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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0586200-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:22173768:22174764:-1 gene:Os11g0586200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 6 description:Similar to Calmodulin. (Os11t0586200-00)
Sequence

ATGGAGAGCCATCTCAACGAGCAGCAGATCTCCGATTTCCGAGACGCCTTCTCGCTGTTC
GACAAGAACAATGACGGTTGCATAAGTAGGGAGGAGCTGGCCACCGTGCTCACACGCCTG
GGCATGGCGCCAAGCCAGGAGGATCTGCAAGACATGATCGTGGCCGTCGATGAGGATGGC
AATGGCACGATCGAGTTCGACGAGTTCCTCGCAATAATGAAGAAGAAACTATATAATGAC
AAGGGTGATGATGAGGAAGAACTGAGGAAGGCTTTCAGGATTTTCGACAAGGATGATAAT
GGATTCATATCACGCAATGAGGTATGCATGGTGATGGCTAGTCTTGGAGAGGAGATGACA
GAAGATGAGATTGATGATATGATGAAGGCAGCTGATAGCAACAACGACGGGCAAGTTGAT
TACGAAGAGTTCAAGCGAGTCATGATGAGCACGTAA

Peptide Sequence

PEP ID

Os11t0586200-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:22173768:22174764:-1 gene:Os11g0586200 transcript:Os11t0586200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 6 description:Similar to Calmodulin. (Os11t0586200-00)
Sequence

MESHLNEQQISDFRDAFSLFDKNNDGCISREELATVLTRLGMAPSQEDLQDMIVAVDEDG
NGTIEFDEFLAIMKKKLYNDKGDDEEELRKAFRIFDKDDNGFISRNEVCMVMASLGEEMT
EDEIDDMMKAADSNNDGQVDYEEFKRVMMST

Transcript Sequence

Transcript ID

Os11t0586200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22173768:22174764:-1 gene:Os11g0586200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 6 description:Similar to Calmodulin. (Os11t0586200-00)
Sequence

GAAAGTTCATGGAGAGCCATCTCAACGAGCAGCAGATCTCCGATTTCCGAGACGCCTTCT
CGCTGTTCGACAAGAACAATGACGGTTGCATAAGTAGGGAGGAGCTGGCCACCGTGCTCA
CACGCCTGGGCATGGCGCCAAGCCAGGAGGATCTGCAAGACATGATCGTGGCCGTCGATG
AGGATGGCAATGGCACGATCGAGTTCGACGAGTTCCTCGCAATAATGAAGAAGAAACTAT
ATAATGACAAGGGTGATGATGAGGAAGAACTGAGGAAGGCTTTCAGGATTTTCGACAAGG
ATGATAATGGATTCATATCACGCAATGAGGTATGCATGGTGATGGCTAGTCTTGGAGAGG
AGATGACAGAAGATGAGATTGATGATATGATGAAGGCAGCTGATAGCAACAACGACGGGC
AAGTTGATTACGAAGAGTTCAAGCGAGTCATGATGAGCACGTAA