Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0568800-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:21213554:21216313:-1 gene:Os11g0568800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype domain containing protein. (Os11t0568800-00)
Sequence	ATGGCAAGAGCAACAGCATTGCTCTGCTCCTCACTGCTGTTGCTGTCCTGTTTCTACGCC CAGGTTTCTCCAGGGAGCAGCAGCAGCAGCAGAAGTACTGCCATGGCGGATGAGCCTGCG CTCCTCTCGTTCAAGTCCATGCTGCTGTCTGATGGCTTCCTGGCATCATGGAACGCTTCA AGCCACTACTGCAGCTGGCCGGGAGTTGTGTGCGGCGGCCGGCATCCCGAGAGGGTTGTG GCGTTGCAAATGAGCTCGTTCAACCTGTCTGGAAGGATCTCTCCGTCATTGGGCAACCTG TCCTTGCTCAGGGAGCTGGAACTTGGTGACAACCAGTTCACCGGGGACATACCTCCAGAG ATCGGGCAACTCACCAGGCTTAGGATGCTGAACCTAAGCTCGAACTATCTCCAAGGAAGC ATCCCGGCTTCCATTGGAGAATGTGCCGAGCTCATGTCGATTGACCTAGGCAACAACCAG CTCCAAGGTGAGATCCCAGCCGAGCTAGGTGCGTTGAAGAATCTTGTCAGGTTGGGCCTT CATGAAAATGCTTTGTCAGGAGAGATCCCTCGGTCTCTGGCAGATTTGCAATCGTTGGGC GCCCTATCTTTGTTCAAGAACAGGCTGCACGGTGAGATACCGCCTGGTTTGGGCAATCTC ACCAACCTCTATCATCTTCTTCTTGCACACAACATGCTATCAGGAGCCATCCCATCATCC CTTGGCATGCTCTCTGGATTGTCATGGCTTGAGCTAGGCTTCAACAATCTAACCGGGCTG ATCCCCTCTTCCATCTGGAATGTTTCCTCTCTGACAGAGCTTAATCTCCAGCAAAACATG TTGCATGGGACGATGCCTCCTGATGTGTTCAACTCTCTTCCTCATCTGCAGCACTTGTAC ATTAACGACAACCAGTTTCATGGCAACATCCCTGTATCAATAGGTAACGTGTCCGCTTTG TCGCGGATACAGATTGGTTTCAACTCTTTCGGTGGAATCATTCCTCCGGAGGTTGGAAGG TTAAGAAACCTCACTTCGCTAGAAGCTGAGCACACATTCCTTGAAGCTAAAGATCAGAAA GGATGGGGATTCATATCTGCGTTAACGAATTGCTCCAAGTTGCAAGCTTTGTTCCTGGGC AACAATAGGTTTGAAGGGGTACTTCCTGTTTCAATCTCAAACCTTTCAGTTTATCTTGAA TACCTCTATCTTGATTTTAATGCAATATCTGGAAGCTTGCCTGAAGAGATTGGTAACCTC GTTAGGTTAGAAGCTCTTCTACTCCATAACAACTCTTTCACGGGAATTCTTCCGTCATCG TTGGGCAGGCTTAAAAATCTGCAAGTTTTATATATAGACAATAATAAAATAAGTGGATCA ATCCCATTAGCCATAGGGAATCTTACAGAACTAAATTATTTCCGCCTTGATGTGAATGCC TTCACTGGTAGGATACCAAGTGCACTTGGAAACCTGACAAACCTAGTGGAACTAGGTCTT TCAAGCAATAATTTCACAGGTTCTATTCCTGTTGAAATATTTAAGATTCACACGTTGTCG TTAACTTTGGATATATCCAATAACAACTTGGAAGGATCAATACCACAAGAAATCGGGGGC TTGAAAAATCTTGTTCAATTCTATGCAGATTCCAACAAGTTATCAGGTGAAATCCCTAGC ACCCTTGGTGAATGCCAACTTCTCCAGAATATATCTCTCCAAAATAATTTCTTGAGCGGT AGCGTTCCATCACTCCTGAGTCAATTGAAAGGTCTACAAATTCTTGATCTTTCCAATAAC AACTTGTCAGGTCAAATACCCACATTCCTGTCAAACCTTACCATGCTCAGTTATCTCAAC CTTTCATTCAATGACTTTAGTGGTGAAGTACCAACTTTTGGTGTCTTTTCGAATCCTTCC GCAATTTCCATCCATGGAAATGGCAAACTTTGTGGTGGCATACCAGATCTACATTTGCCT AGATGCTCTTCACAGTCACCACACAGAAGGCAAAAACTTCTGGTAATTCCTATTGTTGTT TCTCTTGCTGTAACATTACTACTCCTCTTATTGCTCTACAAGCTTCTCTATTGGCGTAAG AATATAAAAACAAACATCCCATCTACCACATCCATGGAAGGCCATCCCTTGATCTCTCAC