Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0575600-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:21675029:21684772:1 gene:Os11g0575600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 10 description:Similar to Lipoxygenase (Fragment). (Os11t0575600-01)
Sequence	ATGCAGCAGCCGCAGGCGAGCAGCATGACGGCGGCGGCGAGGAGGCGGCAGCTGCAGGGA TCGGTGCTCGCCGGGAAGATGGTGCTCGTGCGCAAGGCTCTCGACACCAACTTGAACTCC GGCGACGTCGTGTGCCAGCTCGTCAGCTCCACGGTCGGCGACCCCGACAATGGCAACAGG GGGATGTTGGGCCAGGAGGCATGCGTCCATATCAACTCGGAGCTACACCCAACTCCCTAC GAGGCCTCCACATTCAGCTTCGAGTTCATCTGGGACATGAAGAAACAGGGTGTCCCCGGA GCGGTCATCGTCAAGAACTATTGCGACGAGGAGTTCTTCGTCAACACCATCACCCTCGAC ATTGTACCGGGCTATGGAACCATCGTCTTCACCGCTGAGTCGTGGGTTTACCCCGACGAG ATATACGACCATCTCCCCCGTGTCTTCTTCAGTAACCAACCATACCTGCCAAACCAAATG CCGGCGCCGCTGGTGCCGTATAGGGAGGAAGAGCTCCGGAACCTGAGAGGCGACGACAAT CCGGGCCCGTACAAGGACCATGACCGTGTCTACCGCTACGACGTCTACAACGACCTCGGC GAGCCAGACAGTGGCAACCCGCGCCCCGTGCTGGGTGGCTCCGACGAGCACCCTTACCCT CGCCGCTGCCGCACCGGCCGGAGGCGGACCAACACCGACCCCGACTCCGAGAGCCGCAAC GTCGGCTTCCCCCTAACCAACCATTTCTACGTGCCCCGCGACGAGGTGTTCAACGACCGC AAGAAGGCCTACTTCGACACCAACAACCTCAAGCTCTATATCATGCAAAAGTACGCCACC TTTCTCTTGCACGCCGACCAGCAGACCCCCTTCGAGTTCGACAGCTTCGCCGACGTGCTA AGCCTCTACGACGAGGGCTCCATCAACCTGCCCGGATGGCTCAACACTTTCCTCCAACCA TTGCTCGGCATAATCCCCTTCAAGTTGCTCCAGCAAGTCCTCACCCCCGATAGCGAGTTC ATCCTCAAGTTCCCCATGCCGGCGGTCATCAGGGAGGACAAGACGGCATGGCAAACAGAC GAAGAGTTTGCGCGCGAGATGCTCGCCGGCACCAACCCGGTCGTCATCCGCCGGCTCGGG GAAACCGAGTTCCCGCCCAAGAGCAAGCTAGACACAAGCAAGTATCACAACCAGAACAGC AGGATCACAGCGGCACACGTCGAGAAGTGCCTCGAGGTCGAGGGCCTCACCGTCGAGCAG GTGCTAGCCGACGGCCGCCTCTTCATCCTCGACCACCACGACCACTTCATGCCGTACCTG CTCGATGCCAACCATCAACCCGACACTTTCGTCTACGCGACGAGGACACTGCTCTTCCAC CGCAACGATGGCACTCTCCAGCCTGCAGCAATCGAGCTCAGCCTACCTCGCTTTGAGGCC GGCAGCACACTCATCTCGTCCGTCGGCGAGGTCTACACGCCGGCGTCAGACGGCGTGGAG GGCCACATCTGGCAGCTTGCCAAGGCCTACGTCACCGTCAATGACTACTCGTGGCACCAG CTCGTCAGCCACTGGCTCAACACGCACGCGGTGATGGAGCCGTTCGCCATTGCCACGCAC CGGCAGCTCAGCGTGGCGCACCCTATCCACAAGCTCCTCCACCCGCACTATCGTGACAAC TTGTTTATCAACGCCCTCGGCCGCCAGAGTCTGATCAACGCCGGTGGTAGCTCCGAGAAC ACCGTCTTCCTCGGCAAGTATGGGCTCTCCATGACATCGGAGGTGTACAGGAACTGGAAC TTCACCGAGCAGGCGCTCCCGGAGGACTTCATCAAGAGGGGCGTCGCCAAGCGCCGCTCC AATGGCGAGCTGGAGCTGCTGATCAAGGACTACCCGTACGCCGTCGATGGGCTCGCCATC TGGTCGGCAATCGAGACTTGGGTCCGCGACTATTGTGCCATCTACTACGCGGACGATGCG GCGGTCCAGGGCGACGCCGAGCTGCAGTCGTGGTGGAAAGATGTGCGCGAGGAAGGACAC GGAGACCTCAAGGACCACAAATGGTGGCCGGAGATGAAGACGGTGGCCGAGCTTGTCCAG TCATGCGCCACCATCATCTGGATCGCCTCGGCGCTGCACGCGGCCGTCAACTTCGGCCAG