Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0565000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:21040870:21043941:1 gene:Os11g0565000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0565000-01)
Sequence	ATGAGTACGGCCATTATCATCGTCTCCACCACCACCTCCTCCTCCTTCTTCTTCTTCCTC CTCCTCATGATCACTACCGGCGGCGGCTGCAAACCGCGGGAGAGAGACGCTCTGCTGGCG TTCAAGGAAGGCATCGTCAAGGATCCTGCAGGCCTCCTCTCCTCCTGGCAAAGAGGAGGC CACTATGATGATGATGATGATCAGCTGCTGGAAGAGGATTGTTGCCAATGGAGAGGCGTC CGGTGCAGCAACCTCACCGGCCATGTCGTCAAGCTCAACCTCCGAAACGATTACGCCGAC GTTGGAACAGGTCTGGTTGGCGAGATAGGCCATTCTCTGATCTCGCTGGAGCATCTCAGG TACCTTGATCTCAGCATGAACAACCTGGCAGGTCCAACTGGACATGTCCCTGAGTTCTTG GGCTCTTTCAGAAGCTTGAGATATCTGAATCTATCTGGTATAGTGTTCTCCGGCATGGTG CCACCTCAGCTCGGTAAGCTTTCAAATCTGAAATTTCTCGACTTCTCCGGGATGTTGCCC TCCAGCATGGCTCCATTTCTGTACATTAGTGATGCTTCATGGTTAGCACACTTGTCCAAT TTGCAATATCTGAACCTTAACGGGGTAAACCTTAGCACAGTACTCGATTGGCCTCATGTT CTGAATATGATCCCTTCTCTGAAGTTCCTTAGCCTTTCTTCTTGCTCACTTCAGAGTGCA AATCAGTATCCCACACAGATTAACCTCAGGCAACTTGAGATACTTGATCTTTCCAACAAT TATGAACTTAGTGACCAAGCTGAATCTAGTTGGATTTGGAGCTTGACATCCCTCAAGTAT CTCAATCTTAGTTCGACTAGTTTGTATGGTGAGATCCCACAAGCACTAGGAAACATGCTG TCCCTCCAAGTTCTTGATTTCTCGTACAACATGAGTGTTTCGAAGAAAGGTAACATGTGC ATCATGAAGGCAAACTTGAAGAATCTGTGCAATTTGGAAGTTCTTGACCTTGATTATAGA CTGGCATATGGAGAGATTTCAGAAATATTTGAGAGTTTACCACAGTGTTCACCCAACAAA CTGAAGGAACTTCATTTGGCTAATAACAATTTGACTGGGAATTTACCAAAATTGGTAGGG AGGCTAACAAGCTTAGTCACTCTTGACCTCTTTAATAATAACATCACTGGACAAGTGCCT TCTGAGATAGGTATGCTCACAAATTTGACAAACTTGTACCTCCATTACAATTGCCTGGAT GGTGTCATCACAGAGGAGCACTTTGCCAATCTAACGAGCTTGAAGTCGATATATTTGTGT TATAATTACTTGGAGATTGTAGTGGATCCTGAATGGTTACCTCCCTTCAGATTAGAGAAG GCATACTTTGCATCTACTTCGATGGGTCCCTCATTTCCCTCATGGCTTCAATCACAAGTC GATATTCTTGAACTTGCTATGAGCGATGCTGGAATAAATGATACATTTCCAGACTGGTTC TCTACAACATTTTCGAAGGCCACGTTTTTGGAGATGTCGCAGAATCAAATTGCTGGAGGC TTGCCAACAAATATGGAAAACATGTCATTGGAAAAATTATATTTGGACTGCAACCACATA GCTGATCGAATTCCTCGGATGCCGAGAAACCTTATGCTACTAGATATATCATATAACCTT