Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0569600-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:21261123:21265839:-1 gene:Os11g0569600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Receptor kinase-like protein. (Os11t0569600-01)
Sequence

ATGGCGAGATCACTCGCGTTGCTCATGCTCCTGTTCAATTCCTCGCTGCTGCTCCCTCCG
GCGAGCAGCGACGACGACGCCGCTGCTGCCGCCGTTCCCACGGGCGGCGCCGCCGCCGAC
GAGCTCGCGCTGCTCTCCTTCAGGTCGTCTCTTGTGTCCCAGGGGGGCTCGTCGCTGGCA
TCATGGAACACTACGTCCGGCCACGGCCAGCACTGCACATGGGCGGGTGTCGCGTGCGGC
GGCCGGCGGGACAGGGTGGTCGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATC
TCGCCGTCGCTGGGCAACCTCTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTC
TCCGGCGAGATACCGCCGGAGCTCGGCCGCCTAAGCAGGCTCCGGCGGTTGAACATGAGT
GGCAACTCCCTCCAAGGGAGCATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAG
ATGGACCTCACCATCAACCAGCTCGAAGGTAAAATTCCCCTCCAGATTGGCGCCTCCATG
AAAAATCTTGCCTACCTGTATCTCGAAGGAAATCGCCTGTCGGGACAGATCCCTCGATCG
TTGGCAGAGCTGCCATCGATCCAAGAACTGTCACTAGGTAGCAACGGGCTATCAGGTGAG
ATTCCACCTGCTCTGGGCAATCTCACTGGCCTCTCGTTTCTTTCACTGTCAGAAAATTCA
CTCTCTGGAGGTATCCCTTCGTCTCTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTG
AACAAGAATACACTGTCTGGAACAATCCCTTCGTGCTTGGGCAATCTCAACAGCCTCTTG
GAGCTTGCTCTGTCTGACAACACGCTGTCTGGAGCAATCCCTTCATCTCTGGGTCGATTG
TCTAGATTGTCTTCCCTTCACTTAAGCTCTAACAATTTAAGTGGACTGATCCCGGATCCT
ATTTGGAACATCTCCTCTCTCACCGTGTTCGGTGTCCAGTACAACATGCTGAGTGGTATG
CTTCCTGCAAATGCATTCAGTACACTTCCCCATCTCCAAGAGGTATACATGGATAACAAC
CAGTTTCATGGGCATATCCCTGCATCAGTAGCTAATGCTTCCAACATCTCCATGCTTACC
TTTGGTGTTAATTCTTTTAGCGGTGTTGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTC
GGCACGCTGGTTCTTGCGGAAACCCTTCTGGAAGCTGAAGGACCAAACGATTGGAAATTC
ATGACGGCATTGACGAATTGCTCCAATCTCCAACACGTAGAAATGGGTGCCTGCAAGTTT
GGTGGTGTTCTTCCTGACTCTGTTTCCAATCTTTCCTCATCACTAGTATATCTCTCTATT
GGAGCCAATAAAATTTCAGGAAGCTTGCCTAGAGATATTGGTAATCTCATTAATCTAGAA
TCCCTTGTTCTCTTTAACAACTCCTTGACAGGATCTCTTCCATCTTCCTTCAGCAAGCTT
AAAAATTTGCATCGTCTCATTCTATTCAACAACAAATTAAGTGGTTATCTGCAATTGACC
ATCGGTAATCTTACACAAATAACTAACTTGGAGCTCTATGGTAATGCCTTCAGTGGCACA
ATACCAAGCACACTTGGAAACATGACCAGATTGTTTGAACTAAATCTTGCCCACAATAAC
TTTATAGGAGCAATTCCCACTGAAATATTTAGCATTCCCACACTCTCTGAAACTTTGGAT
GTGTCCCATAATAAATTGGAGGGATCAATACCAAAAGAAATAGGAGAACTTAAAAATATT
GTTGAATTCCATGCGGATTCGAACAAATTATCGGGTGAAATCCCCAGCACCATTAGTGGA
TGCCAACTTCTACAGCATCTCTCCCTGCAAAACAATTTCTTAAATGGCAACATCCCAATT
GCTCTGACTCAGTTGGCAGGTCTTGACACACTTGATCTCTCAGGGAACAATTTGTCAGGT
CAGATACCCAAGTCCTTAGGGGACATGCCTCTGCTCCACTCGCTGAACCTTTCATTCAAC
AGCTTTCAAGGAGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTATATC
CAAGGCAATGCCAATATTTGCGGTGGCATACCTGAACTACGTCTTCCGCAGTGTTCCTTA
AAATCAACAAAGAAAAAGAAACATCAAATTCTACTGATAGCTCTTACTGTCTGTCTCGTT
TCGACACTTGCGATCTTTTCATTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAG
AAAGAAGTCCCTGCTATGACATCCATCCAAGGCCACCCAATGATCACTTACAAGCAGCTG
GTAAAAGCAACAGATGGTTTTTCACCAGCCAATTTGTTGGGTTCTGGATCCTTTGGCTCT
GTTTACAAAGGAGAACTTGATAGCCAACATGGTGAAAGTACAAGTTCTGTTGCAGTCAAG
GTACTAAAGCTTGAAACTCCTAAGGCAGTCAAGAGTTTCACTGCCGAATGTGAAGCACTA
CGAAATATGCGTCATCGGAATCTTGTCAAGATAGTTACTATTTGCTCAAGCATTGATAAC
AAAGGGAATGATTTCAAAGCAATTGTGTATGACTTCATGCCCAACGGCAGTCTAGAAGAT
TGGCTACACCCTGAAACAAATTGTGATCAAGCAGAGCAGAGGCACTTAAATTTGCATCAA
AGAGTGAACATACTACTTGATGTCGCCTGTGCATTGGACTATCTTCACTGCCTTGGACCT
GAATCTGTTGTACATTGTGATATTAAATCAAGTAATGTGTTGTTAGATGCTGACATGGTA
GCCCATGTTGGAGACTTTGGACTTGCAAGAATTCTAGTTAAGGAAAGCTCATTGATGCAA
CAGTCAACAAGCTCGATGGGATTCAGAGGGACAATTGGTTACGCAGCACCAGAGTATGGT
GTCGGGAACATTGCGTCCACACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAA
ACAGTAAGCGGAAAGCGACCAACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAG
TATGTTGAACCGGGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTG
GATTCTAAGAGTTGGGTTCAGACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGC
CTTGTTTCACTGCTTAGACTTGGGTTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATG
CAAACCGGAGATGTCATCAGTGAACTGCATGACATCAAAGAGTCTCTCTCGATGGCATCC
ATCATGTGA

