Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0578100-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:21806096:21809288:1 gene:Os11g0578100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C76 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os11t0578100-00)
Sequence	ATGATGGAGTGCAACCGCGAAGAGGCCTTTAGGGCCAGGGAAATTGCTTTAAGAAAGATG GAAAACAAAGACTTCAATGGTGCCCAAAAGATTGTTCTTAAAGCTCAAAAGCTTTTCCCA GAGCTTGAGAACATATCCCAGCTGTTAAATATCTGTCATGTACATTGTGCAGCAGAAGCA ACGGTAAATGGACAGACGGACTGGTATGGAATCCTTCAAGTGGAGGCGACAGCAGATGAG GCTACCATAAGAAAGCAATACCGCAAGCTTGCCTTTTCACTTCATCCTGACAAAAATAGT TTCGCTGGCGCTGAAGCTGCTTTCAAGTTGGTTGCTGAAGCTCATTCACTATTGTGTGAT CCAACAAAACGTCCTATTTATGACATCAAAAGGAATAATATTCCCAGAAAGGCTCCAAAG CAAGCTACACGGCCCACAAAGAAAACTCAGGCAAACAAATACAGTGTACCTGTATACTTA CATGCATTTTGGACAATGTGCCCACATTGTCAGATGCGATATCAGTACTACAACAATGCC ATAAATACTACTGTCTGTTGTATGAACTGCAGAAGGAATTTTTTTGCATACAACCTGCAA GAACAGCCTGTGCCTACACCAAATGTACCTTATAGTTCTCAATTTCCAGCAAACATGTTT CCAAATCAACGGCGTGATCCCATCAGTCGACAGGGCCACCCTGTGAAGCTTTCTTGCACA GGTGGAAACACAGATGTGAGGCCGGGGACATATAGCTGGCCAGGCAGTGATGAGAGAACT ATTCAGTCAGAGATGACAAGGGGGAAAGATCAATTTCCAGCAAGGAATCAAGATAAATAT TCTGTACCAACAGCAAATGGGAATTCAGGTGGATGTTCAATACCAGTTCCTGATTGTCCA GACACTATTGACAGGCAAAAGTTGGGTAGAGAAGATGCATCTGTTGCACCTGCTATGAAT GTGCCTGGTCATTCGAAGCTTCATTCGACAGGTGGAGGCACAAATGCCAAACCACGGGTA AATGTGGCACAATGGAAGGAAACCACAAAAGAGGATAGCAGTGCAAGTGTTGAAAAGAAA GCAAACCAGTCAATGATGAATCAAAGAAAATCTTCTGCCCAAACTGCAAATGAGAATGCC AGTGGAAGATTCAAGCCAGACCATGCTGATCCAAATGTTTTTGACAGAAAGAACTTTGGT ACAGAAGATTCATTTCCAGTGCCCAATTCTGCAGTACCCTCCAGTCTCCGGAGATCAGCT AGGAGAAAGCAAGATGCTGGTGACAACGGCAGCATGAACTCCAAGGTCAGAAAGAAGCAA AAGAAGAATAATGTGCTATCTGATGTTGACTTGAATTGCCAGCAAATATTCAACAATAAT GGCACTAGTGGTGACAAACAATCTGCTCCACCTCATGTGTCGAGCACAGTAGACATTCAA GATAAAACAAAAGTTACAGATGCAGATAGTAAGACCAAGGCAGAATCTACTGATACTGCT GGTTGGAATGTGCCTTCCTGCTTTGAAAAACTATCATTCCCTGATCCAGATTTCTATGAT TTTGAGAAGCTCAGGGATATCAATATGTTCGCAGTTGGTCAGATATGGGCCCTTTATGAT GACCTTGATGGCATGCCAAGATTTTATGCTCGAATTAAACATTTTGATGCATCCAACTTC AAAGCTCATCTCACTTGGTTGGAGTACAATGCAGCAAGTGAAGAAGAGAAGAAATGGACT GATGAAGAACTACCTGTTGCTTGTGGTAAGTTTTGCTTAGGGTCAACAGAGGTATCACAT