Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0559200-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:20802978:20806262:1 gene:Os11g0559200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 21 description:Protein kinase, core domain containing protein. (Os11t0559200-00)
Sequence	ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTTCCCT TCGAGCAGTGACGACGACGGTGGTGGTGATGCTGCCGGCGACGAACTCGCGCTGCTCTCT TTCAAGTCATCCCTGCTATACCAGGGGGGCCAGTCGCTGGCATCTTGGAACACGTCCGGC CATGGCCAGCACTGCACATGGGTGGGTGTCGTGTGCGGCCGCCGGCACCCACACAGGGTG GTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAAC CTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAG GAGCTCAGCCGTCTCATCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGT GAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAAT ACACTGTCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACAGGTCTCACTGATCTTGCA CTGGCTGAAAATACGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTA TCTTTCCTTAGCTTAGCCTTTAACAATTTAAGTGGAGCGATCCCAGATCCTATTTGGAAC ATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACA AATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCAT GGTCGTATCCCGGCATCGATAGGTAATGCTTCCAACATCTCAATATTTACCATTGGTTTA AACTCTTTTAGCGGTGTTGTTCCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTA GAGCTTCCAGAAACTCTTTTGGAAGCTAAAGAAACAAATGATTGGAAATTCATGACGGCA TTGACAAATTGCTCCAATCTTCAAGAAGTGGAACTGGGAGGTTGTAAATTTGGTGGAGTC CTCCCTGATTCTGTTTCCAATCTTTCCTCTTCGCTTGTATCTCTCTCCATTAGAGATAAC AAAATTTCAGGGAGCTTACCTAGAGATATCGGTAATCTCGTTAATTTACAATATCTTTCT CTCGCTAACAACTCCTTGACAGGATCCCTTCCCTCTTCCTTCAGCAAGCTTAAAAATTTA CGTCGTCTCACTGTAGATAACAACAAGTTAATTGGTTCTCTCCCATTCACCATCGGTAAT CTTACACAACTAACTAATATGGAGGTCCAATTTAATGCCTTCGGTGGTACAATACCAAGC ACACTTGGAAACCTGACCAAGCTGTTTCAAATAAATCTTGGCCACAATAACTTTATAGGG CAAATTCCCATTGAAATATTTAGCATTCCCGCACTCTCTGAAATTTTGGATGTGTCCCAT CATAACTTGGAGGGATCAATACCAAAAGAAATAGGGAAACTTAAAAATATTGTCGAATTC CATGCTGATTCGAACAAATTATCGGGTGAGATCCCTAGCACCATTGGTGAATGCCAACTT CTGCAGCATCTTTTCCTGCAAAACAATTTCTTAAATGGTAGCATCCCAATAGCTCTGACT CAGTTGAAAGGTCTGGACACACTTGATCTCTCAGGTAACAATTTGTCAGGTCAGATACCT ATGTCCTTAGGGGACATGCCTCTGCTCCACTCGCTGAACCTTTCGTTCAACAGCTTCCAC GGTGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTACATCCAAGGCAAT GCCCATATTTGCGGTGGCATACCTGAACTACATCTTCCGACGTGTTCCTTAAAATCAAGA AAGAAAAAGAAACATCAAATTCTGCTGTTAGTGGTTGTTATCTGTCTCGTTTCGACACTT GCCGTCTTTTCGTTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTC CCTGCAACGACATCCATGCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCA ACGGATGGTTTTTCGTCCAGCCATTTGTTGGGTTCTGGATCTTTTGGCTCTGTTTACAAA GGAGAATTTGATAGTCAAGATGGTGAAATCACAAGTCTTGTTGCCGTGAAGGTACTAAAG CTGGAAACTCCAAAGGCACTCAAGAGTTTCACGTCCGAATGCGAAACACTGCGAAATACT CGACACCGGAATCTTGTCAAGATAGTTACGATTTGCTCGAGCATCGATAACAGAGGGAAT