TCCCAGCTGGTAAGAGCAACAGATAATTTCTCAGCAACCAATTTGTTGGGATCAGGATCA TTTGGGTCTGTGTACAAAGGAGAAATAAATAATCAAGCTGGTGAAAGTAAAGATATAGCT GTGAAAGTGCTAAAACTCCAAACCCCTGGCGCACTCAAAAGTTTCATAGCCGAATGCGAA GCACTGCGAAACCTATGGCATCGGAACCTTGTCAAAATAATTACAGCTTGCTCAAGCATT GATAACAGTGGCAATGACTTCAAAGCAATTGTGTTCGAGTTCATGCCTAATGGCAGTTTA GATGGTTGGCTACATCCTGACAATAATGATCATACAGAGCAAAGGTACTTGAATATCCTG GAAAGAGTGAGCATACTCCTTGATGTGGCTTATGCATTGGATTATCTTCATTGCCATGGC CCTGCCCCTGTGATACATTGTGATATTAAGTCAAGTAATGTTCTCTTGGATTCTGACATG GTGGCTCGTGTTGGAGACTTTGGACTTGCAAGGATTCTTGATGAGCAAAACTCAGTTTTC CAACCCTCGACGAACTCAATACTATTTAGAGGGACGATTGGCTATGCTGCCCCAGGTTAG

Peptide Sequence

PEP ID	Os11t0568800-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:21213554:21216313:-1 gene:Os11g0568800 transcript:Os11t0568800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype domain containing protein. (Os11t0568800-00)
Sequence	MARATALLCSSLLLLSCFYAQVSPGSSSSSRSTAMADEPALLSFKSMLLSDGFLASWNAS SHYCSWPGVVCGGRHPERVVALQMSSFNLSGRISPSLGNLSLLRELELGDNQFTGDIPPE IGQLTRLRMLNLSSNYLQGSIPASIGECAELMSIDLGNNQLQGEIPAELGALKNLVRLGL HENALSGEIPRSLADLQSLGALSLFKNRLHGEIPPGLGNLTNLYHLLLAHNMLSGAIPSS LGMLSGLSWLELGFNNLTGLIPSSIWNVSSLTELNLQQNMLHGTMPPDVFNSLPHLQHLY INDNQFHGNIPVSIGNVSALSRIQIGFNSFGGIIPPEVGRLRNLTSLEAEHTFLEAKDQK GWGFISALTNCSKLQALFLGNNRFEGVLPVSISNLSVYLEYLYLDFNAISGSLPEEIGNL VRLEALLLHNNSFTGILPSSLGRLKNLQVLYIDNNKISGSIPLAIGNLTELNYFRLDVNA FTGRIPSALGNLTNLVELGLSSNNFTGSIPVEIFKIHTLSLTLDISNNNLEGSIPQEIGG LKNLVQFYADSNKLSGEIPSTLGECQLLQNISLQNNFLSGSVPSLLSQLKGLQILDLSNN NLSGQIPTFLSNLTMLSYLNLSFNDFSGEVPTFGVFSNPSAISIHGNGKLCGGIPDLHLP RCSSQSPHRRQKLLVIPIVVSLAVTLLLLLLLYKLLYWRKNIKTNIPSTTSMEGHPLISH SQLVRATDNFSATNLLGSGSFGSVYKGEINNQAGESKDIAVKVLKLQTPGALKSFIAECE ALRNLWHRNLVKIITACSSIDNSGNDFKAIVFEFMPNGSLDGWLHPDNNDHTEQRYLNIL ERVSILLDVAYALDYLHCHGPAPVIHCDIKSSNVLLDSDMVARVGDFGLARILDEQNSVF QPSTNSILFRGTIGYAAPG

Transcript Sequence

Transcript ID	Os11t0568800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:21213554:21216313:-1 gene:Os11g0568800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype domain containing protein. (Os11t0568800-00)
Sequence	ATGGCAAGAGCAACAGCATTGCTCTGCTCCTCACTGCTGTTGCTGTCCTGTTTCTACGCC CAGGTTTCTCCAGGGAGCAGCAGCAGCAGCAGAAGTACTGCCATGGCGGATGAGCCTGCG CTCCTCTCGTTCAAGTCCATGCTGCTGTCTGATGGCTTCCTGGCATCATGGAACGCTTCA AGCCACTACTGCAGCTGGCCGGGAGTTGTGTGCGGCGGCCGGCATCCCGAGAGGGTTGTG GCGTTGCAAATGAGCTCGTTCAACCTGTCTGGAAGGATCTCTCCGTCATTGGGCAACCTG TCCTTGCTCAGGGAGCTGGAACTTGGTGACAACCAGTTCACCGGGGACATACCTCCAGAG