Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0593100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22577889:22579413:1 gene:Os11g0593100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0718 description:Protein of unknown function DUF295 family protein. (Os11t0593100-01)
Sequence

ATGAAGATGAGGGCGGCGGTGGCCGACGGCGACGGCGACGACGACGGCGCCGGCGCGCCC
GTCCAAGTCAGCGTGGACCCCGCCGCCTACCGGGACTGGTCCGCGCTCCCGGCCGACCTG
CTGCTCACGGTGATGGAGTCGCTCGCCATCCCCGACCTCTTCCGCGCCGGGACCGCCTGC
GCCTCCTGGTACGCCGCCTACTCCATCGCCCGCCGCGCCCGTATCCCCATACGGGATTCG
GCTCCGTGCTTGCTCTACTCCGGCGAAGGCGACGACGACCCCAGCAAGGCCACCCTGTAC
AGCCCCTCGAGCGGGGACTGCTTCCGCGTGCGGCTCCCGGACCCGCCGCTCCGGAGCCGC
AACCTCGTCGGCTCAGCGCACGGCTGGCTCGTCACCGCCGACGAGCAATCCAACCTCCAC
CTCGTGAACCCGCTCAACGGCGCGCAGGTCGCGCTCCCGCCCGTCACGGCCCTCCACCAT
GTGGAGAGCTTCGTGGACGAGGAAGGGAACATAGTGTATAGTGTTGATGAGTCTCTGGGG
CCCGACGATCCAGAAGCCAATCTCCCCGAATTCGAGGAGCTCGCCGACCGGGAAGTCCCC
GTGGAATACCCTGCGGAGAAGCTGCGCCTGTTCATGTACCACAGGGTGATTCTATCCTGC
AGCCCATCCGTGGGGAGGGAATGTGTTGCCCTGCTGGTGCACAGACCGGATGGGATGATC
TCCTTCGCCCGACCGGGCGACGAGAGATGGACCCATATCAACCGGACAACGAGCAATGGA
TCGCTCAAATGGGATACCGGCTATACCGATGCGCTTTACAACAAGAATGATGGCTTGTTC
TACCTGTTGAGCTTTGACGGTTCTATATGCGCGTTGGATCTAAGTGGGTCAAGTCCAGTT
GCGAGGAACATTGTGAAGAAAAATACACAGTGGGATAATCCTAGCAAATACATTGTGCTG
GCACCATGGGGCGATCTCTTGGAGGTGTGGAGGTTGAGAGACTTTGATGAACCTGATGAA
ACTCCTGAATGTTCTTCTGCTGAGTTTGAGGATCGATCTGATAAGTGGTTAACAGAAGAA
ATTATGCTATATAAAGTTGATATCGATAAGCAGAAACTTGTTAAGATAAGCAGCATCGGG
GATTATGCTCTGTTCCTTGGTTTCAATTCTGTGGTGTGCCTTCCAACAGAGAATTTTCCT
ATGTTAAAACCTGATTGTGCTTATCTTTCTGATGAATTTTATGAAGAAATATGTGTCAAG
AGGCATAACTGGCGAGAAATAGGCATTTGGGATTTGAAAAATTGCAAACTGCAGAGCCTT
GGTGATGTGGAGTCTCTTCATGCTTGGCGTAATTGGCCATCGCCTATTTGGATAACACCA
TCTCTTAGTTAG

Peptide Sequence

PEP ID

Os11t0593100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22577889:22579413:1 gene:Os11g0593100 transcript:Os11t0593100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0718 description:Protein of unknown function DUF295 family protein. (Os11t0593100-01)
Sequence

MKMRAAVADGDGDDDGAGAPVQVSVDPAAYRDWSALPADLLLTVMESLAIPDLFRAGTAC
ASWYAAYSIARRARIPIRDSAPCLLYSGEGDDDPSKATLYSPSSGDCFRVRLPDPPLRSR
NLVGSAHGWLVTADEQSNLHLVNPLNGAQVALPPVTALHHVESFVDEEGNIVYSVDESLG
PDDPEANLPEFEELADREVPVEYPAEKLRLFMYHRVILSCSPSVGRECVALLVHRPDGMI
SFARPGDERWTHINRTTSNGSLKWDTGYTDALYNKNDGLFYLLSFDGSICALDLSGSSPV
ARNIVKKNTQWDNPSKYIVLAPWGDLLEVWRLRDFDEPDETPECSSAEFEDRSDKWLTEE
IMLYKVDIDKQKLVKISSIGDYALFLGFNSVVCLPTENFPMLKPDCAYLSDEFYEEICVK
RHNWREIGIWDLKNCKLQSLGDVESLHAWRNWPSPIWITPSLS

