Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0592500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22533907:22537548:1 gene:Os11g0592500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os11t0592500-01);Conserved hypothetical protein. (Os11t0592500-02)
Sequence

ATGAAGGAGGTGCGGGAGCTGTGCTACGACATCGACGACTTTGTTGATGAGCTTTTCCAT
GCTGCCGCTAATGCCAAGATCCAAAGAGCTCTCCAGTTTAAGGCTTCTCCACTCCGGAAG
AAATTGCCCCTCTTTAAGACTTCTCAGCTCCAGGAGAAGTTATCCCGCTTCAACGCTTCT
CAGCTCCAGAAGAAATTGTCATGGAGGCAAAAAATTGTTGATGAGGTCTCAAGTTTCAGT
TCTTGCTTGAAGGAATTGATTATGCTTTATAAGCGTTATGATCTTGGTAGTTTAGAGAGA
CGTTCCGGGTGGGAATCAAATGGAACAATGTCTTTAACTCTCCCGTTAGCTGAAGAGACC
AGCCAACGCTGCTACCTCGGTATGGACAAAGATATGGATAAACTTGTTGGGTTACTAAAT
GATGGGCAGCAAGAATGCAAGGTCATTGCTATCATTGGACTTTGTGGTGTTGGCAAGACC
ACCCTTGCTGAAGAACTTTATCAGAAGTTTGGATTTCAGTTTCAATGTTGTGCCTTTCTA
AGGTTATCTCGGAAACCTGACATGAAGAGGGTGCTCGGTAGTTTATTCTCACAAGTTCGG
CAGCATGATCCTCCTGGTACTGGTACTGTTGAGGTGGATAATTTATCCCATGAGATCAAG
TCATATCTGAATGACAAAAGGTATTTTATTGTAATTGATGGTGTTTGGTCATCATATATA
TGGAACACTATCAATCAGACTTTGCCAAAGAATTTTTACAGTAGAATATTGATAACTACA
GAAATTGATCATGTAGCTCAGAGGTGCTGTGTTGATAACCGCAAATACATCTTTAAGAAG
GAACCATTTAATAAAGTTGAATCTGATGAATTCTTCAGCAGAGTCCATGAATATCTAAAG
GAAATTTCTTCTGAGATTGCACAACTCTTTAGTGGCTTACCGCTCATGATGGCTATTGTA
GCTAGTATTTTAACACGATTGCCACCAAGCACAGAGCAATGGAATGTTGTAAAAAAAATC
ATTAAGTTCTAA

Peptide Sequence

PEP ID

Os11t0592500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22533907:22537548:1 gene:Os11g0592500 transcript:Os11t0592500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os11t0592500-01);Conserved hypothetical protein. (Os11t0592500-02)
Sequence

MKEVRELCYDIDDFVDELFHAAANAKIQRALQFKASPLRKKLPLFKTSQLQEKLSRFNAS
QLQKKLSWRQKIVDEVSSFSSCLKELIMLYKRYDLGSLERRSGWESNGTMSLTLPLAEET
SQRCYLGMDKDMDKLVGLLNDGQQECKVIAIIGLCGVGKTTLAEELYQKFGFQFQCCAFL
RLSRKPDMKRVLGSLFSQVRQHDPPGTGTVEVDNLSHEIKSYLNDKRYFIVIDGVWSSYI
WNTINQTLPKNFYSRILITTEIDHVAQRCCVDNRKYIFKKEPFNKVESDEFFSRVHEYLK
EISSEIAQLFSGLPLMMAIVASILTRLPPSTEQWNVVKKIIKF

Transcript Sequence

Transcript ID

Os11t0592500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22533907:22537548:1 gene:Os11g0592500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os11t0592500-01);Conserved hypothetical protein. (Os11t0592500-02)
Sequence

