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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0592100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22505993:22507412:1 gene:Os11g0592100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 4B description:Similar to Barwin. (Os11t0592100-01)
Sequence

ATGATGGTCATGGCGATGATGAGAAGGGTGGTGATGGTGGTGGCGGTGCTGTGTGCGGTA
GCAACTATGGCCATGGCACAAGAGGCGTCCAACGTGCGTGCCACGTACCACTACTACCGT
CCGGCGGAAAACAATTGGGATTTGGGGGCCCCGGCCGTTAGCGCGTACTGTGCCACGTGG
GATGCTGACAAGCCGCTTGAATGGCGCCAGAAGTATGGATGGACCGCCTTCTGTGGGCCC
GTTGGTCCCACTGGTCAGGATGCATGTGGCAAATGTCTCTCGGTGACGAACACGGCGACA
GGGGATCAGATCACGGCGAGGATCGTGGACCAGTGCGCCAATGGGGGGCTGGATTTAGAC
TGGGACACCGTCTTCTCCAAGATCGACAGCGACGGTCAAGGCTACCAGAATGGCCACCTC
ATCGTCGACTACCAGTTCGTCGACTGCGGCGATAACTAG

Peptide Sequence

PEP ID

Os11t0592100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22505993:22507412:1 gene:Os11g0592100 transcript:Os11t0592100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 4B description:Similar to Barwin. (Os11t0592100-01)
Sequence

MMVMAMMRRVVMVVAVLCAVATMAMAQEASNVRATYHYYRPAENNWDLGAPAVSAYCATW
DADKPLEWRQKYGWTAFCGPVGPTGQDACGKCLSVTNTATGDQITARIVDQCANGGLDLD
WDTVFSKIDSDGQGYQNGHLIVDYQFVDCGDN

Transcript Sequence

Transcript ID

Os11t0592100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22505993:22507412:1 gene:Os11g0592100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 4B description:Similar to Barwin. (Os11t0592100-01)
Sequence

ATTTCACTAGCATCTAGCAAGTGCACAACACATCTATAAATCGTAGTAACCACCTTAGGT
GAGATGATGGTCATGGCGATGATGAGAAGGGTGGTGATGGTGGTGGCGGTGCTGTGTGCG
GTAGCAACTATGGCCATGGCACAAGAGGCGTCCAACGTGCGTGCCACGTACCACTACTAC
CGTCCGGCGGAAAACAATTGGGATTTGGGGGCCCCGGCCGTTAGCGCGTACTGTGCCACG
TGGGATGCTGACAAGCCGCTTGAATGGCGCCAGAAGTATGGATGGACCGCCTTCTGTGGG
CCCGTTGGTCCCACTGGTCAGGATGCATGTGGCAAATGTCTCTCGGTGACGAACACGGCG
ACAGGGGATCAGATCACGGCGAGGATCGTGGACCAGTGCGCCAATGGGGGGCTGGATTTA
GACTGGGACACCGTCTTCTCCAAGATCGACAGCGACGGTCAAGGCTACCAGAATGGCCAC
CTCATCGTCGACTACCAGTTCGTCGACTGCGGCGATAACTAGCAGCTAATTAACCACTCT
TATAAACTTCCCTACATATATATACACATTTCGGACAGAGGAGTAATTAATATATCTCTG
CCTGATGAATGAATAAAGTGGCTGGTGAATAATTGTGATGCTAGGCTGCTGTAGATCGAT
CCGTTTACACATGCTCGAAGTATCAATAAAATTGTGTGGAAATGTGATGGATTTCTGTGG
CTAAAAGCCT