Transcript Sequence

Transcript ID

Os11t0593100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22577889:22579413:1 gene:Os11g0593100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0718 description:Protein of unknown function DUF295 family protein. (Os11t0593100-01)
Sequence

AATTCCCAAATTCTAGGGTTCGCCTCTTGCACCGCCACGCATCAGGAGCACACGCCCACA
TGAAGATGAGGGCGGCGGTGGCCGACGGCGACGGCGACGACGACGGCGCCGGCGCGCCCG
TCCAAGTCAGCGTGGACCCCGCCGCCTACCGGGACTGGTCCGCGCTCCCGGCCGACCTGC
TGCTCACGGTGATGGAGTCGCTCGCCATCCCCGACCTCTTCCGCGCCGGGACCGCCTGCG
CCTCCTGGTACGCCGCCTACTCCATCGCCCGCCGCGCCCGTATCCCCATACGGGATTCGG
CTCCGTGCTTGCTCTACTCCGGCGAAGGCGACGACGACCCCAGCAAGGCCACCCTGTACA
GCCCCTCGAGCGGGGACTGCTTCCGCGTGCGGCTCCCGGACCCGCCGCTCCGGAGCCGCA
ACCTCGTCGGCTCAGCGCACGGCTGGCTCGTCACCGCCGACGAGCAATCCAACCTCCACC
TCGTGAACCCGCTCAACGGCGCGCAGGTCGCGCTCCCGCCCGTCACGGCCCTCCACCATG
TGGAGAGCTTCGTGGACGAGGAAGGGAACATAGTGTATAGTGTTGATGAGTCTCTGGGGC
CCGACGATCCAGAAGCCAATCTCCCCGAATTCGAGGAGCTCGCCGACCGGGAAGTCCCCG
TGGAATACCCTGCGGAGAAGCTGCGCCTGTTCATGTACCACAGGGTGATTCTATCCTGCA
GCCCATCCGTGGGGAGGGAATGTGTTGCCCTGCTGGTGCACAGACCGGATGGGATGATCT
CCTTCGCCCGACCGGGCGACGAGAGATGGACCCATATCAACCGGACAACGAGCAATGGAT
CGCTCAAATGGGATACCGGCTATACCGATGCGCTTTACAACAAGAATGATGGCTTGTTCT
ACCTGTTGAGCTTTGACGGTTCTATATGCGCGTTGGATCTAAGTGGGTCAAGTCCAGTTG
CGAGGAACATTGTGAAGAAAAATACACAGTGGGATAATCCTAGCAAATACATTGTGCTGG
CACCATGGGGCGATCTCTTGGAGGTGTGGAGGTTGAGAGACTTTGATGAACCTGATGAAA
CTCCTGAATGTTCTTCTGCTGAGTTTGAGGATCGATCTGATAAGTGGTTAACAGAAGAAA
TTATGCTATATAAAGTTGATATCGATAAGCAGAAACTTGTTAAGATAAGCAGCATCGGGG
ATTATGCTCTGTTCCTTGGTTTCAATTCTGTGGTGTGCCTTCCAACAGAGAATTTTCCTA
TGTTAAAACCTGATTGTGCTTATCTTTCTGATGAATTTTATGAAGAAATATGTGTCAAGA
GGCATAACTGGCGAGAAATAGGCATTTGGGATTTGAAAAATTGCAAACTGCAGAGCCTTG
GTGATGTGGAGTCTCTTCATGCTTGGCGTAATTGGCCATCGCCTATTTGGATAACACCAT
CTCTTAGTTAGAAAGATGTGGGAGATTTTCATGTATTAGGAGCTCCAATATGGATATCAT
TAATCGAAAAGAGAGATTTATGATG