GGTCGTGGACGCGGCGCGGCGTCGGATTCTTCCGTACTTCCGTCTCGAGCGACGCCGCCG
GCGACAACCGCTTCCTCGCGACCTCCCGCCGCCGGCGAGGAAACCTCGTCTTGGTCCTCC
AAGTTCAAGGTATCGATAGCTATGGGATAATCCCGAATTCCCGATCGATTTCGATTCTAT
TTGCATGTGTTGGGAAGATGGAGAGGGGTGGGGAGATGGATCCTCCCATCACTGCCTCGC
TGGGAGCCATTCATATTGTTTTTGGGAAACTGGTCCGGTTGCTCTCCGAGCCTGGACTGC
GGCTGCACAAGGAAGAGATGAAAGCGCTAGGTGTGCTCAAAGACGGCCTCCAAGTTTTGA
TAGAAGATTATCTGATGGAACCATCAGATCTGGAGGGCCCTCCCTTCTAGGCTAACTACT
GGATGAAGGAGGTGCGGGAGCTGTGCTACGACATCGACGACTTTGTTGATGAGCTTTTCC
ATGCTGCCGCTAATGCCAAGATCCAAAGAGCTCTCCAGTTTAAGGCTTCTCCACTCCGGA
AGAAATTGCCCCTCTTTAAGACTTCTCAGCTCCAGGAGAAGTTATCCCGCTTCAACGCTT
CTCAGCTCCAGAAGAAATTGTCATGGAGGCAAAAAATTGTTGATGAGGTCTCAAGTTTCA
GTTCTTGCTTGAAGGAATTGATTATGCTTTATAAGCGTTATGATCTTGGTAGTTTAGAGA
GACGTTCCGGGTGGGAATCAAATGGAACAATGTCTTTAACTCTCCCGTTAGCTGAAGAGA
CCAGCCAACGCTGCTACCTCGGTATGGACAAAGATATGGATAAACTTGTTGGGTTACTAA
ATGATGGGCAGCAAGAATGCAAGGTCATTGCTATCATTGGACTTTGTGGTGTTGGCAAGA
CCACCCTTGCTGAAGAACTTTATCAGAAGTTTGGATTTCAGTTTCAATGTTGTGCCTTTC
TAAGGTTATCTCGGAAACCTGACATGAAGAGGGTGCTCGGTAGTTTATTCTCACAAGTTC
GGCAGCATGATCCTCCTGGTACTGGTACTGTTGAGGTGGATAATTTATCCCATGAGATCA
AGTCATATCTGAATGACAAAAGGTATTTTATTGTAATTGATGGTGTTTGGTCATCATATA
TATGGAACACTATCAATCAGACTTTGCCAAAGAATTTTTACAGTAGAATATTGATAACTA
CAGAAATTGATCATGTAGCTCAGAGGTGCTGTGTTGATAACCGCAAATACATCTTTAAGA
AGGAACCATTTAATAAAGTTGAATCTGATGAATTCTTCAGCAGAGTCCATGAATATCTAA
AGGAAATTTCTTCTGAGATTGCACAACTCTTTAGTGGCTTACCGCTCATGATGGCTATTG
TAGCTAGTATTTTAACACGATTGCCACCAAGCACAGAGCAATGGAATGTTGTAAAAAAAA
TCATTAAGTTCTAAATTGGAAGGGATTTTGGACCTCATTTACAATATTATTCCTCATCCT
TTGAAAGCCTGCATGCTTTATCTCGGAATATATGAAGAAGACGATATAATTTTAAAAGAT
GAACTGTTGAGTCAATGGTTTGCAGAAGGATTTATTGATACAGTTGATGGAAATGATGAG
AAGAGGGTGGCATTGATCTATTTTGATTAGCTTATCAGCTATGGGCTAATACAACCTGTA
GAGACCAGGTTTGATAATGAAGTGTTGTCCTTTAGAGTGCATTACATGATAATTGATTCT
ATTCGGTCTAAGGCAGTCCAGCACAATTTTGCCATTGCAATTGATAATCATCAGACAGAT
GTGCGAATTGCTGATAAGATTCGTCGGTTGTCCCTTCGTTTTGGCAATGCAAATGATGTG
ACAACACCAATTGGGTTGAGATGGTCACAAGTTCGCACGCTTGTCTTTTTTGGACCTCTC
CGCTGTACACCTTCTATTGCTGAGTTTAGAGTTCTTCGAGTTTTGATCCTTCGATTATCT
GCTGATGATGATGATGTAACTTATGACCTCTCAGAAATTGCTGAGTTGCTTGGATTAAAG
TATCTGTATATTGATGCATGCCATCTGAATATAAGGCTACCAATGCAGATGCGACAGTTG
CAATATTTGGCAAAGTTAAAAATAGAAGCAAGATTGAGTTATGTTCCATCAGATATTTTT
TATTTGCCACGATTGCAACAGTTGATTCTTCCAAGTGAGACTACTTTGCCCCATTTCACT
GAGCCGATGAAGTCTCTTCATACTTTAGGGTGTTTTGATCTCAGCGGGAGCTCAACAGAA
AGTATTGTGGATCTTGGGAAGATGGTAAATCTTCAAAATCTTCACATGACATGTTCTAGT
GGACAGCCTGCCAATCTGAAACTTCTAGGGTCTGTTCTCAATAAACTCAAAAACATGAAG
TCTCTAATTCTGGTATTTACTGGTTCATTGGATGATGCTGATTCTTCAATTATGGAAATT
TCTTCTGATGACTTCAGTGTTTCATCTCCTCCGGTTCTTCTGACAAGGTTTGAATTTTCA
TGGCGCTCATGCATATTTTCATGCCTACCTAGGTGAATCAAAGAACTGAACAATCTCAGT
ATCTTGAAGATTGCCATTAGTGAGATGTTGGGACATGATGTTGATGTTCTTAGTGTGTTA
CCTGCACTCACTTCTCTCTCTGTGTATATCCAAAGAGCACCTGAGGAAAGGATCAGTTTT
GGTAAAGGAGGATTCGTAGCTTTGAAGTACTTTAAACTCAAGTGCACTGTACCTTGGCTC
AAAGTTGAGGTAGATGCAATGCCTAATCTTGAAAAACTGAAGCTAAGGTTCAATGTTGGT
CTCAGTCTGCAAAGAGTGGGTCTGCATGGCAATAACCTTATCAACATTGAGCACTTGTCA
AGGCTTAAGGAGATATATGCAAAAGTGGAGAGTGAAGGTTCTGTTGATGCAGGGTCTGCT
TTGATGACTGGTGTTTGGAATGATCCAAGAAATCCTACAATTACCATTCAATTGATTTGT
GGTTTCTATGGTGAAATGACTAGACTGATGACAAAAGATGATATTATCTTGGAAGAAAAT
CCAGACAGCATAACTGAGGATGAGGTCAGACAGAAGGATGAGAAGAAACAAGTGGATGAT
CACAGGTTTCAATTTTTCGCTTCTTTACTTTGGTTTCACTTTTTGAACCTAATTACTCGT
GTAATTCCTATTATAATGCAGCTAATTGGTGTTGTAATT