Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0568700-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:21201731:21207327:1 gene:Os11g0568700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0568700-01);START-like domain domain containing protein. (Os11t0568700-02)
Sequence

ATGGTGGCGGCCATGGAGAAGCGGAGGGAAATCCGGGAGCTTCGCGACCGGATGGACCGG
ACGCTGGCGCTGCCCGACCTCGCCGACGAGGAGTTGCTGAGATCTCTCGTGAAGAGGCAG
ATTCTTGCGTCGTCGCTGTCCGCCGGCAACGATGAAGGCAATATTGACCTGATTGCTGAA
GCAAGGTCTAAAGAGATCTCGAATTTTCTTGAAATGCTAAATACTTCGGGGAATGAACGA
TCTTCGAAGATTCATGAGGCATCACATAAAGAATGGAAGGTGAAGCAAGACACGGACCAA
TTACGAGTTATGTATCGCGAGGGACCAGAGGGGACCCCATTTCACACCCTCCTTGCTGAA
GGCTTTGCTGATGGACCAATTGATGTTTGTACATGTGTTTCATGGGAATCGTCTCTGTAC
AAAAAATGGTTTCCACAATACAACCTTCCAACTTTTAAAGTTGCTCAGTCAGGCTGTTTG
AAGAAGGTTCGGGTTGGTGAAGAAATTTCTTTGGTCAGGGTGAAGGTTCCATGGCCAGTT
TCGGAGAGAGAAGCTCTTCTTCACTACTTCGAATTAGAGTATCTTAAAGAAGATCTTGTC
ATTGTAATCATGAAAACTATATCGGATACGGACAATATAAATATAGAGACACATGGATTT
AGTAGGGATGGAATTCCTGAAGCTGGTGACACCGTTCGGATAGATGTAGTCGGAGGCTTT
GTTTTGCAAAGGATTACAAAGGAGAAAAGCTTTTTCAGGGCAATAGCTAATATGGATATT
AAGCTAGACTTCGTTCCACCATGGCTTATCAACTTCATATCAAGGCAACTAATTGGCAGC
GGCCATAAACTCTATCAGAAGGCAGTCAGTACTGTGGCAAATTGTGATGAGGATTACAAG
AAAGCTTTGAGAGAACCACTCTATGTTAGAATCCGTGAGCACCGGGGTTCTACTGACATC
GCAAATGTCACTCCAGTGGAGGAAAGGGCAACAGAAGCCCTCCCTGACAATCCCACTTTG
CAGAATGTTCTCGCGGTTACTAATATCACCTCGAACAGTGAGATAGTCGAAGAGGAGAGT
GAACAGAAGGCATTATTCAAGCTGGATCATCATGCAATAGGCCCTTCAAACCCTCCGGCT
GAGCAAGAGCAACATGTTGAAAATAAGCCTTACATTAGTCCTGAGGTAGAGCAGGCTTTG
AACATATTGGACAAAGCTATTGCAATTATCCGAGGCAACAATGCTGGAAGTGCCAGTGTG
GTCCAAAAGTTTATCGGTTACGATGTAACTTTAGATGGCAGTACCACTGACTCTAGAAAT
TCACACAATATTCCAAATGAACATCCTGCTACATTGCCACCTCGAGATTCAAGAGAGACC
CAGCACACTTATTCATTGTCCAATGAGAATGTTAATCATAGGGAGAAAGATGCTCTTGAC
AGTGACTCGCAACGATACACAACAGCTTCTACCGTAACAAAAACTATGTCCATGACAAGG
AGGAGCACGACACGGGTGCACGGAGAAGAGAGCCTTGACACCAATGGCTTACATCAGAAC
GGTTTCCACAAGGACAAAGAGTCTAAACGAACAAGGAAAAGGAAGACAAACAGTTGGCTC
TGCTGCTTAACCCCTAGCACCACAGGATGA

Peptide Sequence

PEP ID

Os11t0568700-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:21201731:21207327:1 gene:Os11g0568700 transcript:Os11t0568700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0568700-01);START-like domain domain containing protein. (Os11t0568700-02)
Sequence

MVAAMEKRREIRELRDRMDRTLALPDLADEELLRSLVKRQILASSLSAGNDEGNIDLIAE
ARSKEISNFLEMLNTSGNERSSKIHEASHKEWKVKQDTDQLRVMYREGPEGTPFHTLLAE
GFADGPIDVCTCVSWESSLYKKWFPQYNLPTFKVAQSGCLKKVRVGEEISLVRVKVPWPV
SEREALLHYFELEYLKEDLVIVIMKTISDTDNINIETHGFSRDGIPEAGDTVRIDVVGGF
VLQRITKEKSFFRAIANMDIKLDFVPPWLINFISRQLIGSGHKLYQKAVSTVANCDEDYK
KALREPLYVRIREHRGSTDIANVTPVEERATEALPDNPTLQNVLAVTNITSNSEIVEEES
EQKALFKLDHHAIGPSNPPAEQEQHVENKPYISPEVEQALNILDKAIAIIRGNNAGSASV
VQKFIGYDVTLDGSTTDSRNSHNIPNEHPATLPPRDSRETQHTYSLSNENVNHREKDALD
SDSQRYTTASTVTKTMSMTRRSTTRVHGEESLDTNGLHQNGFHKDKESKRTRKRKTNSWL
CCLTPSTTG

Transcript Sequence

Transcript ID

Os11t0568700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:21201731:21207327:1 gene:Os11g0568700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0568700-01);START-like domain domain containing protein. (Os11t0568700-02)
Sequence