Peptide Sequence

PEP ID

Os11t0569600-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:21261123:21265839:-1 gene:Os11g0569600 transcript:Os11t0569600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Receptor kinase-like protein. (Os11t0569600-01)
Sequence

MARSLALLMLLFNSSLLLPPASSDDDAAAAAVPTGGAAADELALLSFRSSLVSQGGSSLA
SWNTTSGHGQHCTWAGVACGGRRDRVVELRLRSFNLSGTISPSLGNLSFLAKLHLGGNHL
SGEIPPELGRLSRLRRLNMSGNSLQGSIPAAIGGCFRLIEMDLTINQLEGKIPLQIGASM
KNLAYLYLEGNRLSGQIPRSLAELPSIQELSLGSNGLSGEIPPALGNLTGLSFLSLSENS
LSGGIPSSLCNLTSLSSLYLNKNTLSGTIPSCLGNLNSLLELALSDNTLSGAIPSSLGRL
SRLSSLHLSSNNLSGLIPDPIWNISSLTVFGVQYNMLSGMLPANAFSTLPHLQEVYMDNN
QFHGHIPASVANASNISMLTFGVNSFSGVVPEEIGRLRNLGTLVLAETLLEAEGPNDWKF
MTALTNCSNLQHVEMGACKFGGVLPDSVSNLSSSLVYLSIGANKISGSLPRDIGNLINLE
SLVLFNNSLTGSLPSSFSKLKNLHRLILFNNKLSGYLQLTIGNLTQITNLELYGNAFSGT
IPSTLGNMTRLFELNLAHNNFIGAIPTEIFSIPTLSETLDVSHNKLEGSIPKEIGELKNI
VEFHADSNKLSGEIPSTISGCQLLQHLSLQNNFLNGNIPIALTQLAGLDTLDLSGNNLSG
QIPKSLGDMPLLHSLNLSFNSFQGEVPTNGVFANASEIYIQGNANICGGIPELRLPQCSL
KSTKKKKHQILLIALTVCLVSTLAIFSLLYMLLTCHKRRKKEVPAMTSIQGHPMITYKQL
VKATDGFSPANLLGSGSFGSVYKGELDSQHGESTSSVAVKVLKLETPKAVKSFTAECEAL
RNMRHRNLVKIVTICSSIDNKGNDFKAIVYDFMPNGSLEDWLHPETNCDQAEQRHLNLHQ
RVNILLDVACALDYLHCLGPESVVHCDIKSSNVLLDADMVAHVGDFGLARILVKESSLMQ
QSTSSMGFRGTIGYAAPEYGVGNIASTHGDIYSYGILVLETVSGKRPTDTTFGPGLSLRQ
YVEPGLHGRLMDVVDRKLVLDSKSWVQTPDISPCKEINECLVSLLRLGLSCSQELPSSRM
QTGDVISELHDIKESLSMASIM