GACAGACTCATGTTCTCTCACATTGTTTCATGGACAAAAGGCAAAAAGAGGAATGCCTAT GAAGTATATCCTAATAAGGGTGAGGTATGGGCGCTTTATAAGGATTGGAGCATGCAGTGG AATTCAGATGCAGACAGCCATCGGTCTTATGAGTATGAAGTTGTTGAAATCTTGTCAGAT TTCTCAGTTAATGATGGTATCACTGTTGTCCCATTAGTCAGGATTAAAGGCTTTGTGAGT TTATTTGCGGCGGCTAAAGACAAATCCACAAATGTGATAGTGTCGAGTGAGTTGCTTCGA TTTTCTCACAGTATCCCCTCTTATAGGACAAATGGAAATGAGAAAGTAGGTTCCCCAGCA GGGTTTATAGAACTTGACACTGCTTGTCTCCCCAATGACATGGATATAATATTTCCTTCT GTCCCCCTGGAATCTTACATCTCCCTTGGCAAGAAAGAGGACAGTACGATCATTGATTTG ACCAATGATAGTACAAGTAGTAGAATGGATCCTGGAAATGAGAAAAAGGAGAATCTGCCT GAAGCACATATTTGCCGCCCAGTGTCTACAGAAAATCATGAAAGTCTTTCTTATGAGAAA AACACATCCTTGCCCAAAAATGGCCATGATGCCAACGGTTTTGGCAATTCTTCTGAGCCA AGCTGTCCCTCCCCAAGTATTTATTCATATCCTGATTCAGAATTCCATAACTTCGAGGAA GGCCGCACATGTGAGAAGTTTGAACCTGGACAAATTTGGGCTTTATACAGTGATGCTGAT AAATTTCCCAAGTTCTATGGTTGGATAAGCAAAGTCGAGCTACAACCATTCAGAGTACAT TTGATCTGGCTTGAAGCTTGTCCTGAACAGGAGCAGGAGAAACAGTGGTTGGATCAGGAC ATACCAGTCTGCTGTGGCAAATTTAAAATTCGGACCTGGAAAGCCCAATATGAGACAACT GATACTTTCTCTCATTTAGTGCACACGGGACAGAGGGACTCAACATGGCAGATTGACATT CTTCCACAAGTAGGCGAAATTTGGTGTATCTACATGAACTGGACATCTGACTGGACTCCT TCCAGCATAGATATGTGCGAGTTCGCCATCGGCGAGATCATTGAGTGCACGGAAGCACTT ATAAAAGTTTCTCTGCTGACCCAAGTTAATGGCTACAGAGCGGTGTTTAAGCCTGACAGG CAAAGTGGAGTTCTGGAGATACCTAAAAGAGATCGTTTGAAGTTTTCTCATCAAATACCA TCCTTCCGTCTGACAGAAGAAAGAGGTGGCAAGCTCCGTGGCTTCTATGAGCTTGATCCA GCCTCTGTTCCTGACGTTTTCCTCTACAGGGACACCCCATGA

Peptide Sequence

PEP ID	Os11t0578100-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:21806096:21809288:1 gene:Os11g0578100 transcript:Os11t0578100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C76 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os11t0578100-00)
Sequence	MMECNREEAFRAREIALRKMENKDFNGAQKIVLKAQKLFPELENISQLLNICHVHCAAEA TVNGQTDWYGILQVEATADEATIRKQYRKLAFSLHPDKNSFAGAEAAFKLVAEAHSLLCD PTKRPIYDIKRNNIPRKAPKQATRPTKKTQANKYSVPVYLHAFWTMCPHCQMRYQYYNNA INTTVCCMNCRRNFFAYNLQEQPVPTPNVPYSSQFPANMFPNQRRDPISRQGHPVKLSCT GGNTDVRPGTYSWPGSDERTIQSEMTRGKDQFPARNQDKYSVPTANGNSGGCSIPVPDCP DTIDRQKLGREDASVAPAMNVPGHSKLHSTGGGTNAKPRVNVAQWKETTKEDSSASVEKK ANQSMMNQRKSSAQTANENASGRFKPDHADPNVFDRKNFGTEDSFPVPNSAVPSSLRRSA