Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0592900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22566058:22568588:-1 gene:Os11g0592900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os11t0592900-01)
Sequence

ATGGGCGCCGCCGCGAAGCCCCCACCCTTCGTCTGCTTCAAGTGGCCATGGGGCCCCGAC
CCCAAGGCAACGAGCCCTAGCCCTAGCCCGAGCCCCTGCGGCGACCTCGAGATGCCCTGG
CTGCTCAAGTCCATCCGCACCGTGGCGCAGGGCCTCCTCATCGCCGGCGACCTCCCCTCC
CCCTCGTCGGACGGGGGAGGAGGCGGCGGTGGGGCGAGGACGAGGTGGAGGAGGAGGAGG
CGGCTGGGCCCTGGGCTGGCGGCGGAGGCGGACCGCGGGGAGGCGGAGCAGCGGGCGCTC
GCGGCAGCGCTGGCGAGCGGGAGGGACGCGACCGTGCTGGAGTTCTACTCGCCCCGGTGC
CGCCTGTGCTCGTCGCTGCAGGGGCTCGTGCGCGAGCTCGAGGACGGCGCAGGCGGGCGG
GCCGGCTTCGTGCTCGCCGACGCCGAGGACGACCGGTGGCTCCCCGAGCTTCTGCATTAC
GACATCAGATATGTCCCGTGCTTTGTGCTTCTTGACAAGAATGGACGAGCCTTAGCAAAG
ACTGGCGTACCGACTAGCAGGCAGCACGTCATCGCTGGCCTTCATCACCTTCTTAACATG
AATCAGATATCTGTGCAAGAAGGAACGAAGAGCACGGCATGA

Peptide Sequence

PEP ID

Os11t0592900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22566058:22568588:-1 gene:Os11g0592900 transcript:Os11t0592900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os11t0592900-01)
Sequence

MGAAAKPPPFVCFKWPWGPDPKATSPSPSPSPCGDLEMPWLLKSIRTVAQGLLIAGDLPS
PSSDGGGGGGGARTRWRRRRRLGPGLAAEADRGEAEQRALAAALASGRDATVLEFYSPRC
RLCSSLQGLVRELEDGAGGRAGFVLADAEDDRWLPELLHYDIRYVPCFVLLDKNGRALAK
TGVPTSRQHVIAGLHHLLNMNQISVQEGTKSTA

Transcript Sequence

Transcript ID

Os11t0592900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22566058:22568588:-1 gene:Os11g0592900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os11t0592900-01)
Sequence

GCGCGGTCCATTCATCAACCCACGTCATCGCCCAATCCGCAGCCGCCGCCGCCTCGCCGG
CGCTTCCCTCGCCGGAGAGGATGGGCGCCGCCGCGAAGCCCCCACCCTTCGTCTGCTTCA
AGTGGCCATGGGGCCCCGACCCCAAGGCAACGAGCCCTAGCCCTAGCCCGAGCCCCTGCG
GCGACCTCGAGATGCCCTGGCTGCTCAAGTCCATCCGCACCGTGGCGCAGGGCCTCCTCA
TCGCCGGCGACCTCCCCTCCCCCTCGTCGGACGGGGGAGGAGGCGGCGGTGGGGCGAGGA
CGAGGTGGAGGAGGAGGAGGCGGCTGGGCCCTGGGCTGGCGGCGGAGGCGGACCGCGGGG
AGGCGGAGCAGCGGGCGCTCGCGGCAGCGCTGGCGAGCGGGAGGGACGCGACCGTGCTGG
AGTTCTACTCGCCCCGGTGCCGCCTGTGCTCGTCGCTGCAGGGGCTCGTGCGCGAGCTCG
AGGACGGCGCAGGCGGGCGGGCCGGCTTCGTGCTCGCCGACGCCGAGGACGACCGGTGGC
TCCCCGAGCTTCTGCATTACGACATCAGATATGTCCCGTGCTTTGTGCTTCTTGACAAGA
ATGGACGAGCCTTAGCAAAGACTGGCGTACCGACTAGCAGGCAGCACGTCATCGCTGGCC
TTCATCACCTTCTTAACATGAATCAGATATCTGTGCAAGAAGGAACGAAGAGCACGGCAT
GATGAAGTTCCTTACTTCCTTGAGCAAGTCATGTAATTGTTGATAAGAGTGTCAGAATTC
AGATAGTGCATGGTTACCAAGCATGACGATCAACAATGCTGAAAAAATCTTATTTCTTTT
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