Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0570400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:21324041:21324977:-1 gene:Os11g0570400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0570400-01)
Sequence

ATGGCTTCATTCACGCCTAATTGCTCTACGTTGTTCTTTTTCCTTGTCTTCCTTGCTGCA
GTATTCGTCTCTGCTGCGGCAGCCTCCGAGCACGGCCGGGTGTTGGAGGAGGATCAGAAC
ATTCGGTACCGTGTGGAGGACTCGGAACTTCCGGACCTCTACTACGAAATCTGCATGTAT
GCGAGGGAGCACAGGCCATGTAGGAGGGTGATGGCCACCATCCCGGATCTAAAATTCAAG
CTCTCCGGCCAGGTTGATTTAGCCTTGCTGCTCTCTCACGTCATAGCCAACCGGAGCGCC
GAGGCCAAGGCCCTGGCCGATCCGTTGCTCGCCGCCGCCGCCGCAAAGAAGGGCGGTGAT
GAGCTCCCCAAGTGTCTCGCATCCTGCGCCGCCAGCCTCGACGACGTGTCCAAGGCCATG
TCCGGGCTCCCCGCGGATATCGATGTCGAGAGGTACCCGAAAGTCCAGAGCTTCCTCCGC
AACAAGTTCGAATCGGGCGCCGCTCCCCCACTATGCAAGAGCGGCTGCCCCGACAAGACT
TCCACCGCCGATGAGGCCGCCATCGCCGACAAGTTTCATGCCATCTGGGCGCTCATGGAT
TGCGCAGAGACACTCGCCCAATACTACGTCCTCCCTCCGCCTCCGCCGCCAAAACGCTAA

Peptide Sequence

PEP ID

Os11t0570400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:21324041:21324977:-1 gene:Os11g0570400 transcript:Os11t0570400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0570400-01)
Sequence

MASFTPNCSTLFFFLVFLAAVFVSAAAASEHGRVLEEDQNIRYRVEDSELPDLYYEICMY
AREHRPCRRVMATIPDLKFKLSGQVDLALLLSHVIANRSAEAKALADPLLAAAAAKKGGD
ELPKCLASCAASLDDVSKAMSGLPADIDVERYPKVQSFLRNKFESGAAPPLCKSGCPDKT
STADEAAIADKFHAIWALMDCAETLAQYYVLPPPPPPKR

Transcript Sequence

Transcript ID

Os11t0570400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:21324041:21324977:-1 gene:Os11g0570400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0570400-01)
Sequence

ATCGTGGCGTAGAGGAAAACAGCTTGATTCTAATTAACGACCATGGCTTCATTCACGCCT
AATTGCTCTACGTTGTTCTTTTTCCTTGTCTTCCTTGCTGCAGTATTCGTCTCTGCTGCG
GCAGCCTCCGAGCACGGCCGGGTGTTGGAGGAGGATCAGAACATTCGGTACCGTGTGGAG
GACTCGGAACTTCCGGACCTCTACTACGAAATCTGCATGTATGCGAGGGAGCACAGGCCA
TGTAGGAGGGTGATGGCCACCATCCCGGATCTAAAATTCAAGCTCTCCGGCCAGGTTGAT
TTAGCCTTGCTGCTCTCTCACGTCATAGCCAACCGGAGCGCCGAGGCCAAGGCCCTGGCC
GATCCGTTGCTCGCCGCCGCCGCCGCAAAGAAGGGCGGTGATGAGCTCCCCAAGTGTCTC
GCATCCTGCGCCGCCAGCCTCGACGACGTGTCCAAGGCCATGTCCGGGCTCCCCGCGGAT
ATCGATGTCGAGAGGTACCCGAAAGTCCAGAGCTTCCTCCGCAACAAGTTCGAATCGGGC
GCCGCTCCCCCACTATGCAAGAGCGGCTGCCCCGACAAGACTTCCACCGCCGATGAGGCC
GCCATCGCCGACAAGTTTCATGCCATCTGGGCGCTCATGGATTGCGCAGAGACACTCGCC
CAATACTACGTCCTCCCTCCGCCTCCGCCGCCAAAACGCTAATTAATTAATTGACCTACT
ACTACGTACGACAGGGAACATGGTCGTCATCACTCATCATATTGCAGACAAATACTGCAT
GCGTCCATTCCAAGTTTTTTTTTTGATAATCGATTAAGTTCTCAAATCAATTATATGTAC
TCCTATACTTGGAGACTGATTACAGTACATTTATATCGCAGTTCGTTCATTCACATGTAC
TCGCAAGTGCTATATATATTATATTTTGATATGAGAT