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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0594700-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:22649728:22650225:1 gene:Os11g0594700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0594700-00)
Sequence

ATGGCAGCTAAGATCATCGAGAGCCACCGTGTCGGTGCAGAGATCGCAAATGGTGACGAA
GCAGCCAAGAAGAAGTCCATTGAGCTTCTCTCTGAACTTGGCCTCCCAGAAGGGCTATTC
CCCTTGGACGATATGGAGGAGTTTGGGTATAACCGCGCAAACGGGTTCATGTGGATTGTT
CACAGGAAGAAGAAGGAGCACACCTTCAAGAAGATCAAGCAGACAGTCTCCTATGCCACC
GAGGTGACGGCATTCGTCGAAAAGGGGAAGCTGAAGAAGATTGCAGGGGTGAAGACCAAA
GAGCTGATGCTGTGGCTCAGTGTGGTTGAGGTCTATGTTGATGAGTCTTCTGCTGGGAAG
ATCACATTCAAGACTGGCACTGGCCTCTCCGATAGTTTTGATGCGTCGGCCTTCGAGTTA
GGAATGTAA

Peptide Sequence

PEP ID

Os11t0594700-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:22649728:22650225:1 gene:Os11g0594700 transcript:Os11t0594700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0594700-00)
Sequence

MAAKIIESHRVGAEIANGDEAAKKKSIELLSELGLPEGLFPLDDMEEFGYNRANGFMWIV
HRKKKEHTFKKIKQTVSYATEVTAFVEKGKLKKIAGVKTKELMLWLSVVEVYVDESSAGK
ITFKTGTGLSDSFDASAFELGM

Transcript Sequence

Transcript ID

Os11t0594700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22649728:22650225:1 gene:Os11g0594700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0594700-00)
Sequence

CATTTCATCACAACTTCAGAATCACACAGCCTCTCACAAAGCACTTAGACATCAAAAGAA
TTTGCTGAAATGGCAGCTAAGATCATCGAGAGCCACCGTGTCGGTGCAGAGATCGCAAAT
GGTGACGAAGCAGCCAAGAAGAAGTCCATTGAGCTTCTCTCTGAACTTGGCCTCCCAGAA
GGGCTATTCCCCTTGGACGATATGGAGGAGTTTGGGTATAACCGCGCAAACGGGTTCATG
TGGATTGTTCACAGGAAGAAGAAGGAGCACACCTTCAAGAAGATCAAGCAGACAGTCTCC
TATGCCACCGAGGTGACGGCATTCGTCGAAAAGGGGAAGCTGAAGAAGATTGCAGGGGTG
AAGACCAAAGAGCTGATGCTGTGGCTCAGTGTGGTTGAGGTCTATGTTGATGAGTCTTCT
GCTGGGAAGATCACATTCAAGACTGGCACTGGCCTCTCCGATAGTTTTGATGCGTCGGCC
TTCGAGTTAGGAATGTAA