Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0582300-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:22003368:22010271:1 gene:Os11g0582300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to root hair defective 3 GTP-binding (RHD3) family protein. (Os11t0582300-01);Similar to GTP-binding protein-like; root hair defective 3 protein-like. (Os11t0582300-02)
Sequence	ATGGAGGTCCCCATCTCCGGCGGCGGCGGAGGGGAGAGGTTCTGCCACGCGGCGCAGGTG GTGGGGGCGGACGGGGAGATGGACGGGGAGGCGATGGCGCGGTTCGCGGCGGGGGCGGGG CTCCTGGGCCGTGGCCTCTCCTACGCCGTCGTCTCCATCGTCGGGCCCCAGGGCAGCGGG AAAAGCACCCTGCTCAACCAACTCTTCGGGACAAGCTTCACGGAGATGGATGCCTTGAAA GGGAGGAGCCAGACTACCAAGGGAATTTGGATTGCCAAGGCTGTAGGCATTGAGCCGTTT ACTGTTGTAATGGATTTGGAGGGCACGGACGGCAGGGAAAGAGGAGAGGATGATACAGCC TTCGAGAAGCAGAGTGCCCTTTTTGCTCTGGCAGTATCAGATATTGTTATGATAAATTTG TGGTGTCATGATATAGGACGAGAACATGCAGCTAATAGGCCTCTGTTGAAAACAATATTT GAGGTATTGATGCGTTTATTCAGCCCACGCAAAACAACGTTGCTACTTGTTATTCGCGAT AAAACCAAGACTCCACTAGAGTATCTAACCCAAGCTCTGAAGGAGGATATCCAGAAGATA TGGAATGCTGTTCGCAAACCAGAAGTTTACAAGGAAGCTGCACTAAGTGAATTCTTCAAT GTGGAGGTTACTGCTCTGTCAAGTTACGAAGAGAAAGAAAATCTATTTAAGGAGCAGGTT GGGCAACTCAGGCAGAGATTTATTCATTCAATCGCTCCAGGTGGTCTAGCAGCTGATAGA AGAGGTGTGATTCCTGCTTCAGGTTTTTGTCTTAGTGCACTCCAGATCTGGAAAGTAATA CGGGAAAACAAGGATCTCAACCTTCCCGCTCACAAGATCATGGTTGCTACTGTTCGGTGT GAAGAGATTGCGGATGAAAAGCTCAGAAGTTTCATATCTGATAAGGGCTGGTTGGAGCTA GAAACAGCTGCAAATTCTGGTCTAGTACCAGGCTTTGGAAAGAAGCTTAATGCTATTCTT GATTTTTATCTATCTGAGTATGACACAGAAGCCATGTACTTTGATGAGGATGTGAGAACC GCTAAACGCCAACAGTTAGAATCTGAAATCCTAAAACACACATATGATGCTTTCAAGAAA ATGTTAGAACACCTGCATCATGTGGTTCTGAACAAATTCAAAAGTGATCTAGAACAATCA TTAAGGAGCGGTGAGGGATTTGCAGCATCAGCTCGTTATTGTGTGCAGTCATCAATGGCG GAATTTGATGCTGGATTGAGAGATGCTTTGGTTAAGCATGCAGAGTGGGACACGACAAAA GTTAGGAGCAAACTGGAGCAGCATATAGAAGCTCATGCAACATCTGTTCGGGGTACAAAA CTGGCTGAACTAAAGGCTAATTATGAGAAAAAACTCTTGGATACACTTGCTGGACCTGTA CAGTCAATCTTGGAAACTGGTGAAAAGGACTCTTGGGCATGTATTAGAAGACTTTACAGG CATGCGACTGAAAGTGCTATTTTGGCATTCTCAGCTTCCCTCTCCGAGTTTGAACTAGAC CAGACAACTATCCGTAAGATGGTCATGGAATTAAGAGAACATGCAAGAAGTATAGTAGAA GAGAAAGCTAGAGAAGAAGCTGGGAACGTTCTGATGCGTATGAAAGAAAGGTTTTCCACT GTGTTGAGCCGTGATAAGGATTCCATGCCTAGGACATGGAAAGGAAATGAAGATATACGT GCAATCACTAGAGAAGCACGCTTAGCGGCTTTAAGACTTATGTCGGTAATGGCAGCTGTA CGTTTGGACGATAAACCAGATAAAATAGATCGGGCTCTAACGACTGCTCTTTTAGATGGA GGACCGCTTTCACAGAAAAGGAGTATTGAATTCACATCTGATCCTCTTGCTTCAAGCACA TGGGAGGAGGTGTCAGAAAAGAATACGCTGATCACACCAGTGCAGTGTAAATCCATCTGG