Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0572400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:21475708:21479641:1 gene:Os11g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STLP5 description:Similar to ST3GAL-I sialyltransferase (Fragment). (Os11t0572400-01)
Sequence	ATGGCGAGGGCGCCGCCGCCGCTGTCGTCGTTGCCGCCGCCGCCGCGCCGGCCCACGGTG GTGCTGCTTCTGGGGCTGGCCCTCGCCTTCTGCCTCGCCGTCCTCTCCATCCAGTCCTCA TTCTTCACCGCTCCGAGGCTGGCGAGTAGGCTGGATCTGGACTCCGACGAGGTCCGCGCG CTCTCGGGCTTCCAGTCCCGCGTCCAGCAGTGCGTGGCAAGAAGGGGACTTGGCCTCACA GCAGATATTATTGATCATTGCAAGCTAGTCCTTAGATTTCCTAAAGGAACCAACAGCACT TGGTACAACACTCAGTTCAAATATTTTGAACCACTAGAATACAACTATGATGTCTGTGAA ACTATCCTTCTGTGGGAACAGTACCGTAACATGACGACTGTGTTGACAAGGGAGTACTTA GATGTGCGACCTGATGGGTGGTTGGATTATGCAGCCAAAAGGATTGCACAGCTCGGTGCT GACAAATGCTACAATCGTACTTTGTGCGAAGAGCTTCTTAGTGTTTTACTCCCTGCTAAG CCTCCTTTTCATCCTCGCCAGTTTGCAACATGTGCTGTTGTTGGTAACTCAGGGGATCTC TTGAAAACAGAGTTTGGACAAGAGATTGATGCACATGATGCTGTGTTCCGAGATAATGAA GCACCTGTTAATAAGAAGTATGCAAAATATGTTGGGTTGAAAAGGGACTTTCGACTGGTT GTCAGGGGTGCTGCTCGAAACATGGCGCCAATACTAAAGGGCTCCTCTGATGAGGTTCTT ATTATAAAAAGTTTGACGCACAAAGAAATCAATGCGGTGATAAAGGAACTTCCAAACCCA GTTTATCTTTTTCAAGGCATAGTCTTGAGAAGAGGTGCTAAAGGGACTGGTATGAAGTCA ATAGAATTGGCCCTTTCCATGTGTGATATTATCGACATGTATGGATTCACAGTTGACCCT AACTACACAGAATGGACAAGGTACTTCTCACCCCCAAGGAAAGGACACAATCCACTGCAA GGGCGGGCTTATTATCAACTTCTGGAGTGCCTTGGAGTAATTCGAATCCATTCCCCCATG AGAGCAAAGAGGGTAGAAGATTGGTCGGATATACCTAGCAGGGAAGAGATCAGAACAGCG CATGCTGCGGCTTTTCGTTTAAAAAGGCATGAAACTGGTCAATCTGATCAAATGGGGCCA TTTAGCAACTGCAAGGTATGGGGAACAGTTGACCCAGATTACGGACCTGTATCAGGAACT CCAGACATGAGCGAAACACGAAAGAGCTCAAACTACAAGAAGTGGGAGGTACTCCCATTC GACAGCTTACGAATGGAGGCTCAGGAACACCATGTCCAGATGGGCGGCGTATCTCTGTAC AAGATGGATGGAAACAAGCTAGATGATCTTGTTTGTGTGAGACATGAACGTTCATCTAGT TAA

Peptide Sequence

PEP ID	Os11t0572400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:21475708:21479641:1 gene:Os11g0572400 transcript:Os11t0572400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STLP5 description:Similar to ST3GAL-I sialyltransferase (Fragment). (Os11t0572400-01)
Sequence	MARAPPPLSSLPPPPRRPTVVLLLGLALAFCLAVLSIQSSFFTAPRLASRLDLDSDEVRA LSGFQSRVQQCVARRGLGLTADIIDHCKLVLRFPKGTNSTWYNTQFKYFEPLEYNYDVCE TILLWEQYRNMTTVLTREYLDVRPDGWLDYAAKRIAQLGADKCYNRTLCEELLSVLLPAK PPFHPRQFATCAVVGNSGDLLKTEFGQEIDAHDAVFRDNEAPVNKKYAKYVGLKRDFRLV VRGAARNMAPILKGSSDEVLIIKSLTHKEINAVIKELPNPVYLFQGIVLRRGAKGTGMKS IELALSMCDIIDMYGFTVDPNYTEWTRYFSPPRKGHNPLQGRAYYQLLECLGVIRIHSPM RAKRVEDWSDIPSREEIRTAHAAAFRLKRHETGQSDQMGPFSNCKVWGTVDPDYGPVSGT PDMSETRKSSNYKKWEVLPFDSLRMEAQEHHVQMGGVSLYKMDGNKLDDLVCVRHERSSS

