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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0582500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:22016848:22018431:1 gene:Os11g0582500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ANTHER SPECIFIC PROTEIN 6 description:Protease inhibitor, lipid transfer protein (LTP), Postmeiotic anther development (Os11t0582500-01)
Sequence

ATGGCGCCGTCCAAGTCCACAGCCGCCGCCGGCGTCCTCCTCGTCCTGCTCGTCGCGGCG
GCGGGCGGCGGCGCAGAGGCGGCGGCGACGACGTGCGTGGCGTCGCTGCTGGAGCTGAGC
CCGTGCCTGCCGTTCTTCAAGGACAAGGCGGCGACGGCGGCGCCGGAGGGGTGCTGCGCG
GGGCTGTCGTCCATCGTGAAGGGGGAGGCGGTGTGCCTGTGCCACATCGTGAACCACACC
CTGGAGCGCGCCATCGGCGTCGACATCCCCGTCGACCGCGCCTTCGCCCTCCTCCGCGAC
GTCTGCCGCCTCTCGCCGCCGGCGGACATCATCTCCACCTGCGCCAACGAGAAAGGTGGT
GTGCCGCCTCTCTACTCTTGCCCGGCTCCATCTGCCTGA

Peptide Sequence

PEP ID

Os11t0582500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:22016848:22018431:1 gene:Os11g0582500 transcript:Os11t0582500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ANTHER SPECIFIC PROTEIN 6 description:Protease inhibitor, lipid transfer protein (LTP), Postmeiotic anther development (Os11t0582500-01)
Sequence

MAPSKSTAAAGVLLVLLVAAAGGGAEAAATTCVASLLELSPCLPFFKDKAATAAPEGCCA
GLSSIVKGEAVCLCHIVNHTLERAIGVDIPVDRAFALLRDVCRLSPPADIISTCANEKGG
VPPLYSCPAPSA

Transcript Sequence

Transcript ID

Os11t0582500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:22016848:22018431:1 gene:Os11g0582500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ANTHER SPECIFIC PROTEIN 6 description:Protease inhibitor, lipid transfer protein (LTP), Postmeiotic anther development (Os11t0582500-01)
Sequence

ACACACACTCCCATCACTCCAATTAACCAAAGCTAATTAAGCTAGCTCAAGCTCTAATCC
ACATTTAGCTAGAATGGCGCCGTCCAAGTCCACAGCCGCCGCCGGCGTCCTCCTCGTCCT
GCTCGTCGCGGCGGCGGGCGGCGGCGCAGAGGCGGCGGCGACGACGTGCGTGGCGTCGCT
GCTGGAGCTGAGCCCGTGCCTGCCGTTCTTCAAGGACAAGGCGGCGACGGCGGCGCCGGA
GGGGTGCTGCGCGGGGCTGTCGTCCATCGTGAAGGGGGAGGCGGTGTGCCTGTGCCACAT
CGTGAACCACACCCTGGAGCGCGCCATCGGCGTCGACATCCCCGTCGACCGCGCCTTCGC
CCTCCTCCGCGACGTCTGCCGCCTCTCGCCGCCGGCGGACATCATCTCCACCTGCGCCAA
CGAGAAAGGTGGTGTGCCGCCTCTCTACTCTTGCCCGGCTCCATCTGCCTGAGTATATAT
GAGAAAAGAATAAATGTTACCAAAGGAGGGATTTCAACATATCTAAAAGTCAAGATGGAG
TAACTTTGGTATACAAGACCAACATATATATCACGTTGTTAAAGGACAAGTAGATATTGG
ATTATTGGCATATACTGATATATCCATGCTAATATTAGTATATGTATATTCTGCAACATG
CATGGACATACACATTGTCAAATGAAGTACTAAGTAACACGGAACGTGTACTAGCTCGTG
CTACTGTCGTGCTATGCGCTGTCAATAGAAATAAAATATTTTACATTGTGGTATTAAGCA
TTAAAGCCATATTGTATTCTAATATTATCGGGCGGAGATTGCGGATTATTCCT