ATCGGGCAACTCACCAGGCTTAGGATGCTGAACCTAAGCTCGAACTATCTCCAAGGAAGC ATCCCGGCTTCCATTGGAGAATGTGCCGAGCTCATGTCGATTGACCTAGGCAACAACCAG CTCCAAGGTGAGATCCCAGCCGAGCTAGGTGCGTTGAAGAATCTTGTCAGGTTGGGCCTT CATGAAAATGCTTTGTCAGGAGAGATCCCTCGGTCTCTGGCAGATTTGCAATCGTTGGGC GCCCTATCTTTGTTCAAGAACAGGCTGCACGGTGAGATACCGCCTGGTTTGGGCAATCTC ACCAACCTCTATCATCTTCTTCTTGCACACAACATGCTATCAGGAGCCATCCCATCATCC CTTGGCATGCTCTCTGGATTGTCATGGCTTGAGCTAGGCTTCAACAATCTAACCGGGCTG ATCCCCTCTTCCATCTGGAATGTTTCCTCTCTGACAGAGCTTAATCTCCAGCAAAACATG TTGCATGGGACGATGCCTCCTGATGTGTTCAACTCTCTTCCTCATCTGCAGCACTTGTAC ATTAACGACAACCAGTTTCATGGCAACATCCCTGTATCAATAGGTAACGTGTCCGCTTTG TCGCGGATACAGATTGGTTTCAACTCTTTCGGTGGAATCATTCCTCCGGAGGTTGGAAGG TTAAGAAACCTCACTTCGCTAGAAGCTGAGCACACATTCCTTGAAGCTAAAGATCAGAAA GGATGGGGATTCATATCTGCGTTAACGAATTGCTCCAAGTTGCAAGCTTTGTTCCTGGGC AACAATAGGTTTGAAGGGGTACTTCCTGTTTCAATCTCAAACCTTTCAGTTTATCTTGAA TACCTCTATCTTGATTTTAATGCAATATCTGGAAGCTTGCCTGAAGAGATTGGTAACCTC GTTAGGTTAGAAGCTCTTCTACTCCATAACAACTCTTTCACGGGAATTCTTCCGTCATCG TTGGGCAGGCTTAAAAATCTGCAAGTTTTATATATAGACAATAATAAAATAAGTGGATCA ATCCCATTAGCCATAGGGAATCTTACAGAACTAAATTATTTCCGCCTTGATGTGAATGCC TTCACTGGTAGGATACCAAGTGCACTTGGAAACCTGACAAACCTAGTGGAACTAGGTCTT TCAAGCAATAATTTCACAGGTTCTATTCCTGTTGAAATATTTAAGATTCACACGTTGTCG TTAACTTTGGATATATCCAATAACAACTTGGAAGGATCAATACCACAAGAAATCGGGGGC TTGAAAAATCTTGTTCAATTCTATGCAGATTCCAACAAGTTATCAGGTGAAATCCCTAGC ACCCTTGGTGAATGCCAACTTCTCCAGAATATATCTCTCCAAAATAATTTCTTGAGCGGT AGCGTTCCATCACTCCTGAGTCAATTGAAAGGTCTACAAATTCTTGATCTTTCCAATAAC AACTTGTCAGGTCAAATACCCACATTCCTGTCAAACCTTACCATGCTCAGTTATCTCAAC CTTTCATTCAATGACTTTAGTGGTGAAGTACCAACTTTTGGTGTCTTTTCGAATCCTTCC GCAATTTCCATCCATGGAAATGGCAAACTTTGTGGTGGCATACCAGATCTACATTTGCCT AGATGCTCTTCACAGTCACCACACAGAAGGCAAAAACTTCTGGTAATTCCTATTGTTGTT TCTCTTGCTGTAACATTACTACTCCTCTTATTGCTCTACAAGCTTCTCTATTGGCGTAAG AATATAAAAACAAACATCCCATCTACCACATCCATGGAAGGCCATCCCTTGATCTCTCAC TCCCAGCTGGTAAGAGCAACAGATAATTTCTCAGCAACCAATTTGTTGGGATCAGGATCA TTTGGGTCTGTGTACAAAGGAGAAATAAATAATCAAGCTGGTGAAAGTAAAGATATAGCT GTGAAAGTGCTAAAACTCCAAACCCCTGGCGCACTCAAAAGTTTCATAGCCGAATGCGAA GCACTGCGAAACCTATGGCATCGGAACCTTGTCAAAATAATTACAGCTTGCTCAAGCATT GATAACAGTGGCAATGACTTCAAAGCAATTGTGTTCGAGTTCATGCCTAATGGCAGTTTA GATGGTTGGCTACATCCTGACAATAATGATCATACAGAGCAAAGGTACTTGAATATCCTG GAAAGAGTGAGCATACTCCTTGATGTGGCTTATGCATTGGATTATCTTCATTGCCATGGC CCTGCCCCTGTGATACATTGTGATATTAAGTCAAGTAATGTTCTCTTGGATTCTGACATG GTGGCTCGTGTTGGAGACTTTGGACTTGCAAGGATTCTTGATGAGCAAAACTCAGTTTTC CAACCCTCGACGAACTCAATACTATTTAGAGGGACGATTGGCTATGCTGCCCCAGGTTAG