ATCAGTGGTGATGTTCCACAGTCTATTTGTGAATTGCAGAAATTAAATGGCCTTGACTTG TCCAATAATCTACTCGAGGGCGAGTTCCCTCAATGTTCTCTAATGAGCAGGGTATCATTT TTTCGTGCAAGTAACAATAGTTTTTCTGGCAACTTCCCATCTTTTTTACAGGGTTGGACA AAGTTAAGTTTCCTTGATCTGTCATGGAATAAATTCTCTGGGACTTTGCCTACATGGATT GGAAACTTTAACAAGCTAGAATTTCTGCAGCTTAAGCACAATATGTTCTCTGGAAGTATT CCTGACAGCATCACCAACCTTGGAAAGCTTTCTCATTTGGATCTAGCCAGCAATGGTTTA TCAGGTCCCCTGCCTCAGCATTTGTCAAATTTAACAGGAATGATGATAAACCATGATACC ACAAAATATGAAGAGAGACTATCTGGATGTGACTACAAATCTTTTGTGAACATGAAGGGA CAGGAACTACAATACAACCAAGAAAAAGTAACAGTTGTGACAATTGACTTGTCTTCAAAT TTTTTGACTGGTGTAATTCCTGAAGGCATAGTTTCTCTTGACGGAATTATAAATTTGAAT TTGTCATGGAACAATTTGAATGGAAAAATTCCATACATGATTGGGGCCATCAAGTCATTG GAATCACTCGACCTCTCGAAGAACAATTTCTATGGTGAAATCCCACAAAGCCTATCTGAT TTAACATATTTAAGTTATTTGAACCTATCTTATAACAATCTTACTGGAAGAGTACCATCA GGGACACAACTTTGTAGCCTCTATGACCAAAACCATCATCTGTATGACGGCAATGATGGT CTTTGTGGGCCACCTCTCCAAAAAAGTTGTTATAAGTATGATGCCTCAAAGCAAGGTTAC CAGATCAGAAGCAAACAAGGTTTTCACATAGGGTCATTTTCCATTGGAGTTACAGTGGGA TTTATGGCAGGCCTATGGGTGGTTTTCTATATTCTTTTGTTCAAGAAATCCTGGAGGATT GCTTACTTTTGCTTCTTGGACAATATGTATGATGAGGTTTATGTGAAGGTGATTGTTGTC TGGGCAAAGTTGACAGGAAGAACAGATGAAAGATTGCGAATGTCGCAGGTCGCATGGTCA TCCATCGACTCTGACGAATACTATGAATAG

Peptide Sequence

PEP ID	Os11t0565000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:21040870:21043941:1 gene:Os11g0565000 transcript:Os11t0565000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0565000-01)
Sequence	MSTAIIIVSTTTSSSFFFFLLLMITTGGGCKPRERDALLAFKEGIVKDPAGLLSSWQRGG HYDDDDDQLLEEDCCQWRGVRCSNLTGHVVKLNLRNDYADVGTGLVGEIGHSLISLEHLR YLDLSMNNLAGPTGHVPEFLGSFRSLRYLNLSGIVFSGMVPPQLGKLSNLKFLDFSGMLP SSMAPFLYISDASWLAHLSNLQYLNLNGVNLSTVLDWPHVLNMIPSLKFLSLSSCSLQSA NQYPTQINLRQLEILDLSNNYELSDQAESSWIWSLTSLKYLNLSSTSLYGEIPQALGNML SLQVLDFSYNMSVSKKGNMCIMKANLKNLCNLEVLDLDYRLAYGEISEIFESLPQCSPNK LKELHLANNNLTGNLPKLVGRLTSLVTLDLFNNNITGQVPSEIGMLTNLTNLYLHYNCLD GVITEEHFANLTSLKSIYLCYNYLEIVVDPEWLPPFRLEKAYFASTSMGPSFPSWLQSQV