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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0594800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22651496:22652160:1 gene:Os11g0594800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0594800-01)
Sequence

ATGGCATCCCAAATCATTGAGACGAACCGTGCTGGTGCCGAGATCATCAATGGCGATGCC
GCTGGCAAGAAGAAGTCCATTGAGCTGCTCCAGGAGCTAGGCCTTCCCAAGGGCCTCTTC
CCCTTGGACGACATCGAGGAGTTCGGCTACAACCGTGCAAACGGTTTCATGTGGATTCTT
CATAGCAAGAAGAAGGAACATACCTTCAAGAAGATCAAGCAGACCGTCTCCTACGCCACC
GAGGTGACGGCGTTCGTCGAAAAGGGGAAGCTGAAGAAGATTGCTGGTGTCAAGACCAAG
GAGCTGATGCTTTGGCTCAGTGTGGTTGAGGTCTATGTTGAGGAGTCATCTGCTGAGAAG
ATCACCTTCAAGACTGGCACTGGCCTCTCCGATAGCTTCGATGCGTCGGCCTTCGAGCTA
GGAATGTAG

Peptide Sequence

PEP ID

Os11t0594800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22651496:22652160:1 gene:Os11g0594800 transcript:Os11t0594800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0594800-01)
Sequence

MASQIIETNRAGAEIINGDAAGKKKSIELLQELGLPKGLFPLDDIEEFGYNRANGFMWIL
HSKKKEHTFKKIKQTVSYATEVTAFVEKGKLKKIAGVKTKELMLWLSVVEVYVEESSAEK
ITFKTGTGLSDSFDASAFELGM

Transcript Sequence

Transcript ID

Os11t0594800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22651496:22652160:1 gene:Os11g0594800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0594800-01)
Sequence

CATAGCTTCATAGCTCATACTAGTGATCACAACTTCACAAGCTCCAAACAAGCCATTCCT
ATTTCTCAACAGGCTAGATGGCATCCCAAATCATTGAGACGAACCGTGCTGGTGCCGAGA
TCATCAATGGCGATGCCGCTGGCAAGAAGAAGTCCATTGAGCTGCTCCAGGAGCTAGGCC
TTCCCAAGGGCCTCTTCCCCTTGGACGACATCGAGGAGTTCGGCTACAACCGTGCAAACG
GTTTCATGTGGATTCTTCATAGCAAGAAGAAGGAACATACCTTCAAGAAGATCAAGCAGA
CCGTCTCCTACGCCACCGAGGTGACGGCGTTCGTCGAAAAGGGGAAGCTGAAGAAGATTG
CTGGTGTCAAGACCAAGGAGCTGATGCTTTGGCTCAGTGTGGTTGAGGTCTATGTTGAGG
AGTCATCTGCTGAGAAGATCACCTTCAAGACTGGCACTGGCCTCTCCGATAGCTTCGATG
CGTCGGCCTTCGAGCTAGGAATGTAGAATAAACATTATCTAAACAAAAGGAATGTAAACT
GAAGAACTGAACATCCGAGGGAATTTATCTTCATTTTCTCTTTTAGTTTTCTTTTTACAT
ACAGTATGTAACTGTATTTCGCACGGAGAATATGTGATATTGGATTTATAAATAAGTGTT
GATGT