TACATGTACGCCGGCTACGTCCCGAACCGGCCGTCGGTGAGTCGGCGGCCGATGCCGAAG CCGGGCACCGACTTGTACAGGGAGCTGGAGCTCCACCCGGAGAAGGAATTCCTTCTCACC ATCACTAAGCAGGACCTGTCCATAGCTGGCATTGCCCTCGTCGAGCTCCTATCTAGCCAT TCCGATGACGAGGTCTACCTCGGGCAGCGCGACTCGCCGAACTGGACGTCCGACCTGGAT GCCATGAACGCGTTCGACCGCTTCCGTGAACGGCTCTTGGAGGTGGAGAAGAACATCGTG GCCAAGAACGACAAGGGCAGTGGATTCAAGAACAGGACAGGGCCGGTCAACATCCCCTAC AATTTGCTCTTCCCTTATGCCTCCGGCGACGCGGAGGCCAACACCGGGGTCACCGGCAAG GGCATCCCCAACAGCGCTTCCATCTGA

Peptide Sequence

PEP ID	Os11t0575600-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:21675029:21684772:1 gene:Os11g0575600 transcript:Os11t0575600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 10 description:Similar to Lipoxygenase (Fragment). (Os11t0575600-01)
Sequence	MQQPQASSMTAAARRRQLQGSVLAGKMVLVRKALDTNLNSGDVVCQLVSSTVGDPDNGNR GMLGQEACVHINSELHPTPYEASTFSFEFIWDMKKQGVPGAVIVKNYCDEEFFVNTITLD IVPGYGTIVFTAESWVYPDEIYDHLPRVFFSNQPYLPNQMPAPLVPYREEELRNLRGDDN PGPYKDHDRVYRYDVYNDLGEPDSGNPRPVLGGSDEHPYPRRCRTGRRRTNTDPDSESRN VGFPLTNHFYVPRDEVFNDRKKAYFDTNNLKLYIMQKYATFLLHADQQTPFEFDSFADVL SLYDEGSINLPGWLNTFLQPLLGIIPFKLLQQVLTPDSEFILKFPMPAVIREDKTAWQTD EEFAREMLAGTNPVVIRRLGETEFPPKSKLDTSKYHNQNSRITAAHVEKCLEVEGLTVEQ VLADGRLFILDHHDHFMPYLLDANHQPDTFVYATRTLLFHRNDGTLQPAAIELSLPRFEA GSTLISSVGEVYTPASDGVEGHIWQLAKAYVTVNDYSWHQLVSHWLNTHAVMEPFAIATH RQLSVAHPIHKLLHPHYRDNLFINALGRQSLINAGGSSENTVFLGKYGLSMTSEVYRNWN FTEQALPEDFIKRGVAKRRSNGELELLIKDYPYAVDGLAIWSAIETWVRDYCAIYYADDA AVQGDAELQSWWKDVREEGHGDLKDHKWWPEMKTVAELVQSCATIIWIASALHAAVNFGQ YMYAGYVPNRPSVSRRPMPKPGTDLYRELELHPEKEFLLTITKQDLSIAGIALVELLSSH SDDEVYLGQRDSPNWTSDLDAMNAFDRFRERLLEVEKNIVAKNDKGSGFKNRTGPVNIPY NLLFPYASGDAEANTGVTGKGIPNSASI

Transcript Sequence

Transcript ID	Os11t0575600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:21675029:21684772:1 gene:Os11g0575600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 10 description:Similar to Lipoxygenase (Fragment). (Os11t0575600-01)
Sequence	AGTCACCCGGCCCACAGGCCACAGCTACTAGCAGCAGCAGCAAGACTGCAAGAGGGGGGG AAGAAGCTAGGTAGCTAGTAGTACGATGCAGCAGCCGCAGGCGAGCAGCATGACGGCGGC GGCGAGGAGGCGGCAGCTGCAGGGATCGGTGCTCGCCGGGAAGATGGTGCTCGTGCGCAA GGCTCTCGACACCAACTTGAACTCCGGCGACGTCGTGTGCCAGCTCGTCAGCTCCACGGT CGGCGACCCCGACAATGGCAACAGGGGGATGTTGGGCCAGGAGGCATGCGTCCATATCAA CTCGGAGCTACACCCAACTCCCTACGAGGCCTCCACATTCAGCTTCGAGTTCATCTGGGA CATGAAGAAACAGGGTGTCCCCGGAGCGGTCATCGTCAAGAACTATTGCGACGAGGAGTT CTTCGTCAACACCATCACCCTCGACATTGTACCGGGCTATGGAACCATCGTCTTCACCGC TGAGTCGTGGGTTTACCCCGACGAGATATACGACCATCTCCCCCGTGTCTTCTTCAGTAA CCAACCATACCTGCCAAACCAAATGCCGGCGCCGCTGGTGCCGTATAGGGAGGAAGAGCT