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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0592300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22514191:22516597:-1 gene:Os11g0592300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 8 protein. (Os11t0592300-01)
Sequence

AGAATCAAGGAGATAGAGAGGGTGATAAGCCACTTTAGCAGCAGTTCCCGTGTACCCACG
AGTGCACTGCAGAAAATTAGGGCAATGGAAATGACCCTATCTAAAGCTCAAAGAGCCTAC
CCACATTGTTCTCATATGACAGCAAAGTTACGTGCAATGACACATCAAAGCGAAGAGTTG
GTCAGAGCCCATCGAAGCGAAACTTCATTCCTTGAGCAGGTTGCAGTGAGGACATTACCA
AAAAGCCATCACTGCCTAGCAATGCGACTTACCTCAGAATACTTCCTGTTAGATCCGAAG
GAACGTGAATTTCCTCAAAGATACACAATGCAGATGGGTGACCTTTACCATTATGCAATA
TTCTCAGACAATGTGCTAGCGAGTGCAGTGGTTGTCAACTCTACAATTTCTGCATCTAAG
GATCCCAAAAGGATAATGTTTCATATTGTGACTGATGCACTGAATTTTCCTGCAATGATG
ATGTGGTTTCTGACAAACCCACCAAATCCAGCCACAATTCAAATCAAGAGCTTAGATAAT
TTGAAATGGCTGCCAGCTGATTTCAGTTTCAGATTTAAGCAGAAGGGCATCCGAGATCCA
AGATACACTTCTGCGCTTAACCACTTGCGCTTTTATTTGCCAGAAGTATTCCCTTCTCTG
AACAAACTTGTACTCTTGGACCATGACATTGTAGTCCAAAGAGACTTGAGTGGATTATGG
CAGATAGATTTGAATGGTAAAGTAAATGGTGCTGTTGAGACGTGCACTTCTGGTGATGGT
TATCATCGGTTGGAGAACCTTGTTAATTTCTCTGATCCAAGTATCATCAACAAATTTGAT
GCAAAGGCTTGCATACATGCATTTGGGATGAACATCTTTGACCTTAAGGAATGGCGCAGG
CAGGGGCTGACTACTGCTTATAATAAGTGGTTTCAAGCTGGCAAAAGGCGGAGACTATGG
AAAGCAGGGAGCTTGCCACTGGGCCAGATTGTCTTCTACAATCAAACAGTGCCTCTTGAC
CACCGGTGGCATGTTCTTGGGCTTGGTCATGACAGAAGCATAGGAAGAGATGCAATTGAG
AGGGCCGCCGTGATCCACTACAGCGGAAAACTCAAACCCTGGCTGGAGATCTCCATTCCC
AAGTACAGAGATTATTGGAACAATTTCCTTGACTATGACAACCCATACTTGCAGCAGTGC
AACATTCACATGTAG

Peptide Sequence

PEP ID

Os11t0592300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22514191:22516597:-1 gene:Os11g0592300 transcript:Os11t0592300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 8 protein. (Os11t0592300-01)
Sequence

RIKEIERVISHFSSSSRVPTSALQKIRAMEMTLSKAQRAYPHCSHMTAKLRAMTHQSEEL
VRAHRSETSFLEQVAVRTLPKSHHCLAMRLTSEYFLLDPKEREFPQRYTMQMGDLYHYAI
FSDNVLASAVVVNSTISASKDPKRIMFHIVTDALNFPAMMMWFLTNPPNPATIQIKSLDN
LKWLPADFSFRFKQKGIRDPRYTSALNHLRFYLPEVFPSLNKLVLLDHDIVVQRDLSGLW
QIDLNGKVNGAVETCTSGDGYHRLENLVNFSDPSIINKFDAKACIHAFGMNIFDLKEWRR
QGLTTAYNKWFQAGKRRRLWKAGSLPLGQIVFYNQTVPLDHRWHVLGLGHDRSIGRDAIE
RAAVIHYSGKLKPWLEISIPKYRDYWNNFLDYDNPYLQQCNIHM

Transcript Sequence

Transcript ID

Os11t0592300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22514191:22516597:-1 gene:Os11g0592300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 8 protein. (Os11t0592300-01)
Sequence

TGAGAATCAAGGAGATAGAGAGGGTGATAAGCCACTTTAGCAGCAGTTCCCGTGTACCCA
CGAGTGCACTGCAGAAAATTAGGGCAATGGAAATGACCCTATCTAAAGCTCAAAGAGCCT
ACCCACATTGTTCTCATATGACAGCAAAGTTACGTGCAATGACACATCAAAGCGAAGAGT
TGGTCAGAGCCCATCGAAGCGAAACTTCATTCCTTGAGCAGGTTGCAGTGAGGACATTAC
CAAAAAGCCATCACTGCCTAGCAATGCGACTTACCTCAGAATACTTCCTGTTAGATCCGA
AGGAACGTGAATTTCCTCAAAGATACACAATGCAGATGGGTGACCTTTACCATTATGCAA
TATTCTCAGACAATGTGCTAGCGAGTGCAGTGGTTGTCAACTCTACAATTTCTGCATCTA
AGGATCCCAAAAGGATAATGTTTCATATTGTGACTGATGCACTGAATTTTCCTGCAATGA
TGATGTGGTTTCTGACAAACCCACCAAATCCAGCCACAATTCAAATCAAGAGCTTAGATA
ATTTGAAATGGCTGCCAGCTGATTTCAGTTTCAGATTTAAGCAGAAGGGCATCCGAGATC
CAAGATACACTTCTGCGCTTAACCACTTGCGCTTTTATTTGCCAGAAGTATTCCCTTCTC
TGAACAAACTTGTACTCTTGGACCATGACATTGTAGTCCAAAGAGACTTGAGTGGATTAT
GGCAGATAGATTTGAATGGTAAAGTAAATGGTGCTGTTGAGACGTGCACTTCTGGTGATG
GTTATCATCGGTTGGAGAACCTTGTTAATTTCTCTGATCCAAGTATCATCAACAAATTTG
ATGCAAAGGCTTGCATACATGCATTTGGGATGAACATCTTTGACCTTAAGGAATGGCGCA
GGCAGGGGCTGACTACTGCTTATAATAAGTGGTTTCAAGCTGGCAAAAGGCGGAGACTAT
GGAAAGCAGGGAGCTTGCCACTGGGCCAGATTGTCTTCTACAATCAAACAGTGCCTCTTG
ACCACCGGTGGCATGTTCTTGGGCTTGGTCATGACAGAAGCATAGGAAGAGATGCAATTG
AGAGGGCCGCCGTGATCCACTACAGCGGAAAACTCAAACCCTGGCTGGAGATCTCCATTC
CCAAGTACAGAGATTATTGGAACAATTTCCTTGACTATGACAACCCATACTTGCAGCAGT
GCAACATTCACATGTAGAAGCAGTAGAAGCTAGAAGATTCACACAATGGCCCATGAATAC
ACGGTTTTTGCAATACGTACGTAGTAAGCTAATCTTATTCATTCTTTTTGTAGATTTAGC
AAGCATCTTGTTCTATACTCAGTTGTACCCGCACATTGTTAGCCACTTGTTAAAAAAAAT
GTGCAAAAGGAAGAAAAGGCATGGTTAAAT