAGGAGACGCG CCGCAGTTTCCTGACAGTGGGTATTGACGAGATGGTAGCATACTGCTGTGCTAAGCCGTC TGACGAGTGTCAGATGAGTGCTCTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGA ATGGATCTGCTGGCTGTGCCCTCAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCA GTTGCATGTTGAGGATGATGAGTTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTT TGTGCCGGAGAGGATATCTGATGAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATC TGATGTCAATCCTACTGAAGAAGCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTAC ATTTCAGTACCTCAAGGATAAGAAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAA ATTCACGAAAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCT GGACCCTGGAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGG TGATGCCGAGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGT TCTATCTATAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGA TGCTCTGTTTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAA CATGAGGCAAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTGAATGGAAGGGC CGCTGCATTGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGA AGCTTATTTTGGTGAAAAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGT TGATAATTTGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTT ACCAGCTATGAAAGATTTCCTATGGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTC AAGTTCTGAGGGTGATAAAGTTTCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGA AGATATTAATGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGG AAAAGCTACCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGT CGAAGAGCTTCCAGGCGATAGTAAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCC AAGAGCTAACACAAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGAC TTCCTCACCATCTGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGG AGTAACTGGAACTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCT CCTGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTA TCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAG TTTCAATGCTTTTAGTGATAAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAG ACCTTCTTTTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTT GGCAGTGAAATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATG TATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGA TCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATA TTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGATGAACACTTTTGCCGATGT CATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCC GCCATGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTC TGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCA CTCAGAATGCAAGTATACTATGGTTTCTGCGGTATTTCGTGCTGAGGGGCGAGATATCTG CCTTGCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGA ATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGAT AATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTA GACAACTGCTTACAGTTCTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGT AATCACCTTTTTAGTTAGAATACAGATAGCTTGATGACGCAAAGCTGAATTTTCTGTCAT GTACTGTCGATATGGCTTTCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTCTACTAC CAGATATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCACTACTTTTAGGATGA TATACCAGGTATCTTAATTACTTCGAAACAGCTTTTCTTG