Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0558400-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:20748838:20751918:-1 gene:Os11g0558400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0558400-00)
Sequence	ATGTCCGCGCGCCGCCTCGCCGCGACGTTCTTGCTCGCCGCCGCCGCCACCCTGTCGCTG GCATGCGTGCCGGAGGAGCGCGACGCGCTGCTGGCGTTCAGGGACGGCGTCACCGGCGAC CCCGCGGGGCGCCTCGCCACGTGGCGGCGTCGGGGAGGAGGCGGCGACTGCTGCCGGTGG CGTGGCGTCCGGTGCAGCAACCGGACGAACGGGCACGTGGTGGCGCTCCGCCTCCGCAAC GACGCCGCCGCCGCCGCAGGCGGCGGCGGCGCGGAGCACGACGACCGAGGGTACTACGCC GGCGGCGCGGCGCTCGTCGGCGCGATCAGCCCGGCGCTCCTCTCCCTCCGCCGGCTGCGC CACCTCGACCTCAGCCGTAACTACCTCCAGGGCTCGCCGCCGGGCCCGCCGCCGGCGTTC CTGGGCGGGCTCGCGAGCCTCCGCTACCTCAACCTCTCCGGCATCTACTTCTCCGGCGAG GTCCCACCCCACCTCGGGAACCTCTCGAGCCTCCGCTACCTCGACCTCTCCACCGATTTC TCCCCGCAGCTCGCGCGCTCGTCGGAGCTCTCATGGCTCGCCCGCATGCCATCGCTGCGC CACCTGAGCTTGAGCTCGGTCGACCTGAGCAGCGCGCGAGACTGGCCTCTCGCCATCGCC ATGCTCCCATCCCTCACAGCCCTCCACCTCTCCTCCTGCTCGCTCCCGAGCTCGAGCACG CAACAATGGCGGCGGCTTCTTCCTCGCAACCTCACCAACCTCAAGTTGCTCGACCTCTCC ATGAACCACCTCGACCACCGAGCCGAGCTCGCCTGGATCTGGAACATCACGAGCCTCACC GACCTGAACCTGATGGGGACCCACCTGCACGGCCAGATCCCCGACGAGCTGGACGCCATG GCATCCCTCCAGGTTCTTGATCTCTCCTACAATGGCAACAGGGCCACCATGCCAAGAAGC CTGAGAGGCCTCTGCAATCTGAGGGTGCTAGATCTCGATTCGGCCCTCGACGGCGGCGAC ATCGGCGAGCTGATGCAGAGGCTGCCGCAGCAGTGTTCATCATCAAACATGTTGCAGGAA TTGTACCTGCCAAACAATGGTATGACAAGAACCTTGCCGGATTATGACAAACTGATGCAT CTGACCGGGTTGCGCGTTCTTGATCTCTCTTATAACAATCTCACTGGTCCGATACCGCGG TCGATGGGGAATTTGTCAGGTTTGGACATTCTTGATCTGTCTTTCAATAACCTCACCGGA TTGATACCGGCAGGAGAAGGGTGTTTTGCAGGTTTGAGCACCCTTGTGTTGTCTGAAAAT TTCCTCACTGGACAAATCCCTGAAGAAATTGGGTATCTTGGTAGCTTAACCACACTAGAC CTCTATGGTAACCACCTCAGTGGACATGTTCCTTCCGAGATCGGTAAGCTCGCTAATTTG ACTTACCTTGACATCAGTAGAAATGATCTTGATGGTGTGATCACTGAAGAGCACTTTGCT AGATTGGCGAGGTTAACGACGATAGACTTGTCTCTGAATCCCCTCAAGATTGAGGTGGGT TCAGAGTGGAAGCCTCCCTTCAGTCTCGAGAAAGTGAATTTTTCGCATTGCGCAATGGGT CCTTTGTTTCCTGCATGGCTTCAGTGGCAGGTGGATTTCTCCTGCCTTGATATCTCAAGC ACAGGTATAAATGATACGCTTCCGGATTGGCTCAGCACTGCATTTCCAAAGATGGCAGTT TTGGATATCTCCGAGAACTCGATATATGGCGGGTTGCCGGCAAATTTGGAGGCCATGTCA ATTCAAGAACTCTATCTCAGTTCAAACCAACTTACTGGGCACATACCAAAGCTACCAAGG AATATCACCATCTTGGACATCTCCATAAACTCATTGTCAGGGCCTTTGCCAAAGATTCAG TCTCCGAAATTGCTATCGCTAATTCTGTTCTCAAATCACATCACAGGTACAATTCCTGAA