RRKQDAGDNGSMNSKVRKKQKKNNVLSDVDLNCQQIFNNNGTSGDKQSAPPHVSSTVDIQ DKTKVTDADSKTKAESTDTAGWNVPSCFEKLSFPDPDFYDFEKLRDINMFAVGQIWALYD DLDGMPRFYARIKHFDASNFKAHLTWLEYNAASEEEKKWTDEELPVACGKFCLGSTEVSH DRLMFSHIVSWTKGKKRNAYEVYPNKGEVWALYKDWSMQWNSDADSHRSYEYEVVEILSD FSVNDGITVVPLVRIKGFVSLFAAAKDKSTNVIVSSELLRFSHSIPSYRTNGNEKVGSPA GFIELDTACLPNDMDIIFPSVPLESYISLGKKEDSTIIDLTNDSTSSRMDPGNEKKENLP EAHICRPVSTENHESLSYEKNTSLPKNGHDANGFGNSSEPSCPSPSIYSYPDSEFHNFEE GRTCEKFEPGQIWALYSDADKFPKFYGWISKVELQPFRVHLIWLEACPEQEQEKQWLDQD IPVCCGKFKIRTWKAQYETTDTFSHLVHTGQRDSTWQIDILPQVGEIWCIYMNWTSDWTP SSIDMCEFAIGEIIECTEALIKVSLLTQVNGYRAVFKPDRQSGVLEIPKRDRLKFSHQIP SFRLTEERGGKLRGFYELDPASVPDVFLYRDTP

Transcript Sequence

Transcript ID	Os11t0578100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:21806096:21809288:1 gene:Os11g0578100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C76 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os11t0578100-00)
Sequence	ATGATGGAGTGCAACCGCGAAGAGGCCTTTAGGGCCAGGGAAATTGCTTTAAGAAAGATG GAAAACAAAGACTTCAATGGTGCCCAAAAGATTGTTCTTAAAGCTCAAAAGCTTTTCCCA GAGCTTGAGAACATATCCCAGCTGTTAAATATCTGTCATGTACATTGTGCAGCAGAAGCA ACGGTAAATGGACAGACGGACTGGTATGGAATCCTTCAAGTGGAGGCGACAGCAGATGAG GCTACCATAAGAAAGCAATACCGCAAGCTTGCCTTTTCACTTCATCCTGACAAAAATAGT TTCGCTGGCGCTGAAGCTGCTTTCAAGTTGGTTGCTGAAGCTCATTCACTATTGTGTGAT CCAACAAAACGTCCTATTTATGACATCAAAAGGAATAATATTCCCAGAAAGGCTCCAAAG CAAGCTACACGGCCCACAAAGAAAACTCAGGCAAACAAATACAGTGTACCTGTATACTTA CATGCATTTTGGACAATGTGCCCACATTGTCAGATGCGATATCAGTACTACAACAATGCC ATAAATACTACTGTCTGTTGTATGAACTGCAGAAGGAATTTTTTTGCATACAACCTGCAA GAACAGCCTGTGCCTACACCAAATGTACCTTATAGTTCTCAATTTCCAGCAAACATGTTT CCAAATCAACGGCGTGATCCCATCAGTCGACAGGGCCACCCTGTGAAGCTTTCTTGCACA GGTGGAAACACAGATGTGAGGCCGGGGACATATAGCTGGCCAGGCAGTGATGAGAGAACT ATTCAGTCAGAGATGACAAGGGGGAAAGATCAATTTCCAGCAAGGAATCAAGATAAATAT TCTGTACCAACAGCAAATGGGAATTCAGGTGGATGTTCAATACCAGTTCCTGATTGTCCA GACACTATTGACAGGCAAAAGTTGGGTAGAGAAGATGCATCTGTTGCACCTGCTATGAAT GTGCCTGGTCATTCGAAGCTTCATTCGACAGGTGGAGGCACAAATGCCAAACCACGGGTA AATGTGGCACAATGGAAGGAAACCACAAAAGAGGATAGCAGTGCAAGTGTTGAAAAGAAA GCAAACCAGTCAATGATGAATCAAAGAAAATCTTCTGCCCAAACTGCAAATGAGAATGCC