Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0581900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:21982349:21986403:1 gene:Os11g0581900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os11t0581900-01)
Sequence

ATGTCGAAGGCCGAGGCCGCCGCCGCCGGCGACGCCGCCAAGCCCGACCCGGAGATGGGA
GTCGCGGGGGAGAAGGAGGTGGTTGCGGAGAAGGCACCGGCGAGGAGGAAGGTAGCGGCG
GAGGAGGAGGACCCGCGGCTGCGGTGGGCGTTCGTGCGGAAGGTGTACTGTATCCTGGCG
CTGCAGTTCGCCGTCACGGCGGCGATCGCCGTCGTGGCGTGGGCCGTCCGCCCCATCCCG
CGCTTCTTCGCGGCGGGCTCCCTCGCCTCGTGGCTCGTCTACCTCGCCATCCTCCTCTGC
CCCTTCATCGTGCTGTGGCCGATGCTCAAGTACAGGGAGAAGCACCCCGTGAACCTGCTG
CTGCTGGGCCTCTTCACGCTCTGCGAGAGCCTCACCATCGCCGTCTGCTCCTCGACCTTC
CTCGGTAAAGTGGTTCTGCAAGCAGCAATCCTAACGGCGGTTGCTGTCATCGGCCTCACC
ATTTTCACATTCTGGGCAGCCCACAGGGGCCATGATTTCACCTTCATGTATCCCTTCCTG
GCCGCCAGCCTTCTGGTGCTTCTGGCATACCTCATCATTCAGATCTGTTTCCCTCTGGGG
AGGGCTGGCATGACGATCTACGGCTGCCTCGCCACCGTGCTGTTCTCCGCCTTCATCGTC
TTCGACACCAATCAGCTGATCAAGCGCCACACCTACAACGAGTACGTCATCGCCGCCATC
TCGCTGTACCTCGACGTCATCAACCTCTTCATGGCTCAGCTCTCGTTCTCCATCTAA

Peptide Sequence

PEP ID

Os11t0581900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:21982349:21986403:1 gene:Os11g0581900 transcript:Os11t0581900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os11t0581900-01)
Sequence

MSKAEAAAAGDAAKPDPEMGVAGEKEVVAEKAPARRKVAAEEEDPRLRWAFVRKVYCILA
LQFAVTAAIAVVAWAVRPIPRFFAAGSLASWLVYLAILLCPFIVLWPMLKYREKHPVNLL
LLGLFTLCESLTIAVCSSTFLGKVVLQAAILTAVAVIGLTIFTFWAAHRGHDFTFMYPFL
AASLLVLLAYLIIQICFPLGRAGMTIYGCLATVLFSAFIVFDTNQLIKRHTYNEYVIAAI
SLYLDVINLFMAQLSFSI

Transcript Sequence

Transcript ID

Os11t0581900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:21982349:21986403:1 gene:Os11g0581900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os11t0581900-01)
Sequence

AGTTGCTTTTGCTTCGTCTACCTCTCGCCGCCGTTTTCCCCCCAAAACCCGCGACGACGA
AAACCCTAGCCGTCGCCGGAATGTCGAAGGCCGAGGCCGCCGCCGCCGGCGACGCCGCCA
AGCCCGACCCGGAGATGGGAGTCGCGGGGGAGAAGGAGGTGGTTGCGGAGAAGGCACCGG
CGAGGAGGAAGGTAGCGGCGGAGGAGGAGGACCCGCGGCTGCGGTGGGCGTTCGTGCGGA
AGGTGTACTGTATCCTGGCGCTGCAGTTCGCCGTCACGGCGGCGATCGCCGTCGTGGCGT
GGGCCGTCCGCCCCATCCCGCGCTTCTTCGCGGCGGGCTCCCTCGCCTCGTGGCTCGTCT
ACCTCGCCATCCTCCTCTGCCCCTTCATCGTGCTGTGGCCGATGCTCAAGTACAGGGAGA
AGCACCCCGTGAACCTGCTGCTGCTGGGCCTCTTCACGCTCTGCGAGAGCCTCACCATCG
CCGTCTGCTCCTCGACCTTCCTCGGTAAAGTGGTTCTGCAAGCAGCAATCCTAACGGCGG
TTGCTGTCATCGGCCTCACCATTTTCACATTCTGGGCAGCCCACAGGGGCCATGATTTCA
CCTTCATGTATCCCTTCCTGGCCGCCAGCCTTCTGGTGCTTCTGGCATACCTCATCATTC
AGATCTGTTTCCCTCTGGGGAGGGCTGGCATGACGATCTACGGCTGCCTCGCCACCGTGC
TGTTCTCCGCCTTCATCGTCTTCGACACCAATCAGCTGATCAAGCGCCACACCTACAACG
AGTACGTCATCGCCGCCATCTCGCTGTACCTCGACGTCATCAACCTCTTCATGGCTCAGC
TCTCGTTCTCCATCTAAGTGGCACGCCTGTTCTTACGCCCTTCAACGGTTGTCCAGTACA
TGGTGGTTCTTACAGCTGAAGAAACTTAGTTACATTTACCTTACCTACCATATCCTACAC
TACTATATATGCAGCGAGAAGTCTTGCAGAGCTGGAGACTCTGGACCTGTAATTACTTAA
TCATCTCTAGCTATGTTGCACTGTCGTTGCGCTGATAGCACGATAGATATATTCTGGTAC
CTTTGAGACATGTTTGCAGTGATCTGCACTACATCGGTTTAGATCTAATCAGTGGAGCGA
AAAACTTCAATGGAGATGTTAATTTCTC