GATTTCAAAGCAATTGTGTATGACTTCATGCCCAATGGCAGTCTGGAAGATTGGCTACAC CCTGAAACAAATGATCAAGCAGAGCAAAGGCACTTGACTCTGCATCAGAGAGTGACCATA CTACTTGATGTTGCATGTGCATTGGACCATCTTCACTTCCATGGCCCTGAACCTATTGTA CACTGTGATATTAAATCAAGCAATGTGTTGTTAGATGCTGATATGGTAGCCCATGTTGGA GACTTTGGACTTGCAAGAATACTTATTGAGGGAAGCTCATTGATGCAACAGTCAACAAGT TCGATGGGAATCAGGGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACACT GCCTCGACACATGGAGATATTTACAGTTATGGAATTCTAGTGTTGGAAACAGTAACCGGG ATGCGGCCGGCAGATAGTACATTCAGAACTGGATTGAGCCTCCGTCAGTACGTTGAACCG GGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTTGGTTTGGATTCCGAGAAA TGGCTTCAGGCTCGAGATGTTTCGCCATGCAGCAGTATTACTGAATGCCTTGTTTCACTG CTTAGACTTGGGCTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAACGCAAGCCGGAGAT GTCATCAATGAACTGCGTGCCATCAAAGAGTCTCTCTCGATGTCATCCGACATGTGA

Peptide Sequence

PEP ID	Os11t0559200-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:20802978:20806262:1 gene:Os11g0559200 transcript:Os11t0559200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 21 description:Protein kinase, core domain containing protein. (Os11t0559200-00)
Sequence	MISLPLLLFVLFFSALLLFPSSSDDDGGGDAAGDELALLSFKSSLLYQGGQSLASWNTSG HGQHCTWVGVVCGRRHPHRVVKLRLRSSNLAGIISPSLGNLSFLRTLQLSDNHLSGKIPQ ELSRLIRLQQLVLNFNSLSGEIPAALGNLTSLSVLELTNNTLSGAIPSSLGKLTGLTDLA LAENTLSGSIPSSFGQLRRLSFLSLAFNNLSGAIPDPIWNISSLTIFEVISNKLSGTLPT NAFSNLPSLQEVYMYYNQFHGRIPASIGNASNISIFTIGLNSFSGVVPPEIGRMRNLQRL ELPETLLEAKETNDWKFMTALTNCSNLQEVELGGCKFGGVLPDSVSNLSSSLVSLSIRDN KISGSLPRDIGNLVNLQYLSLANNSLTGSLPSSFSKLKNLRRLTVDNNKLIGSLPFTIGN LTQLTNMEVQFNAFGGTIPSTLGNLTKLFQINLGHNNFIGQIPIEIFSIPALSEILDVSH HNLEGSIPKEIGKLKNIVEFHADSNKLSGEIPSTIGECQLLQHLFLQNNFLNGSIPIALT QLKGLDTLDLSGNNLSGQIPMSLGDMPLLHSLNLSFNSFHGEVPTNGVFANASEIYIQGN AHICGGIPELHLPTCSLKSRKKKKHQILLLVVVICLVSTLAVFSLLYMLLTCHKRRKKEV PATTSMQGHPMITYKQLVKATDGFSSSHLLGSGSFGSVYKGEFDSQDGEITSLVAVKVLK LETPKALKSFTSECETLRNTRHRNLVKIVTICSSIDNRGNDFKAIVYDFMPNGSLEDWLH PETNDQAEQRHLTLHQRVTILLDVACALDHLHFHGPEPIVHCDIKSSNVLLDADMVAHVG DFGLARILIEGSSLMQQSTSSMGIRGTIGYAAPEYGVGNTASTHGDIYSYGILVLETVTG MRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKLGLDSEKWLQARDVSPCSSITECLVSL LRLGLSCSQELPSSRTQAGDVINELRAIKESLSMSSDM

Transcript Sequence

Transcript ID	Os11t0559200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20802978:20806262:1 gene:Os11g0559200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 21 description:Protein kinase, core domain containing protein. (Os11t0559200-00)