TCCATCTGCGAATCGCAGGACTTGTTTATCTTAGACTTGGCGAACAATCTTTTAGTTGGA GAACTACCCCGATGCGATTCGATGGGAACCATGAGGTACCTGCTTTTGAGTAACAATAGC CTCTCTGGTGAATTCCCACAATTTGTGCAAAGCTGCACAAGTTTGGGTTTCCTGGATCTT GGATGGAATAGCTTCTCTGGAACACTGCCAATGTGGATTGGGGACTTGGTGCAGCTACAA TTTCTGCAGTTAAGCTATAACATGTTCTCCGGTAATATTCCAAACATCTTAACAAAGCTC AAACTCCTCCATCATTTGAATCTTGCAGGAAATAATATATCAGGAACCATACCTCGGGGT TTGTCGAATTTAACTGCTATGACACAAACAAAAGGAATAGTTCATTCATTCCCTTACCAA GGGTATGCAAGTGTAGTTGGTGAGCCTGGAAATAGCTTGTCTGTGGTCACCAAGGGCCAA GAACTCAACTATGGTGTTGGAATTTTGGATATGGTAAGCATTGACTTATCACTCAATGAC TTGACTGGGATAATTCCAGAAGAAATGATTTCTCTTGATGCGTTATTAAACTTGAATCTA TCATGGAATCGCTTGAGTGGCAAAATTCCAGAAAAGATTGGGATCATTCGGTCGTTGGAA TCGCTTGACCTATCGAGAAACATGCTCTCCGGAGAAATCCCTTCAAGCTTGTCAAATCTG ACATATCTAAGCTTCTTGGATTTGGCTGACAACAATCTTACAGGAAGAATACCGTCAGGA TCGCAACTTGACACCCTCTATGAGGAGCATCCATATATGTACGGTGGCAATAGCGGCCTC TGCGGGCCGCCTCTTCGAGAAAATTGTTCAGCAAATGATGCATCAAAGCTAGATGGACAG GAAATAGCTGAGCGTGACTTTGATCCAATGTCCTTTGGTTTTGGACACTGTTTGGGGTTC GTGTTCGGTCTATGGGTTGTGTTCTGCGTCCTATTGTTCAAGAAATCTTGGAGGCTTTGT TATTTCTGCTTCATTGACAGAATATACGATCAGATATATGTCTTTTTAGTTCTTACATGT AAAAGATTTGGCAGAGGGTGA

Peptide Sequence

PEP ID	Os11t0558400-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:20748838:20751918:-1 gene:Os11g0558400 transcript:Os11t0558400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0558400-00)
Sequence	MSARRLAATFLLAAAATLSLACVPEERDALLAFRDGVTGDPAGRLATWRRRGGGGDCCRW RGVRCSNRTNGHVVALRLRNDAAAAAGGGGAEHDDRGYYAGGAALVGAISPALLSLRRLR HLDLSRNYLQGSPPGPPPAFLGGLASLRYLNLSGIYFSGEVPPHLGNLSSLRYLDLSTDF SPQLARSSELSWLARMPSLRHLSLSSVDLSSARDWPLAIAMLPSLTALHLSSCSLPSSST QQWRRLLPRNLTNLKLLDLSMNHLDHRAELAWIWNITSLTDLNLMGTHLHGQIPDELDAM ASLQVLDLSYNGNRATMPRSLRGLCNLRVLDLDSALDGGDIGELMQRLPQQCSSSNMLQE LYLPNNGMTRTLPDYDKLMHLTGLRVLDLSYNNLTGPIPRSMGNLSGLDILDLSFNNLTG LIPAGEGCFAGLSTLVLSENFLTGQIPEEIGYLGSLTTLDLYGNHLSGHVPSEIGKLANL TYLDISRNDLDGVITEEHFARLARLTTIDLSLNPLKIEVGSEWKPPFSLEKVNFSHCAMG PLFPAWLQWQVDFSCLDISSTGINDTLPDWLSTAFPKMAVLDISENSIYGGLPANLEAMS IQELYLSSNQLTGHIPKLPRNITILDISINSLSGPLPKIQSPKLLSLILFSNHITGTIPE SICESQDLFILDLANNLLVGELPRCDSMGTMRYLLLSNNSLSGEFPQFVQSCTSLGFLDL GWNSFSGTLPMWIGDLVQLQFLQLSYNMFSGNIPNILTKLKLLHHLNLAGNNISGTIPRG LSNLTAMTQTKGIVHSFPYQGYASVVGEPGNSLSVVTKGQELNYGVGILDMVSIDLSLND LTGIIPEEMISLDALLNLNLSWNRLSGKIPEKIGIIRSLESLDLSRNMLSGEIPSSLSNL TYLSFLDLADNNLTGRIPSGSQLDTLYEEHPYMYGGNSGLCGPPLRENCSANDASKLDGQ EIAERDFDPMSFGFGHCLGFVFGLWVVFCVLLFKKSWRLCYFCFIDRIYDQIYVFLVLTC KRFGRG