AGGCAATTCAATGCAGAGACAGAGTATGCTGTTGCACAAGCAATTTCTATGCAGGAAGCA CACAGACGTAGCAATAATTGGCTGCCACCTGCATGGACTGTTTTGCTTCTCGCAATTTTA GGTTACAACGAATTTATATTCCTTCTAAGGAACCCTTTATATCTGCTGGGGCTCTTCGTC GCCTTCGTAGTATCCTATGCTGCATGGTTGCAATATGACATCACAGCCTATTTTCGCCAT GGCACGCTCTCAGGTCTTCTGACTATTACATCTGGGTTTCTCCCCACAATAATGGACATC ATAACAGCAGTCATCAACATGAGTCACAACCAGAAGAGCTCCTCGCACCCGCCTCGACAT CGTCCCCCGCTTCATCCTCAAAGCTTCAGGAACCAGGCGCAGCAACAGTCTCAGGCTCAG GTGCAGTATCAGGCTCCAAGTTCACTGTCATCATCCTCTTCGGTGGGCTCCAACAGCGAT GACGAATCCTGA

Peptide Sequence

PEP ID	Os11t0582300-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:22003368:22010271:1 gene:Os11g0582300 transcript:Os11t0582300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to root hair defective 3 GTP-binding (RHD3) family protein. (Os11t0582300-01);Similar to GTP-binding protein-like; root hair defective 3 protein-like. (Os11t0582300-02)
Sequence	MEVPISGGGGGERFCHAAQVVGADGEMDGEAMARFAAGAGLLGRGLSYAVVSIVGPQGSG KSTLLNQLFGTSFTEMDALKGRSQTTKGIWIAKAVGIEPFTVVMDLEGTDGRERGEDDTA FEKQSALFALAVSDIVMINLWCHDIGREHAANRPLLKTIFEVLMRLFSPRKTTLLLVIRD KTKTPLEYLTQALKEDIQKIWNAVRKPEVYKEAALSEFFNVEVTALSSYEEKENLFKEQV GQLRQRFIHSIAPGGLAADRRGVIPASGFCLSALQIWKVIRENKDLNLPAHKIMVATVRC EEIADEKLRSFISDKGWLELETAANSGLVPGFGKKLNAILDFYLSEYDTEAMYFDEDVRT AKRQQLESEILKHTYDAFKKMLEHLHHVVLNKFKSDLEQSLRSGEGFAASARYCVQSSMA EFDAGLRDALVKHAEWDTTKVRSKLEQHIEAHATSVRGTKLAELKANYEKKLLDTLAGPV QSILETGEKDSWACIRRLYRHATESAILAFSASLSEFELDQTTIRKMVMELREHARSIVE EKAREEAGNVLMRMKERFSTVLSRDKDSMPRTWKGNEDIRAITREARLAALRLMSVMAAV RLDDKPDKIDRALTTALLDGGPLSQKRSIEFTSDPLASSTWEEVSEKNTLITPVQCKSIW RQFNAETEYAVAQAISMQEAHRRSNNWLPPAWTVLLLAILGYNEFIFLLRNPLYLLGLFV AFVVSYAAWLQYDITAYFRHGTLSGLLTITSGFLPTIMDIITAVINMSHNQKSSSHPPRH RPPLHPQSFRNQAQQQSQAQVQYQAPSSLSSSSSVGSNSDDES

Transcript Sequence

Transcript ID	Os11t0582300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:22003368:22010271:1 gene:Os11g0582300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to root hair defective 3 GTP-binding (RHD3) family protein. (Os11t0582300-01);Similar to GTP-binding protein-like; root hair defective 3 protein-like. (Os11t0582300-02)
Sequence	ACGTATCGCTCTCCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGCCGCGC GGCGGAGGCGTTCGTCGCGAGCTGTCGGCTTCCCTCCTCGCGCCCGCGGCGGCTGTGGCC ATGGAGGTCCCCATCTCCGGCGGCGGCGGAGGGGAGAGGTTCTGCCACGCGGCGCAGGTG GTGGGGGCGGACGGGGAGATGGACGGGGAGGCGATGGCGCGGTTCGCGGCGGGGGCGGGG CTCCTGGGCCGTGGCCTCTCCTACGCCGTCGTCTCCATCGTCGGGCCCCAGGGCAGCGGG AAAAGCACCCTGCTCAACCAACTCTTCGGGACAAGCTTCACGGAGATGGATGCCTTGAAA GGGAGGAGCCAGACTACCAAGGGAATTTGGATTGCCAAGGCTGTAGGCATTGAGCCGTTT ACTGTTGTAATGGATTTGGAGGGCACGGACGGCAGGGAAAGAGGAGAGGATGATACAGCC TTCGAGAAGCAGAGTGCCCTTTTTGCTCTGGCAGTATCAGATATTGTTATGATAAATTTG TGGTGTCATGATATAGGACGAGAACATGCAGCTAATAGGCCTCTGTTGAAAACAATATTT GAGGTATTGATGCGTTTATTCAGCCCACGCAAAACAACGTTGCTACTTGTTATTCGCGAT AAAACCAAGACTCCACTAGAGTATCTAACCCAAGCTCTGAAGGAGGATATCCAGAAGATA TGGAATGCTGTTCGCAAACCAGAAGTTTACAAGGAAGCTGCACTAAGTGAATTCTTCAAT GTGGAGGTTACTGCTCTGTCAAGTTACGAAGAGAAAGAAAATCTATTTAAGGAGCAGGTT GGGCAACTCAGGCAGAGATTTATTCATTCAATCGCTCCAGGTGGTCTAGCAGCTGATAGA AGAGGTGTGATTCCTGCTTCAGGTTTTTGTCTTAGTGCACTCCAGATCTGGAAAGTAATA CGGGAAAACAAGGATCTCAACCTTCCCGCTCACAAGATCATGGTTGCTACTGTTCGGTGT GAAGAGATTGCGGATGAAAAGCTCAGAAGTTTCATATCTGATAAGGGCTGGTTGGAGCTA GAAACAGCTGCAAATTCTGGTCTAGTACCAGGCTTTGGAAAGAAGCTTAATGCTATTCTT GATTTTTATCTATCTGAGTATGACACAGAAGCCATGTACTTTGATGAGGATGTGAGAACC GCTAAACGCCAACAGTTAGAATCTGAAATCCTAAAACACACATATGATGCTTTCAAGAAA ATGTTAGAACACCTGCATCATGTGGTTCTGAACAAATTCAAAAGTGATCTAGAACAATCA TTAAGGAGCGGTGAGGGATTTGCAGCATCAGCTCGTTATTGTGTGCAGTCATCAATGGCG GAATTTGATGCTGGATTGAGAGATGCTTTGGTTAAGCATGCAGAGTGGGACACGACAAAA GTTAGGAGCAAACTGGAGCAGCATATAGAAGCTCATGCAACATCTGTTCGGGGTACAAAA CTGGCTGAACTAAAGGCTAATTATGAGAAAAAACTCTTGGATACACTTGCTGGACCTGTA CAGTCAATCTTGGAAACTGGTGAAAAGGACTCTTGGGCATGTATTAGAAGACTTTACAGG CATGCGACTGAAAGTGCTATTTTGGCATTCTCAGCTTCCCTCTCCGAGTTTGAACTAGAC CAGACAACTATCCGTAAGATGGTCATGGAATTAAGAGAACATGCAAGAAGTATAGTAGAA GAGAAAGCTAGAGAAGAAGCTGGGAACGTTCTGATGCGTATGAAAGAAAGGTTTTCCACT GTGTTGAGCCGTGATAAGGATTCCATGCCTAGGACATGGAAAGGAAATGAAGATATACGT GCAATCACTAGAGAAGCACGCTTAGCGGCTTTAAGACTTATGTCGGTAATGGCAGCTGTA CGTTTGGACGATAAACCAGATAAAATAGATCGGGCTCTAACGACTGCTCTTTTAGATGGA GGACCGCTTTCACAGAAAAGGAGTATTGAATTCACATCTGATCCTCTTGCTTCAAGCACA TGGGAGGAGGTGTCAGAAAAGAATACGCTGATCACACCAGTGCAGTGTAAATCCATCTGG AGGCAATTCAATGCAGAGACAGAGTATGCTGTTGCACAAGCAATTTCTATGCAGGAAGCA CACAGACGTAGCAATAATTGGCTGCCACCTGCATGGACTGTTTTGCTTCTCGCAATTTTA GGTTACAACGAATTTATATTCCTTCTAAGGAACCCTTTATATCTGCTGGGGCTCTTCGTC GCCTTCGTAGTATCCTATGCTGCATGGTTGCAATATGACATCACAGCCTATTTTCGCCAT GGCACGCTCTCAGGTCTTCTGACTATTACATCTGGGTTTCTCCCCACAATAATGGACATC ATAACAGCAGTCATCAACATGAGTCACAACCAGAAGAGCTCCTCGCACCCGCCTCGACAT CGTCCCCCGCTTCATCCTCAAAGCTTCAGGAACCAGGCGCAGCAACAGTCTCAGGCTCAG GTGCAGTATCAGGCTCCAAGTTCACTGTCATCATCCTCTTCGGTGGGCTCCAACAGCGAT GACGAATCCTGAAGCCTCATAAAACATCCCTGTAGAAGACACGTTCCAGTCTCCAGGAAG GACTTTGT