Sequence	ATGATATCACTCCCATTACTGCTCTTCGTCCTCTTCTTCTCTGCGCTGCTGCTCTTCCCT TCGAGCAGTGACGACGACGGTGGTGGTGATGCTGCCGGCGACGAACTCGCGCTGCTCTCT TTCAAGTCATCCCTGCTATACCAGGGGGGCCAGTCGCTGGCATCTTGGAACACGTCCGGC CATGGCCAGCACTGCACATGGGTGGGTGTCGTGTGCGGCCGCCGGCACCCACACAGGGTG GTGAAGCTGCGGCTGCGCTCCTCCAACCTGGCCGGGATCATCTCGCCGTCGCTGGGCAAC CTATCCTTCCTCAGGACGCTGCAACTCAGCGACAACCACCTGTCCGGCAAGATACCCCAG GAGCTCAGCCGTCTCATCAGGCTCCAGCAACTGGTACTGAATTTCAACAGCCTATCGGGT GAGATTCCAGCTGCTTTGGGCAATCTAACCAGTCTCTCGGTTCTTGAGCTGACTAACAAT ACACTGTCCGGAGCAATCCCTTCATCTCTGGGCAAACTCACAGGTCTCACTGATCTTGCA CTGGCTGAAAATACGCTGTCTGGTTCCATCCCATCATCTTTCGGCCAATTGCGCAGATTA TCTTTCCTTAGCTTAGCCTTTAACAATTTAAGTGGAGCGATCCCAGATCCTATTTGGAAC ATCTCCTCTCTCACCATATTCGAAGTCATATCCAACAAGCTAAGTGGTACACTGCCTACA AATGCATTCAGTAATCTTCCTAGTCTGCAGGAGGTATACATGTATTACAACCAGTTTCAT GGTCGTATCCCGGCATCGATAGGTAATGCTTCCAACATCTCAATATTTACCATTGGTTTA AACTCTTTTAGCGGTGTTGTTCCACCGGAGATTGGAAGGATGAGAAATCTTCAGAGACTA GAGCTTCCAGAAACTCTTTTGGAAGCTAAAGAAACAAATGATTGGAAATTCATGACGGCA TTGACAAATTGCTCCAATCTTCAAGAAGTGGAACTGGGAGGTTGTAAATTTGGTGGAGTC CTCCCTGATTCTGTTTCCAATCTTTCCTCTTCGCTTGTATCTCTCTCCATTAGAGATAAC AAAATTTCAGGGAGCTTACCTAGAGATATCGGTAATCTCGTTAATTTACAATATCTTTCT CTCGCTAACAACTCCTTGACAGGATCCCTTCCCTCTTCCTTCAGCAAGCTTAAAAATTTA CGTCGTCTCACTGTAGATAACAACAAGTTAATTGGTTCTCTCCCATTCACCATCGGTAAT CTTACACAACTAACTAATATGGAGGTCCAATTTAATGCCTTCGGTGGTACAATACCAAGC ACACTTGGAAACCTGACCAAGCTGTTTCAAATAAATCTTGGCCACAATAACTTTATAGGG CAAATTCCCATTGAAATATTTAGCATTCCCGCACTCTCTGAAATTTTGGATGTGTCCCAT CATAACTTGGAGGGATCAATACCAAAAGAAATAGGGAAACTTAAAAATATTGTCGAATTC CATGCTGATTCGAACAAATTATCGGGTGAGATCCCTAGCACCATTGGTGAATGCCAACTT CTGCAGCATCTTTTCCTGCAAAACAATTTCTTAAATGGTAGCATCCCAATAGCTCTGACT CAGTTGAAAGGTCTGGACACACTTGATCTCTCAGGTAACAATTTGTCAGGTCAGATACCT ATGTCCTTAGGGGACATGCCTCTGCTCCACTCGCTGAACCTTTCGTTCAACAGCTTCCAC GGTGAAGTGCCAACCAATGGTGTTTTTGCAAATGCTTCTGAAATTTACATCCAAGGCAAT GCCCATATTTGCGGTGGCATACCTGAACTACATCTTCCGACGTGTTCCTTAAAATCAAGA AAGAAAAAGAAACATCAAATTCTGCTGTTAGTGGTTGTTATCTGTCTCGTTTCGACACTT GCCGTCTTTTCGTTACTCTACATGCTTCTAACCTGTCATAAGAGAAGAAAGAAAGAAGTC CCTGCAACGACATCCATGCAAGGCCACCCAATGATCACTTACAAGCAGCTGGTAAAAGCA ACGGATGGTTTTTCGTCCAGCCATTTGTTGGGTTCTGGATCTTTTGGCTCTGTTTACAAA GGAGAATTTGATAGTCAAGATGGTGAAATCACAAGTCTTGTTGCCGTGAAGGTACTAAAG CTGGAAACTCCAAAGGCACTCAAGAGTTTCACGTCCGAATGCGAAACACTGCGAAATACT CGACACCGGAATCTTGTCAAGATAGTTACGATTTGCTCGAGCATCGATAACAGAGGGAAT GATTTCAAAGCAATTGTGTATGACTTCATGCCCAATGGCAGTCTGGAAGATTGGCTACAC CCTGAAACAAATGATCAAGCAGAGCAAAGGCACTTGACTCTGCATCAGAGAGTGACCATA CTACTTGATGTTGCATGTGCATTGGACCATCTTCACTTCCATGGCCCTGAACCTATTGTA CACTGTGATATTAAATCAAGCAATGTGTTGTTAGATGCTGATATGGTAGCCCATGTTGGA GACTTTGGACTTGCAAGAATACTTATTGAGGGAAGCTCATTGATGCAACAGTCAACAAGT TCGATGGGAATCAGGGGGACAATTGGTTACGCAGCACCAGAGTATGGTGTCGGGAACACT GCCTCGACACATGGAGATATTTACAGTTATGGAATTCTAGTGTTGGAAACAGTAACCGGG ATGCGGCCGGCAGATAGTACATTCAGAACTGGATTGAGCCTCCGTCAGTACGTTGAACCG GGTCTACATGGTAGACTGATGGATGTTGTTGACAGGAAGCTTGGTTTGGATTCCGAGAAA TGGCTTCAGGCTCGAGATGTTTCGCCATGCAGCAGTATTACTGAATGCCTTGTTTCACTG CTTAGACTTGGGCTGTCTTGCTCTCAGGAATTGCCATCGAGTAGAACGCAAGCCGGAGAT GTCATCAATGAACTGCGTGCCATCAAAGAGTCTCTCTCGATGTCATCCGACATGTGA