Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0594200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22630975:22637777:1 gene:Os11g0594200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-189 description:Similar to Notchless gene homolog. (Os11t0594200-01)
Sequence

ATGGAGAACCGAGATCAGGAGGAGCCCGGCAGCGGCAGCGGCAGCGGAAGCGTGATGTGC
CAGCTCGTCAATCCCGAGGGAGACCACCTCGGCGCCGCCCTCTACCTGCCGCAGAACGTC
GGCCCGCCGCAGCTTCAGGAGATCGTCAACCATCTTCTCCACAACGAGGACAAGTTGCCC
TATGCATTCTACATCGGAGATGAAGAGCTATCTGTCCAGCTTGGTGCTTACATGCAGCAA
AAAAATGCAAATGTTGAGGTCACCCTGCGCATAGTATATCAACCACAAGCAGTTTTCCGC
ATCAGGCCAGTCAACCGATGCTCTGCTACAATTGCTGGCCATACAGAAGCCGTATTAGCT
GTCTCTTTCAGCCCTGATGGAAGATGTTTGGCTAGTGGTTCAGGTGACACCACTGTTCGG
TTTTGGGATCTGAACACGCAGACCCCATTGTTCACATGCAAAGGCCACAAAAACTGGGTG
CTCTGCATTGCATGGTCACCTGATGGGAACCATCTTGTTAGTGGAAGCAAGTCAGGGGAG
CTTATATTATGGGACCCAAAAACAGGCAAACAATTGGGCACTCCACTTACGGGGCATAGA
AAATGGATTACTGCTGTATCTTGGGAGCCAGTTCATTTGCAAGCTCCCTGCCGCCGTTTT
GTAAGTGCAAGTAAGGATGGTGACGCACGTATTTGGGATATTACCACAAGGAAGTGCGTT
ATTGCCCTTACAGGTCACACTAATTCGGTGACCTGTGTCAAGTGGGGTGGAGACGGTTTG
ATTTACACTGGTTCTGAAGATTGCTTAATCAAAGTCTGGGAAACTTCTCAGGGAAAGTTG
GTCAAAACACTGCAGGGTCATGGGCACTGGGTCAATTCACTTGCTTTGAGCACCGAGTAT
ATTTTGCGCACTGGGGCTTATGACCATACTGGCAAAACATATTCAACTGCAGATGAAATG
AAGGAGGCAGCCCTTGCAAGATACAAGAAGATGAGGGGCAATGCGCCTGAGAGACTAGTA
TCAGGTTCTGATGATTTTACTATGTTTCTCTGGGAACCAACAATTAGTAAACAGCCCAAA
GCTCGCATGACTGGTCATCAAAAGCTCGTAAACCATGTCTACTTCTCTCCTGATGGGCAG
TGGTTGGCCAGTGCCTCCTTTGACAAATCTGTCAAGTTATGGAACGGTATTACAGGCAAA
TTCGTTGCAGCTTTCAGAGGACATGTTGCAGATGTCTACCAGATCAGCTGGTCTGCCGAC
AGTAGGCTTCTACTCAGTGGAAGCAAGGATTCCACCCTAAAGGTTTGGGATATTCGAACA
CACAAGTTGAAACAGGACTTGCCAGGCCACGCAGATGAGGTGTATGCTGTGGATTGGAGC
CCTGACGGTGAGAAGGTTGCATCTGGTGGGAAAGACAGGGTCCTCAAGCTTTGGATGAAC
TAG

Peptide Sequence

PEP ID

Os11t0594200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22630975:22637777:1 gene:Os11g0594200 transcript:Os11t0594200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-189 description:Similar to Notchless gene homolog. (Os11t0594200-01)
Sequence

MENRDQEEPGSGSGSGSVMCQLVNPEGDHLGAALYLPQNVGPPQLQEIVNHLLHNEDKLP
YAFYIGDEELSVQLGAYMQQKNANVEVTLRIVYQPQAVFRIRPVNRCSATIAGHTEAVLA
VSFSPDGRCLASGSGDTTVRFWDLNTQTPLFTCKGHKNWVLCIAWSPDGNHLVSGSKSGE
LILWDPKTGKQLGTPLTGHRKWITAVSWEPVHLQAPCRRFVSASKDGDARIWDITTRKCV
IALTGHTNSVTCVKWGGDGLIYTGSEDCLIKVWETSQGKLVKTLQGHGHWVNSLALSTEY
ILRTGAYDHTGKTYSTADEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPK
ARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGITGKFVAAFRGHVADVYQISWSAD
SRLLLSGSKDSTLKVWDIRTHKLKQDLPGHADEVYAVDWSPDGEKVASGGKDRVLKLWMN

Transcript Sequence

Transcript ID

Os11t0594200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22630975:22637777:1 gene:Os11g0594200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-189 description:Similar to Notchless gene homolog. (Os11t0594200-01)
Sequence

CTCTCGAGTTCACCTGCCACCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGCTAC
TGGTGCCGGCCGCCGTCCTCCTGCTTCCGCCGCCGGGATTTCAGATGGAGAACCGAGATC
AGGAGGAGCCCGGCAGCGGCAGCGGCAGCGGAAGCGTGATGTGCCAGCTCGTCAATCCCG
AGGGAGACCACCTCGGCGCCGCCCTCTACCTGCCGCAGAACGTCGGCCCGCCGCAGCTTC
AGGAGATCGTCAACCATCTTCTCCACAACGAGGACAAGTTGCCCTATGCATTCTACATCG
GAGATGAAGAGCTATCTGTCCAGCTTGGTGCTTACATGCAGCAAAAAAATGCAAATGTTG
AGGTCACCCTGCGCATAGTATATCAACCACAAGCAGTTTTCCGCATCAGGCCAGTCAACC
GATGCTCTGCTACAATTGCTGGCCATACAGAAGCCGTATTAGCTGTCTCTTTCAGCCCTG
ATGGAAGATGTTTGGCTAGTGGTTCAGGTGACACCACTGTTCGGTTTTGGGATCTGAACA
CGCAGACCCCATTGTTCACATGCAAAGGCCACAAAAACTGGGTGCTCTGCATTGCATGGT
CACCTGATGGGAACCATCTTGTTAGTGGAAGCAAGTCAGGGGAGCTTATATTATGGGACC
CAAAAACAGGCAAACAATTGGGCACTCCACTTACGGGGCATAGAAAATGGATTACTGCTG
TATCTTGGGAGCCAGTTCATTTGCAAGCTCCCTGCCGCCGTTTTGTAAGTGCAAGTAAGG
ATGGTGACGCACGTATTTGGGATATTACCACAAGGAAGTGCGTTATTGCCCTTACAGGTC
ACACTAATTCGGTGACCTGTGTCAAGTGGGGTGGAGACGGTTTGATTTACACTGGTTCTG
AAGATTGCTTAATCAAAGTCTGGGAAACTTCTCAGGGAAAGTTGGTCAAAACACTGCAGG
GTCATGGGCACTGGGTCAATTCACTTGCTTTGAGCACCGAGTATATTTTGCGCACTGGGG
CTTATGACCATACTGGCAAAACATATTCAACTGCAGATGAAATGAAGGAGGCAGCCCTTG
CAAGATACAAGAAGATGAGGGGCAATGCGCCTGAGAGACTAGTATCAGGTTCTGATGATT
TTACTATGTTTCTCTGGGAACCAACAATTAGTAAACAGCCCAAAGCTCGCATGACTGGTC
ATCAAAAGCTCGTAAACCATGTCTACTTCTCTCCTGATGGGCAGTGGTTGGCCAGTGCCT
CCTTTGACAAATCTGTCAAGTTATGGAACGGTATTACAGGCAAATTCGTTGCAGCTTTCA
GAGGACATGTTGCAGATGTCTACCAGATCAGCTGGTCTGCCGACAGTAGGCTTCTACTCA
GTGGAAGCAAGGATTCCACCCTAAAGGTTTGGGATATTCGAACACACAAGTTGAAACAGG
ACTTGCCAGGCCACGCAGATGAGGTGTATGCTGTGGATTGGAGCCCTGACGGTGAGAAGG
TTGCATCTGGTGGGAAAGACAGGGTCCTCAAGCTTTGGATGAACTAGGGCCGGCTGATTC
TTCTGACCACCCGTTAAGCTTGTTCTCATGGTGGCACTAAACATTGAACTCATCAATCGG
TCACAAAGTCGGAAGCTGGGAGTAGATCATGGCGGTTAACTTGCAAGGTTGTTCAAGAGG
AGATTGATTACCTAGGAAGGACATACATTCAAACCATACTCCATGAAGTCAACATGCAAT
TCCCAATTTGTTGGAGCAATCACAACCGATTTCAGTTCAATGATTTGAAGGGATGTGAGC
GCCATGGAAATGCAAGTTCTTCCCATGGCTGGCCACCCAAAATAGGATTTACTTACATCG
GTCAGGCTAGCTGTTAGAGACTTTTTAGAGGCCATATCACCGAACATGCAAAGGAAAACC
ACCATGATCAGCAAACAGTTGTTCCTGTCCTCACATCCTGCAGTCTGCAGATAGTCTGGG
TTTGGGCATATGTAATCATAGGATGAGTCTCCTTTGCTGTATTGCGATCTGACACGGGTC
ACTGACATATGGGCCCATTGGTTTTGGGGATATATGTCAGCCACTGAAAGTTAGAGGATC
TGATTCCATAATC