CTTCTCCTCCTCCTCCTTCCTCGCCGATCCTCGCCGCCGCCGCCGCGCATCGCCGGAGCA
ATCTCCATTGACAAGAGCGGTATAGGTTGGTGAGGAGGGGAGCTAGAGCTTGATGGTGGC
GGCCATGGAGAAGCGGAGGGAAATCCGGGAGCTTCGCGACCGGATGGACCGGACGCTGGC
GCTGCCCGACCTCGCCGACGAGGAGTTGCTGAGATCTCTCGTGAAGAGGCAGATTCTTGC
GTCGTCGCTGTCCGCCGGCAACGATGAAGGCAATATTGACCTGATTGCTGAAGCAAGGTC
TAAAGAGATCTCGAATTTTCTTGAAATGCTAAATACTTCGGGGAATGAACGATCTTCGAA
GATTCATGAGGCATCACATAAAGAATGGAAGGTGAAGCAAGACACGGACCAATTACGAGT
TATGTATCGCGAGGGACCAGAGGGGACCCCATTTCACACCCTCCTTGCTGAAGGCTTTGC
TGATGGACCAATTGATGTTTGTACATGTGTTTCATGGGAATCGTCTCTGTACAAAAAATG
GTTTCCACAATACAACCTTCCAACTTTTAAAGTTGCTCAGTCAGGCTGTTTGAAGAAGGT
TCGGGTTGGTGAAGAAATTTCTTTGGTCAGGGTGAAGGTTCCATGGCCAGTTTCGGAGAG
AGAAGCTCTTCTTCACTACTTCGAATTAGAGTATCTTAAAGAAGATCTTGTCATTGTAAT
CATGAAAACTATATCGGATACGGACAATATAAATATAGAGACACATGGATTTAGTAGGGA
TGGAATTCCTGAAGCTGGTGACACCGTTCGGATAGATGTAGTCGGAGGCTTTGTTTTGCA
AAGGATTACAAAGGAGAAAAGCTTTTTCAGGGCAATAGCTAATATGGATATTAAGCTAGA
CTTCGTTCCACCATGGCTTATCAACTTCATATCAAGGCAACTAATTGGCAGCGGCCATAA
ACTCTATCAGAAGGCAGTCAGTACTGTGGCAAATTGTGATGAGGATTACAAGAAAGCTTT
GAGAGAACCACTCTATGTTAGAATCCGTGAGCACCGGGGTTCTACTGACATCGCAAATGT
CACTCCAGTGGAGGAAAGGGCAACAGAAGCCCTCCCTGACAATCCCACTTTGCAGAATGT
TCTCGCGGTTACTAATATCACCTCGAACAGTGAGATAGTCGAAGAGGAGAGTGAACAGAA
GGCATTATTCAAGCTGGATCATCATGCAATAGGCCCTTCAAACCCTCCGGCTGAGCAAGA
GCAACATGTTGAAAATAAGCCTTACATTAGTCCTGAGGTAGAGCAGGCTTTGAACATATT
GGACAAAGCTATTGCAATTATCCGAGGCAACAATGCTGGAAGTGCCAGTGTGGTCCAAAA
GTTTATCGGTTACGATGTAACTTTAGATGGCAGTACCACTGACTCTAGAAATTCACACAA
TATTCCAAATGAACATCCTGCTACATTGCCACCTCGAGATTCAAGAGAGACCCAGCACAC
TTATTCATTGTCCAATGAGAATGTTAATCATAGGGAGAAAGATGCTCTTGACAGTGACTC
GCAACGATACACAACAGCTTCTACCGTAACAAAAACTATGTCCATGACAAGGAGGAGCAC
GACACGGGTGCACGGAGAAGAGAGCCTTGACACCAATGGCTTACATCAGAACGGTTTCCA
CAAGGACAAAGAGTCTAAACGAACAAGGAAAAGGAAGACAAACAGTTGGCTCTGCTGCTT
AACCCCTAGCACCACAGGATGATGAGAGGCCCATTCAGTTTGCTGAGTTAACCATTGAAT
TTTGAATGCACTACACAAAGCAGTCTTAATTTATAAAAAAATTGATAGTTTGCGAAATAC
ACGGGGAATCGAACGACAACCCAGGTGGCACCTTGTGATAGTTACCAAGAGCAGATCCAG
TCCTTGATAAGTTGTATAGTAGCTGTTGTATTGTTGTAACATAATTCCCGATGATGTTTC
TCGATAATGCAGATGCTGGGAATTGTACTTCATCATCTAAAATGTGCAATGTTGTTTTCA
TGAGAATTCTGTTATGGCCTTATGGGGGGTTCTAGGTAGGTACAATCCTCATGACCAAAC
ACATGATCAGCTTGTTGGTGCTGATATCAGTGAATGAAGGAATTGCTATCAGATTTTAAT
GACATGAACCTCACCAGATTTTCGAAGTTTCAGTCATCCTTCAGAGATTCTTCTGAGCAA
CAGCAACAGTTTGAGTATGGTCCCAGACCAAGTTGTTGAATTTCTTATGTCGGCAGATCA
GTTTGTCTGCTATTTGTTGAATTTGATGTCGGCAGGTCAGCTTGTCTGCTATAGAGTTCA
GTTTTGTTTGGTATGGATTTAGCGTCTTGTAGATGCAAGATTGAACATAGTGATAATTTG
ATGTTTTACCTTTTCGATTGATGTTTTGACTAGAGTATTTGAGGTGACTTTGACCATTAA
CTTTTCATCTCTAAATTAAGATATAGTAATAAAGATACTATAAAGTATTTCTGATACC