Transcript Sequence

Transcript ID	Os11t0572400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:21475708:21479641:1 gene:Os11g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STLP5 description:Similar to ST3GAL-I sialyltransferase (Fragment). (Os11t0572400-01)
Sequence	GTGGAGTGAAGCGGAGGAGAAGGAAGCATCGCATCCGCCTCCGATCCGGCGATGGCGAGG GCGCCGCCGCCGCTGTCGTCGTTGCCGCCGCCGCCGCGCCGGCCCACGGTGGTGCTGCTT CTGGGGCTGGCCCTCGCCTTCTGCCTCGCCGTCCTCTCCATCCAGTCCTCATTCTTCACC GCTCCGAGGCTGGCGAGTAGGCTGGATCTGGACTCCGACGAGGTCCGCGCGCTCTCGGGC TTCCAGTCCCGCGTCCAGCAGTGCGTGGCAAGAAGGGGACTTGGCCTCACAGCAGATATT ATTGATCATTGCAAGCTAGTCCTTAGATTTCCTAAAGGAACCAACAGCACTTGGTACAAC ACTCAGTTCAAATATTTTGAACCACTAGAATACAACTATGATGTCTGTGAAACTATCCTT CTGTGGGAACAGTACCGTAACATGACGACTGTGTTGACAAGGGAGTACTTAGATGTGCGA CCTGATGGGTGGTTGGATTATGCAGCCAAAAGGATTGCACAGCTCGGTGCTGACAAATGC TACAATCGTACTTTGTGCGAAGAGCTTCTTAGTGTTTTACTCCCTGCTAAGCCTCCTTTT CATCCTCGCCAGTTTGCAACATGTGCTGTTGTTGGTAACTCAGGGGATCTCTTGAAAACA GAGTTTGGACAAGAGATTGATGCACATGATGCTGTGTTCCGAGATAATGAAGCACCTGTT AATAAGAAGTATGCAAAATATGTTGGGTTGAAAAGGGACTTTCGACTGGTTGTCAGGGGT GCTGCTCGAAACATGGCGCCAATACTAAAGGGCTCCTCTGATGAGGTTCTTATTATAAAA AGTTTGACGCACAAAGAAATCAATGCGGTGATAAAGGAACTTCCAAACCCAGTTTATCTT TTTCAAGGCATAGTCTTGAGAAGAGGTGCTAAAGGGACTGGTATGAAGTCAATAGAATTG GCCCTTTCCATGTGTGATATTATCGACATGTATGGATTCACAGTTGACCCTAACTACACA GAATGGACAAGGTACTTCTCACCCCCAAGGAAAGGACACAATCCACTGCAAGGGCGGGCT TATTATCAACTTCTGGAGTGCCTTGGAGTAATTCGAATCCATTCCCCCATGAGAGCAAAG AGGGTAGAAGATTGGTCGGATATACCTAGCAGGGAAGAGATCAGAACAGCGCATGCTGCG GCTTTTCGTTTAAAAAGGCATGAAACTGGTCAATCTGATCAAATGGGGCCATTTAGCAAC TGCAAGGTATGGGGAACAGTTGACCCAGATTACGGACCTGTATCAGGAACTCCAGACATG AGCGAAACACGAAAGAGCTCAAACTACAAGAAGTGGGAGGTACTCCCATTCGACAGCTTA CGAATGGAGGCTCAGGAACACCATGTCCAGATGGGCGGCGTATCTCTGTACAAGATGGAT GGAAACAAGCTAGATGATCTTGTTTGTGTGAGACATGAACGTTCATCTAGTTAAGTCAGC ACTTAATCTTTGCCTGGAGATGGCATCTTGACCCTGTGGTAATCTTCAGAGGCATATCTA CTTGTCAGTTGTAAGATCACAAGAGGCAAAGGATTGAGGCTATTCTTTAGGGTTTCTCAT TCCCCTGACAGAAAATATTCTTTTATTGGTTTCTTAGCGACTTTGTAGGGATATTTGCTT AATCAGTCGGAAGAATGTTCCGCTATGGGTACAGCTGTAACGATTTTGGTGCCACTTGCA ACATGTACTAGCCATCACGCAATTCTGAACTGCAGTTTTGTTGTTGAGCTAGTAACCTAC ACCCTGAATTGTAGTACTATAGTTTTTGTTGTTGACACATGTTTTCATTTCACAATGCCA TATAAGTGAAAGTCATGTTTGTTTTGTTATTG