Transcript Sequence

Transcript ID

Os11t0569600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:21261123:21265839:-1 gene:Os11g0569600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Receptor kinase-like protein. (Os11t0569600-01)
Sequence

GATCATCGATAGCTACTCTTGCAGAGATCGACACGCACGCATGGCGAGATCACTCGCGTT
GCTCATGCTCCTGTTCAATTCCTCGCTGCTGCTCCCTCCGGCGAGCAGCGACGACGACGC
CGCTGCTGCCGCCGTTCCCACGGGCGGCGCCGCCGCCGACGAGCTCGCGCTGCTCTCCTT
CAGGTCGTCTCTTGTGTCCCAGGGGGGCTCGTCGCTGGCATCATGGAACACTACGTCCGG
CCACGGCCAGCACTGCACATGGGCGGGTGTCGCGTGCGGCGGCCGGCGGGACAGGGTGGT
CGAGCTGCGGCTGCGATCGTTCAACCTGTCCGGGACCATCTCGCCGTCGCTGGGCAACCT
CTCCTTCCTCGCTAAGCTGCACCTCGGCGGCAACCACCTCTCCGGCGAGATACCGCCGGA
GCTCGGCCGCCTAAGCAGGCTCCGGCGGTTGAACATGAGTGGCAACTCCCTCCAAGGGAG
CATCCCCGCCGCCATTGGAGGCTGCTTTCGTCTCATCGAGATGGACCTCACCATCAACCA
GCTCGAAGGTAAAATTCCCCTCCAGATTGGCGCCTCCATGAAAAATCTTGCCTACCTGTA
TCTCGAAGGAAATCGCCTGTCGGGACAGATCCCTCGATCGTTGGCAGAGCTGCCATCGAT
CCAAGAACTGTCACTAGGTAGCAACGGGCTATCAGGTGAGATTCCACCTGCTCTGGGCAA
TCTCACTGGCCTCTCGTTTCTTTCACTGTCAGAAAATTCACTCTCTGGAGGTATCCCTTC
GTCTCTGTGCAATCTCACCAGCCTCTCCTCTCTCTATCTGAACAAGAATACACTGTCTGG
AACAATCCCTTCGTGCTTGGGCAATCTCAACAGCCTCTTGGAGCTTGCTCTGTCTGACAA
CACGCTGTCTGGAGCAATCCCTTCATCTCTGGGTCGATTGTCTAGATTGTCTTCCCTTCA
CTTAAGCTCTAACAATTTAAGTGGACTGATCCCGGATCCTATTTGGAACATCTCCTCTCT
CACCGTGTTCGGTGTCCAGTACAACATGCTGAGTGGTATGCTTCCTGCAAATGCATTCAG
TACACTTCCCCATCTCCAAGAGGTATACATGGATAACAACCAGTTTCATGGGCATATCCC
TGCATCAGTAGCTAATGCTTCCAACATCTCCATGCTTACCTTTGGTGTTAATTCTTTTAG
CGGTGTTGTTCCTGAGGAAATCGGGAGGCTGAGAAATCTCGGCACGCTGGTTCTTGCGGA
AACCCTTCTGGAAGCTGAAGGACCAAACGATTGGAAATTCATGACGGCATTGACGAATTG
CTCCAATCTCCAACACGTAGAAATGGGTGCCTGCAAGTTTGGTGGTGTTCTTCCTGACTC
TGTTTCCAATCTTTCCTCATCACTAGTATATCTCTCTATTGGAGCCAATAAAATTTCAGG
AAGCTTGCCTAGAGATATTGGTAATCTCATTAATCTAGAATCCCTTGTTCTCTTTAACAA
CTCCTTGACAGGATCTCTTCCATCTTCCTTCAGCAAGCTTAAAAATTTGCATCGTCTCAT
TCTATTCAACAACAAATTAAGTGGTTATCTGCAATTGACCATCGGTAATCTTACACAAAT
AACTAACTTGGAGCTCTATGGTAATGCCTTCAGTGGCACAATACCAAGCACACTTGGAAA