DILELAMSDAGINDTFPDWFSTTFSKATFLEMSQNQIAGGLPTNMENMSLEKLYLDCNHI ADRIPRMPRNLMLLDISYNLISGDVPQSICELQKLNGLDLSNNLLEGEFPQCSLMSRVSF FRASNNSFSGNFPSFLQGWTKLSFLDLSWNKFSGTLPTWIGNFNKLEFLQLKHNMFSGSI PDSITNLGKLSHLDLASNGLSGPLPQHLSNLTGMMINHDTTKYEERLSGCDYKSFVNMKG QELQYNQEKVTVVTIDLSSNFLTGVIPEGIVSLDGIINLNLSWNNLNGKIPYMIGAIKSL ESLDLSKNNFYGEIPQSLSDLTYLSYLNLSYNNLTGRVPSGTQLCSLYDQNHHLYDGNDG LCGPPLQKSCYKYDASKQGYQIRSKQGFHIGSFSIGVTVGFMAGLWVVFYILLFKKSWRI AYFCFLDNMYDEVYVKVIVVWAKLTGRTDERLRMSQVAWSSIDSDEYYE

Transcript Sequence

Transcript ID	Os11t0565000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:21040870:21043941:1 gene:Os11g0565000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0565000-01)
Sequence	AAGCTAACAGTAGTGTGAAGTAACATCACAGTATCGCACAGACACAGCAGCTAATCACTT GGCCGGCCGACCATGAGTACGGCCATTATCATCGTCTCCACCACCACCTCCTCCTCCTTC TTCTTCTTCCTCCTCCTCATGATCACTACCGGCGGCGGCTGCAAACCGCGGGAGAGAGAC GCTCTGCTGGCGTTCAAGGAAGGCATCGTCAAGGATCCTGCAGGCCTCCTCTCCTCCTGG CAAAGAGGAGGCCACTATGATGATGATGATGATCAGCTGCTGGAAGAGGATTGTTGCCAA TGGAGAGGCGTCCGGTGCAGCAACCTCACCGGCCATGTCGTCAAGCTCAACCTCCGAAAC GATTACGCCGACGTTGGAACAGGTCTGGTTGGCGAGATAGGCCATTCTCTGATCTCGCTG GAGCATCTCAGGTACCTTGATCTCAGCATGAACAACCTGGCAGGTCCAACTGGACATGTC CCTGAGTTCTTGGGCTCTTTCAGAAGCTTGAGATATCTGAATCTATCTGGTATAGTGTTC TCCGGCATGGTGCCACCTCAGCTCGGTAAGCTTTCAAATCTGAAATTTCTCGACTTCTCC GGGATGTTGCCCTCCAGCATGGCTCCATTTCTGTACATTAGTGATGCTTCATGGTTAGCA CACTTGTCCAATTTGCAATATCTGAACCTTAACGGGGTAAACCTTAGCACAGTACTCGAT TGGCCTCATGTTCTGAATATGATCCCTTCTCTGAAGTTCCTTAGCCTTTCTTCTTGCTCA CTTCAGAGTGCAAATCAGTATCCCACACAGATTAACCTCAGGCAACTTGAGATACTTGAT CTTTCCAACAATTATGAACTTAGTGACCAAGCTGAATCTAGTTGGATTTGGAGCTTGACA TCCCTCAAGTATCTCAATCTTAGTTCGACTAGTTTGTATGGTGAGATCCCACAAGCACTA GGAAACATGCTGTCCCTCCAAGTTCTTGATTTCTCGTACAACATGAGTGTTTCGAAGAAA GGTAACATGTGCATCATGAAGGCAAACTTGAAGAATCTGTGCAATTTGGAAGTTCTTGAC CTTGATTATAGACTGGCATATGGAGAGATTTCAGAAATATTTGAGAGTTTACCACAGTGT TCACCCAACAAACTGAAGGAACTTCATTTGGCTAATAACAATTTGACTGGGAATTTACCA