Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0585700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22139918:22143513:1 gene:Os11g0585700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L4. (Os11t0585700-01)
Sequence

ATGCGGGCCCTCCTGCGCGCCGCGTCGGTGCTCCGCCGCGCGGCGGCTCCGGCCCTCGGC
GGCGGCCGCGCCGCGCCGCTTCCCCCCAAGAACTTGCCTGCTGTCTGTTTGAATGGGTAT
TCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAG
ACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACA
AACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCA
ATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGA
ACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCACAGGAAGAAAACCTTACAATCAA
AAAGGAACTGGCAGAGCACGACATGGTACACTGCGCGGCCCTCAGTTTCGCGGTGGTGCA
ACCATGCATGGGCCTAAACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGT
CTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGAT
GACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGAA
GGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCT
ACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATACAGCATC
CTTCAACATGACACTCTTGTAATGACGCGGAATGCTATCAATAGAATTGTTGAGCGTATG
CACACCCCCATCAGCCGCTAG

Peptide Sequence

PEP ID

Os11t0585700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22139918:22143513:1 gene:Os11g0585700 transcript:Os11t0585700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L4. (Os11t0585700-01)
Sequence

MRALLRAASVLRRAAAPALGGGRAAPLPPKNLPAVCLNGYSTLLAPANEVLIPQELLSSK
TVWTPDRELGQYEDLVARVTNFHNEDKGFMVLDGDVFDVPIRKDIVHRVVRWQLAKRQQG
THSTKTISEVSGTGRKPYNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLQKKVRR
LGLKIALSARTAEGKLLVFDDLEVPSHKTKNIVQYIGQMEGTKKVLLVDGGDIDKKLKLA
TQNLHYVNVLPSIGLNVYSILQHDTLVMTRNAINRIVERMHTPISR

Transcript Sequence

Transcript ID

Os11t0585700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22139918:22143513:1 gene:Os11g0585700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L4. (Os11t0585700-01)
Sequence

GAGAAAAACATATTCAGCACATCGCCGGCTCGCCTCTCCGCCGCCGCCGCCGCCGCCGTC
GCCGCCGCCTGCCTCTCCTCGCCGCCGTCCGATGCGGGCCCTCCTGCGCGCCGCGTCGGT
GCTCCGCCGCGCGGCGGCTCCGGCCCTCGGCGGCGGCCGCGCCGCGCCGCTTCCCCCCAA
GAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGT
GCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGG
GCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCAT
GGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGT
AAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGT
GAGCGGCACAGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTAC
ACTGCGCGGCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCA
TGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCG
AACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAA
AAACATTGTGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGG
AGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCT
TCCATCCATTGGCCTAAATGTATACAGCATCCTTCAACATGACACTCTTGTAATGACGCG
GAATGCTATCAATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGA
GATTCGACGTGAACACCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATG
CATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCT
TTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAGTGAACCATGTTGCGTCAGATC
CAATACATCAAAGTAGGAAGTGAATTGGTCATCATGGTGTGCGCTCATGACTCCAGATTT
CTAATAAAGACAGTTCTG