CATGACCAGATTGTTTGAACTAAATCTTGCCCACAATAACTTTATAGGAGCAATTCCCAC
TGAAATATTTAGCATTCCCACACTCTCTGAAACTTTGGATGTGTCCCATAATAAATTGGA
GGGATCAATACCAAAAGAAATAGGAGAACTTAAAAATATTGTTGAATTCCATGCGGATTC
GAACAAATTATCGGGTGAAATCCCCAGCACCATTAGTGGATGCCAACTTCTACAGCATCT
CTCCCTGCAAAACAATTTCTTAAATGGCAACATCCCAATTGCTCTGACTCAGTTGGCAGG
TCTTGACACACTTGATCTCTCAGGGAACAATTTGTCAGGTCAGATACCCAAGTCCTTAGG
GGACATGCCTCTGCTCCACTCGCTGAACCTTTCATTCAACAGCTTTCAAGGAGAAGTGCC
AACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTATATCCAAGGCAATGCCAATATTTG
CGGTGGCATACCTGAACTACGTCTTCCGCAGTGTTCCTTAAAATCAACAAAGAAAAAGAA
ACATCAAATTCTACTGATAGCTCTTACTGTCTGTCTCGTTTCGACACTTGCGATCTTTTC
ATTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTCCCTGCTATGAC
ATCCATCCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCAACAGATGGTTT
TTCACCAGCCAATTTGTTGGGTTCTGGATCCTTTGGCTCTGTTTACAAAGGAGAACTTGA
TAGCCAACATGGTGAAAGTACAAGTTCTGTTGCAGTCAAGGTACTAAAGCTTGAAACTCC
TAAGGCAGTCAAGAGTTTCACTGCCGAATGTGAAGCACTACGAAATATGCGTCATCGGAA
TCTTGTCAAGATAGTTACTATTTGCTCAAGCATTGATAACAAAGGGAATGATTTCAAAGC
AATTGTGTATGACTTCATGCCCAACGGCAGTCTAGAAGATTGGCTACACCCTGAAACAAA
TTGTGATCAAGCAGAGCAGAGGCACTTAAATTTGCATCAAAGAGTGAACATACTACTTGA
TGTCGCCTGTGCATTGGACTATCTTCACTGCCTTGGACCTGAATCTGTTGTACATTGTGA
TATTAAATCAAGTAATGTGTTGTTAGATGCTGACATGGTAGCCCATGTTGGAGACTTTGG
ACTTGCAAGAATTCTAGTTAAGGAAAGCTCATTGATGCAACAGTCAACAAGCTCGATGGG
ATTCAGAGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACATTGCGTCCAC
ACATGGAGATATTTATAGTTACGGAATTCTAGTGTTGGAAACAGTAAGCGGAAAGCGACC
AACCGATACTACATTCGGACCTGGATTGAGCCTCCGTCAGTATGTTGAACCGGGTCTACA
TGGTAGACTGATGGATGTTGTTGACAGGAAGCTCGTTTTGGATTCTAAGAGTTGGGTTCA
GACTCCAGATATTTCTCCATGCAAAGAAATCAATGAGTGCCTTGTTTCACTGCTTAGACT
TGGGTTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAATGCAAACCGGAGATGTCATCAG
TGAACTGCATGACATCAAAGAGTCTCTCTCGATGGCATCCATCATGTGAAATCATGTTAG
AAATGTTCTTTAGAACAGATTTCTGCAGTGTTATTTACAACAGAGGAGTTATCTGAAGGG
TGATTAATTTCTTGGTAATAGCTGTTTCCTGATCTGCACATCAGAACATTTCTCTATACT
TGTATTTCTGAGAATTGCCGCACCTAATTAAGTACGATAGTAAATATTAATGCATACTCG
TACTGCGTGGTATGTACTGATAACATGTCACTCTTTTAC