Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0574500-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:21608163:21609062:-1 gene:Os11g0574500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 612 description:Similar to F-box domain containing protein, expressed. (Os11t0574500-00)
Sequence

ATGGGGGACTACTTTGTAGCGCTCATCCATTATCCGCTAGCGCAACTTTCATTTGCAAGA
GCAGGGAGTGATAAATGGACTTGGCTGCCTCCTCACACTGATTTCATGGATTGTTTGTTT
GAGGATGGCTTGCTTTATGCACTCAATTCAGCAGGAGAAGTCCATGCGTTTGATCTCAGT
GCCCCTACGGTAACTCAAAAGGTGGTTCTGGAGGATGTAAAGGCATACATCGAGGAGAAC
ATGTACTTTGCTCGAGCTCCCTCTGGTGATTTGTTGCAAATTTGGAGGTCATTGGCCACA
AATCGCGACGATTATTACGTGGATCAGACAGATGGAGATGATTCAGAACATGGATCAGAC
CATAAGAATTGGATTGACGATTATGTGGATCAGACGGATGGAGATGTTCTACAATTTGAG
TTAGACAAGTACGAGGATGATTTGGAACATGCATCAGAACATGAGAATTGGAGGGCTGGA
GATGGTTTGAAGCCTGAGTCAGATGAGGATGAGGATGAGGATGATTTGGAGCCCGAGCCA
AACACTGATTCACTTGTGGTAAATACCAACATGATTAAAGTATTTAAAGTGGATTTTTCT
GCAAAAATGCTTGTGGACATAAACAGCTTAGGTAACAGTGTGTTGTTTCTTGGGTATAAT
CAAACTCTTTGTCTAAATGCTGATGTATATCCACAGTTGAAGCCAAATCATATCTACTTT
ACAGAAGATGATAGCTTATATCTATTTAGGTGTAAGAAGAACCGCCGCGATACTGGAGTC
CTCGACTTGGAAAATGATACCATCGAGCCGATAGTATCTCCGGAGCTTTGGTCCAACTGG
CCAGTCCCTATATGGCTTATACCGAACCCCAGGAAGATGATTTCAGCATCACACAATTAG

Peptide Sequence

PEP ID

Os11t0574500-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:21608163:21609062:-1 gene:Os11g0574500 transcript:Os11t0574500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 612 description:Similar to F-box domain containing protein, expressed. (Os11t0574500-00)
Sequence

MGDYFVALIHYPLAQLSFARAGSDKWTWLPPHTDFMDCLFEDGLLYALNSAGEVHAFDLS
APTVTQKVVLEDVKAYIEENMYFARAPSGDLLQIWRSLATNRDDYYVDQTDGDDSEHGSD
HKNWIDDYVDQTDGDVLQFELDKYEDDLEHASEHENWRAGDGLKPESDEDEDEDDLEPEP
NTDSLVVNTNMIKVFKVDFSAKMLVDINSLGNSVLFLGYNQTLCLNADVYPQLKPNHIYF
TEDDSLYLFRCKKNRRDTGVLDLENDTIEPIVSPELWSNWPVPIWLIPNPRKMISASHN

Transcript Sequence

Transcript ID

Os11t0574500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:21608163:21609062:-1 gene:Os11g0574500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 612 description:Similar to F-box domain containing protein, expressed. (Os11t0574500-00)
Sequence

ATGGGGGACTACTTTGTAGCGCTCATCCATTATCCGCTAGCGCAACTTTCATTTGCAAGA
GCAGGGAGTGATAAATGGACTTGGCTGCCTCCTCACACTGATTTCATGGATTGTTTGTTT
GAGGATGGCTTGCTTTATGCACTCAATTCAGCAGGAGAAGTCCATGCGTTTGATCTCAGT
GCCCCTACGGTAACTCAAAAGGTGGTTCTGGAGGATGTAAAGGCATACATCGAGGAGAAC
ATGTACTTTGCTCGAGCTCCCTCTGGTGATTTGTTGCAAATTTGGAGGTCATTGGCCACA
AATCGCGACGATTATTACGTGGATCAGACAGATGGAGATGATTCAGAACATGGATCAGAC
CATAAGAATTGGATTGACGATTATGTGGATCAGACGGATGGAGATGTTCTACAATTTGAG
TTAGACAAGTACGAGGATGATTTGGAACATGCATCAGAACATGAGAATTGGAGGGCTGGA
GATGGTTTGAAGCCTGAGTCAGATGAGGATGAGGATGAGGATGATTTGGAGCCCGAGCCA
AACACTGATTCACTTGTGGTAAATACCAACATGATTAAAGTATTTAAAGTGGATTTTTCT
GCAAAAATGCTTGTGGACATAAACAGCTTAGGTAACAGTGTGTTGTTTCTTGGGTATAAT
CAAACTCTTTGTCTAAATGCTGATGTATATCCACAGTTGAAGCCAAATCATATCTACTTT
ACAGAAGATGATAGCTTATATCTATTTAGGTGTAAGAAGAACCGCCGCGATACTGGAGTC
CTCGACTTGGAAAATGATACCATCGAGCCGATAGTATCTCCGGAGCTTTGGTCCAACTGG
CCAGTCCCTATATGGCTTATACCGAACCCCAGGAAGATGATTTCAGCATCACACAATTAG