AAATTGGTAGGGAGGCTAACAAGCTTAGTCACTCTTGACCTCTTTAATAATAACATCACT GGACAAGTGCCTTCTGAGATAGGTATGCTCACAAATTTGACAAACTTGTACCTCCATTAC AATTGCCTGGATGGTGTCATCACAGAGGAGCACTTTGCCAATCTAACGAGCTTGAAGTCG ATATATTTGTGTTATAATTACTTGGAGATTGTAGTGGATCCTGAATGGTTACCTCCCTTC AGATTAGAGAAGGCATACTTTGCATCTACTTCGATGGGTCCCTCATTTCCCTCATGGCTT CAATCACAAGTCGATATTCTTGAACTTGCTATGAGCGATGCTGGAATAAATGATACATTT CCAGACTGGTTCTCTACAACATTTTCGAAGGCCACGTTTTTGGAGATGTCGCAGAATCAA ATTGCTGGAGGCTTGCCAACAAATATGGAAAACATGTCATTGGAAAAATTATATTTGGAC TGCAACCACATAGCTGATCGAATTCCTCGGATGCCGAGAAACCTTATGCTACTAGATATA TCATATAACCTTATCAGTGGTGATGTTCCACAGTCTATTTGTGAATTGCAGAAATTAAAT GGCCTTGACTTGTCCAATAATCTACTCGAGGGCGAGTTCCCTCAATGTTCTCTAATGAGC AGGGTATCATTTTTTCGTGCAAGTAACAATAGTTTTTCTGGCAACTTCCCATCTTTTTTA CAGGGTTGGACAAAGTTAAGTTTCCTTGATCTGTCATGGAATAAATTCTCTGGGACTTTG CCTACATGGATTGGAAACTTTAACAAGCTAGAATTTCTGCAGCTTAAGCACAATATGTTC TCTGGAAGTATTCCTGACAGCATCACCAACCTTGGAAAGCTTTCTCATTTGGATCTAGCC AGCAATGGTTTATCAGGTCCCCTGCCTCAGCATTTGTCAAATTTAACAGGAATGATGATA AACCATGATACCACAAAATATGAAGAGAGACTATCTGGATGTGACTACAAATCTTTTGTG AACATGAAGGGACAGGAACTACAATACAACCAAGAAAAAGTAACAGTTGTGACAATTGAC TTGTCTTCAAATTTTTTGACTGGTGTAATTCCTGAAGGCATAGTTTCTCTTGACGGAATT ATAAATTTGAATTTGTCATGGAACAATTTGAATGGAAAAATTCCATACATGATTGGGGCC ATCAAGTCATTGGAATCACTCGACCTCTCGAAGAACAATTTCTATGGTGAAATCCCACAA AGCCTATCTGATTTAACATATTTAAGTTATTTGAACCTATCTTATAACAATCTTACTGGA AGAGTACCATCAGGGACACAACTTTGTAGCCTCTATGACCAAAACCATCATCTGTATGAC GGCAATGATGGTCTTTGTGGGCCACCTCTCCAAAAAAGTTGTTATAAGTATGATGCCTCA AAGCAAGGTTACCAGATCAGAAGCAAACAAGGTTTTCACATAGGGTCATTTTCCATTGGA GTTACAGTGGGATTTATGGCAGGCCTATGGGTGGTTTTCTATATTCTTTTGTTCAAGAAA TCCTGGAGGATTGCTTACTTTTGCTTCTTGGACAATATGTATGATGAGGTTTATGTGAAG GTGATTGTTGTCTGGGCAAAGTTGACAGGAAGAACAGATGAAAGATTGCGAATGTCGCAG GTCGCATGGTCATCCATCGACTCTGACGAATACTATGAATAGACGAAGACAAAGAAGCTG GAGCAGGTCTACAACACTCTTAGTTGGGTTGTATATTTTGTCATAGATGGAACTTATTAG AACAAGTATCCTAAATGCATATGATGCATTGATCCACATTGATGTATATATTATTGTATC TGTTTGTACTAG