CCGGAACCTGAGAGGCGACGACAATCCGGGCCCGTACAAGGACCATGACCGTGTCTACCG CTACGACGTCTACAACGACCTCGGCGAGCCAGACAGTGGCAACCCGCGCCCCGTGCTGGG TGGCTCCGACGAGCACCCTTACCCTCGCCGCTGCCGCACCGGCCGGAGGCGGACCAACAC CGACCCCGACTCCGAGAGCCGCAACGTCGGCTTCCCCCTAACCAACCATTTCTACGTGCC CCGCGACGAGGTGTTCAACGACCGCAAGAAGGCCTACTTCGACACCAACAACCTCAAGCT CTATATCATGCAAAAGTACGCCACCTTTCTCTTGCACGCCGACCAGCAGACCCCCTTCGA GTTCGACAGCTTCGCCGACGTGCTAAGCCTCTACGACGAGGGCTCCATCAACCTGCCCGG ATGGCTCAACACTTTCCTCCAACCATTGCTCGGCATAATCCCCTTCAAGTTGCTCCAGCA AGTCCTCACCCCCGATAGCGAGTTCATCCTCAAGTTCCCCATGCCGGCGGTCATCAGGGA GGACAAGACGGCATGGCAAACAGACGAAGAGTTTGCGCGCGAGATGCTCGCCGGCACCAA CCCGGTCGTCATCCGCCGGCTCGGGGAAACCGAGTTCCCGCCCAAGAGCAAGCTAGACAC AAGCAAGTATCACAACCAGAACAGCAGGATCACAGCGGCACACGTCGAGAAGTGCCTCGA GGTCGAGGGCCTCACCGTCGAGCAGGTGCTAGCCGACGGCCGCCTCTTCATCCTCGACCA CCACGACCACTTCATGCCGTACCTGCTCGATGCCAACCATCAACCCGACACTTTCGTCTA CGCGACGAGGACACTGCTCTTCCACCGCAACGATGGCACTCTCCAGCCTGCAGCAATCGA GCTCAGCCTACCTCGCTTTGAGGCCGGCAGCACACTCATCTCGTCCGTCGGCGAGGTCTA CACGCCGGCGTCAGACGGCGTGGAGGGCCACATCTGGCAGCTTGCCAAGGCCTACGTCAC CGTCAATGACTACTCGTGGCACCAGCTCGTCAGCCACTGGCTCAACACGCACGCGGTGAT GGAGCCGTTCGCCATTGCCACGCACCGGCAGCTCAGCGTGGCGCACCCTATCCACAAGCT CCTCCACCCGCACTATCGTGACAACTTGTTTATCAACGCCCTCGGCCGCCAGAGTCTGAT CAACGCCGGTGGTAGCTCCGAGAACACCGTCTTCCTCGGCAAGTATGGGCTCTCCATGAC ATCGGAGGTGTACAGGAACTGGAACTTCACCGAGCAGGCGCTCCCGGAGGACTTCATCAA GAGGGGCGTCGCCAAGCGCCGCTCCAATGGCGAGCTGGAGCTGCTGATCAAGGACTACCC GTACGCCGTCGATGGGCTCGCCATCTGGTCGGCAATCGAGACTTGGGTCCGCGACTATTG TGCCATCTACTACGCGGACGATGCGGCGGTCCAGGGCGACGCCGAGCTGCAGTCGTGGTG GAAAGATGTGCGCGAGGAAGGACACGGAGACCTCAAGGACCACAAATGGTGGCCGGAGAT GAAGACGGTGGCCGAGCTTGTCCAGTCATGCGCCACCATCATCTGGATCGCCTCGGCGCT GCACGCGGCCGTCAACTTCGGCCAGTACATGTACGCCGGCTACGTCCCGAACCGGCCGTC GGTGAGTCGGCGGCCGATGCCGAAGCCGGGCACCGACTTGTACAGGGAGCTGGAGCTCCA CCCGGAGAAGGAATTCCTTCTCACCATCACTAAGCAGGACCTGTCCATAGCTGGCATTGC CCTCGTCGAGCTCCTATCTAGCCATTCCGATGACGAGGTCTACCTCGGGCAGCGCGACTC GCCGAACTGGACGTCCGACCTGGATGCCATGAACGCGTTCGACCGCTTCCGTGAACGGCT CTTGGAGGTGGAGAAGAACATCGTGGCCAAGAACGACAAGGGCAGTGGATTCAAGAACAG GACAGGGCCGGTCAACATCCCCTACAATTTGCTCTTCCCTTATGCCTCCGGCGACGCGGA GGCCAACACCGGGGTCACCGGCAAGGGCATCCCCAACAGCGCTTCCATCTGATCAAGCAC TATACTATACAACAAGGGCAAGCAAGGGGACACATACTCCTTAATTAGCAACATTTCTCT TCTCGTGTAATGTGATAATTCAGTATGGGTCATAAGTTTGTTTATGCAATAAATTAAAAT AAAATCGGACTACCTATAAAACTGTCAAAAGAAAATTTCTCTAAAATATTTCAAATGTAA TTATAGTGTAACTATATTATAATTCAGGTGTAACCGAAATGTAACTTGTCTAATCTTATA GAAAGATCAAGTGGCTAGCATGCATGGTTTGCGGGAGCGAGGTCTAGCAAATCTGAAATA AAATAATTC