Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0568500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:21185518:21187738:1 gene:Os11g0568500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os11t0568500-01)
Sequence

ATGGCAAGCAAAGCAGGTGGTGACGGCAAAGAAGCCATCAATGAGCAAATAATTGCAAAC
ACTTATGGGAACATGCGGTCTGAAATGACTCAACTTTACACCAAGATTACAGAATTAGAG
ATGGAAGTCAGTGAACACTCTCTTGTGATTGGCGCAATCGAGCCACTGGATCACTCAAGG
CGCTGCTACAGAATGGTTGGTGGCGTCCTGGTTGAAAGGACCATCAGGGAAGTCTTGCCT
GCGGTGCATCGCAACAAGGAGGGCCTTGAAGAGGTAATCGCTCGCATGCATGAAGCACTG
GAGAAGAAAAAGAAGGAGATCACCGAGTTTGAGCTGAAGTACAAGATCAGGATCCGGAAG
GCGGACAGCAACGCTGATGAGGAAGAAGGCAGCAAGAAGGAAGGGTCTGCTCAGGGTGTT
CTTGTTGGTCCTGCTGGCCAGTGA

Peptide Sequence

PEP ID

Os11t0568500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:21185518:21187738:1 gene:Os11g0568500 transcript:Os11t0568500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os11t0568500-01)
Sequence

MASKAGGDGKEAINEQIIANTYGNMRSEMTQLYTKITELEMEVSEHSLVIGAIEPLDHSR
RCYRMVGGVLVERTIREVLPAVHRNKEGLEEVIARMHEALEKKKKEITEFELKYKIRIRK
ADSNADEEEGSKKEGSAQGVLVGPAGQ

Transcript Sequence

Transcript ID

Os11t0568500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:21185518:21187738:1 gene:Os11g0568500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os11t0568500-01)
Sequence

ACACCTAGGTTTTCACCTCGCCGTCCCACTCCCACCCACGCCGCCGCCACCGCCGCCGCC
GCCGCCGCTTCACTCGCCGGAGCGCCATCTCTAGCCGCCGCCGCCGTCCTCCCCCTGAGA
AAGCGTCGATTCCGTCCGGGGGTGGGCAGCGGTGGGACTCGTATCCGGACGGCCGCAGAT
TCGTTGAGCGACCCGCGCTGCTGGTTTTAGTCTTGTTGGCATCCTTCTGTTAAGGAAAAT
GGCAAGCAAAGCAGGTGGTGACGGCAAAGAAGCCATCAATGAGCAAATAATTGCAAACAC
TTATGGGAACATGCGGTCTGAAATGACTCAACTTTACACCAAGATTACAGAATTAGAGAT
GGAAGTCAGTGAACACTCTCTTGTGATTGGCGCAATCGAGCCACTGGATCACTCAAGGCG
CTGCTACAGAATGGTTGGTGGCGTCCTGGTTGAAAGGACCATCAGGGAAGTCTTGCCTGC
GGTGCATCGCAACAAGGAGGGCCTTGAAGAGGTAATCGCTCGCATGCATGAAGCACTGGA
GAAGAAAAAGAAGGAGATCACCGAGTTTGAGCTGAAGTACAAGATCAGGATCCGGAAGGC
GGACAGCAACGCTGATGAGGAAGAAGGCAGCAAGAAGGAAGGGTCTGCTCAGGGTGTTCT
TGTTGGTCCTGCTGGCCAGTGAAGCAAAATGTCAAGCTTGCATACTGGTTTTTCCTAGAG
ATTATGAAAGTTAGGTTGCTCTTTGCTAGATGTCAACTGATTTCGGTCTCTCTTTCTATC
TGTGTGTGAAGTATACTACTATTCTTCTGTGGAACCGTGGAATCCGTTCCATGTACAATT
GAATGCTATCTGGCTATGCTAGTTGATAACTTCGGTCATAACTGCAGGTTTTGTGCAGGT
ATTCTAGGTGAGAACTTTGGT