AGTGGAAGATTCAAGCCAGACCATGCTGATCCAAATGTTTTTGACAGAAAGAACTTTGGT ACAGAAGATTCATTTCCAGTGCCCAATTCTGCAGTACCCTCCAGTCTCCGGAGATCAGCT AGGAGAAAGCAAGATGCTGGTGACAACGGCAGCATGAACTCCAAGGTCAGAAAGAAGCAA AAGAAGAATAATGTGCTATCTGATGTTGACTTGAATTGCCAGCAAATATTCAACAATAAT GGCACTAGTGGTGACAAACAATCTGCTCCACCTCATGTGTCGAGCACAGTAGACATTCAA GATAAAACAAAAGTTACAGATGCAGATAGTAAGACCAAGGCAGAATCTACTGATACTGCT GGTTGGAATGTGCCTTCCTGCTTTGAAAAACTATCATTCCCTGATCCAGATTTCTATGAT TTTGAGAAGCTCAGGGATATCAATATGTTCGCAGTTGGTCAGATATGGGCCCTTTATGAT GACCTTGATGGCATGCCAAGATTTTATGCTCGAATTAAACATTTTGATGCATCCAACTTC AAAGCTCATCTCACTTGGTTGGAGTACAATGCAGCAAGTGAAGAAGAGAAGAAATGGACT GATGAAGAACTACCTGTTGCTTGTGGTAAGTTTTGCTTAGGGTCAACAGAGGTATCACAT GACAGACTCATGTTCTCTCACATTGTTTCATGGACAAAAGGCAAAAAGAGGAATGCCTAT GAAGTATATCCTAATAAGGGTGAGGTATGGGCGCTTTATAAGGATTGGAGCATGCAGTGG AATTCAGATGCAGACAGCCATCGGTCTTATGAGTATGAAGTTGTTGAAATCTTGTCAGAT TTCTCAGTTAATGATGGTATCACTGTTGTCCCATTAGTCAGGATTAAAGGCTTTGTGAGT TTATTTGCGGCGGCTAAAGACAAATCCACAAATGTGATAGTGTCGAGTGAGTTGCTTCGA TTTTCTCACAGTATCCCCTCTTATAGGACAAATGGAAATGAGAAAGTAGGTTCCCCAGCA GGGTTTATAGAACTTGACACTGCTTGTCTCCCCAATGACATGGATATAATATTTCCTTCT GTCCCCCTGGAATCTTACATCTCCCTTGGCAAGAAAGAGGACAGTACGATCATTGATTTG ACCAATGATAGTACAAGTAGTAGAATGGATCCTGGAAATGAGAAAAAGGAGAATCTGCCT GAAGCACATATTTGCCGCCCAGTGTCTACAGAAAATCATGAAAGTCTTTCTTATGAGAAA AACACATCCTTGCCCAAAAATGGCCATGATGCCAACGGTTTTGGCAATTCTTCTGAGCCA AGCTGTCCCTCCCCAAGTATTTATTCATATCCTGATTCAGAATTCCATAACTTCGAGGAA GGCCGCACATGTGAGAAGTTTGAACCTGGACAAATTTGGGCTTTATACAGTGATGCTGAT AAATTTCCCAAGTTCTATGGTTGGATAAGCAAAGTCGAGCTACAACCATTCAGAGTACAT TTGATCTGGCTTGAAGCTTGTCCTGAACAGGAGCAGGAGAAACAGTGGTTGGATCAGGAC ATACCAGTCTGCTGTGGCAAATTTAAAATTCGGACCTGGAAAGCCCAATATGAGACAACT GATACTTTCTCTCATTTAGTGCACACGGGACAGAGGGACTCAACATGGCAGATTGACATT CTTCCACAAGTAGGCGAAATTTGGTGTATCTACATGAACTGGACATCTGACTGGACTCCT TCCAGCATAGATATGTGCGAGTTCGCCATCGGCGAGATCATTGAGTGCACGGAAGCACTT ATAAAAGTTTCTCTGCTGACCCAAGTTAATGGCTACAGAGCGGTGTTTAAGCCTGACAGG CAAAGTGGAGTTCTGGAGATACCTAAAAGAGATCGTTTGAAGTTTTCTCATCAAATACCA TCCTTCCGTCTGACAGAAGAAAGAGGTGGCAAGCTCCGTGGCTTCTATGAGCTTGATCCA GCCTCTGTTCCTGACGTTTTCCTCTACAGGGACACCCCATGACTTGCCAACGTCAAAGCA GACTCTTGAAGTA