Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0591800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22498563:22500355:1 gene:Os11g0591800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 4D description:Barwin domain containing protein. (Os11t0591800-01)
Sequence

ATGCTGATGGGCCGTAAGATTATGGGCCTCCTGTTGGGCTGTGTGGGCCTTGTTGCTGTG
ATGCATGTGGCGGCGGCCCAACAAGCATTCGGCGTGAGAGCCACCTACCACTTTTACAGG
CCAGCAGCCAACGGCTGGGATCTGACGGCCACGGGTGCCTTCTGCTCCACGTGGGATGCT
GGGAAGCCGTTCGATTGGCGCAGCAAGTATGAGTGGACGGCCTTCTGTGGGCCCGTTGGG
CCCACCGGCAGGGACTCCTGCGGCAAGTGTCTTCGGGTGACGAATAGGGTGACGGGAGCC
CAGACCACGGCGAGGATTGTGGACAAGTGCGCCAACGGAGGACTAGATCTGGACTGGGAC
ACTGTCTTCTCCAAGATCGACACTGACGGCCAGGGCTTCCAGCGCGGGCACCTCACCGTC
GACTATAGCTTCGTTAACTGCGGCGACAACAATTATCTCGCTGAGGTTGTCATTTAA

Peptide Sequence

PEP ID

Os11t0591800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22498563:22500355:1 gene:Os11g0591800 transcript:Os11t0591800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 4D description:Barwin domain containing protein. (Os11t0591800-01)
Sequence

MLMGRKIMGLLLGCVGLVAVMHVAAAQQAFGVRATYHFYRPAANGWDLTATGAFCSTWDA
GKPFDWRSKYEWTAFCGPVGPTGRDSCGKCLRVTNRVTGAQTTARIVDKCANGGLDLDWD
TVFSKIDTDGQGFQRGHLTVDYSFVNCGDNNYLAEVVI

Transcript Sequence

Transcript ID

Os11t0591800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22498563:22500355:1 gene:Os11g0591800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 4D description:Barwin domain containing protein. (Os11t0591800-01)
Sequence

GTGTGTTCGACTTCGTGCTGGCTGCTCAAGAAACCGAGAGAGCAAAGGCTAAGTATTGTG
GATCAAGCATGCTGATGGGCCGTAAGATTATGGGCCTCCTGTTGGGCTGTGTGGGCCTTG
TTGCTGTGATGCATGTGGCGGCGGCCCAACAAGCATTCGGCGTGAGAGCCACCTACCACT
TTTACAGGCCAGCAGCCAACGGCTGGGATCTGACGGCCACGGGTGCCTTCTGCTCCACGT
GGGATGCTGGGAAGCCGTTCGATTGGCGCAGCAAGTATGAGTGGACGGCCTTCTGTGGGC
CCGTTGGGCCCACCGGCAGGGACTCCTGCGGCAAGTGTCTTCGGGTGACGAATAGGGTGA
CGGGAGCCCAGACCACGGCGAGGATTGTGGACAAGTGCGCCAACGGAGGACTAGATCTGG
ACTGGGACACTGTCTTCTCCAAGATCGACACTGACGGCCAGGGCTTCCAGCGCGGGCACC
TCACCGTCGACTATAGCTTCGTTAACTGCGGCGACAACAATTATCTCGCTGAGGTTGTCA
TTTAATTTGATACATGCTACCACCACTAATAAATTGTTCCGTAAAAGTTCTCTCGTTAAT
AAATTACACCGTAAATAAGTTCGCCAAATGAGATGGTTGCATGTATGCATAGTGAAGAAC
AAAAAAAAAAACTCCATGAAATTACCTGTCTGGCTGTCCTGTCCTGCCCTTGTTGTTGTT
GGTTCTGAATAACAGAATAAGCGTGTTCCTTTTGTTT