Transcript Sequence

Transcript ID	Os11t0558400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20748838:20751918:-1 gene:Os11g0558400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0558400-00)
Sequence	ATGTCCGCGCGCCGCCTCGCCGCGACGTTCTTGCTCGCCGCCGCCGCCACCCTGTCGCTG GCATGCGTGCCGGAGGAGCGCGACGCGCTGCTGGCGTTCAGGGACGGCGTCACCGGCGAC CCCGCGGGGCGCCTCGCCACGTGGCGGCGTCGGGGAGGAGGCGGCGACTGCTGCCGGTGG CGTGGCGTCCGGTGCAGCAACCGGACGAACGGGCACGTGGTGGCGCTCCGCCTCCGCAAC GACGCCGCCGCCGCCGCAGGCGGCGGCGGCGCGGAGCACGACGACCGAGGGTACTACGCC GGCGGCGCGGCGCTCGTCGGCGCGATCAGCCCGGCGCTCCTCTCCCTCCGCCGGCTGCGC CACCTCGACCTCAGCCGTAACTACCTCCAGGGCTCGCCGCCGGGCCCGCCGCCGGCGTTC CTGGGCGGGCTCGCGAGCCTCCGCTACCTCAACCTCTCCGGCATCTACTTCTCCGGCGAG GTCCCACCCCACCTCGGGAACCTCTCGAGCCTCCGCTACCTCGACCTCTCCACCGATTTC TCCCCGCAGCTCGCGCGCTCGTCGGAGCTCTCATGGCTCGCCCGCATGCCATCGCTGCGC CACCTGAGCTTGAGCTCGGTCGACCTGAGCAGCGCGCGAGACTGGCCTCTCGCCATCGCC ATGCTCCCATCCCTCACAGCCCTCCACCTCTCCTCCTGCTCGCTCCCGAGCTCGAGCACG CAACAATGGCGGCGGCTTCTTCCTCGCAACCTCACCAACCTCAAGTTGCTCGACCTCTCC ATGAACCACCTCGACCACCGAGCCGAGCTCGCCTGGATCTGGAACATCACGAGCCTCACC GACCTGAACCTGATGGGGACCCACCTGCACGGCCAGATCCCCGACGAGCTGGACGCCATG GCATCCCTCCAGGTTCTTGATCTCTCCTACAATGGCAACAGGGCCACCATGCCAAGAAGC CTGAGAGGCCTCTGCAATCTGAGGGTGCTAGATCTCGATTCGGCCCTCGACGGCGGCGAC ATCGGCGAGCTGATGCAGAGGCTGCCGCAGCAGTGTTCATCATCAAACATGTTGCAGGAA TTGTACCTGCCAAACAATGGTATGACAAGAACCTTGCCGGATTATGACAAACTGATGCAT CTGACCGGGTTGCGCGTTCTTGATCTCTCTTATAACAATCTCACTGGTCCGATACCGCGG TCGATGGGGAATTTGTCAGGTTTGGACATTCTTGATCTGTCTTTCAATAACCTCACCGGA TTGATACCGGCAGGAGAAGGGTGTTTTGCAGGTTTGAGCACCCTTGTGTTGTCTGAAAAT TTCCTCACTGGACAAATCCCTGAAGAAATTGGGTATCTTGGTAGCTTAACCACACTAGAC CTCTATGGTAACCACCTCAGTGGACATGTTCCTTCCGAGATCGGTAAGCTCGCTAATTTG ACTTACCTTGACATCAGTAGAAATGATCTTGATGGTGTGATCACTGAAGAGCACTTTGCT AGATTGGCGAGGTTAACGACGATAGACTTGTCTCTGAATCCCCTCAAGATTGAGGTGGGT TCAGAGTGGAAGCCTCCCTTCAGTCTCGAGAAAGTGAATTTTTCGCATTGCGCAATGGGT CCTTTGTTTCCTGCATGGCTTCAGTGGCAGGTGGATTTCTCCTGCCTTGATATCTCAAGC ACAGGTATAAATGATACGCTTCCGGATTGGCTCAGCACTGCATTTCCAAAGATGGCAGTT TTGGATATCTCCGAGAACTCGATATATGGCGGGTTGCCGGCAAATTTGGAGGCCATGTCA ATTCAAGAACTCTATCTCAGTTCAAACCAACTTACTGGGCACATACCAAAGCTACCAAGG AATATCACCATCTTGGACATCTCCATAAACTCATTGTCAGGGCCTTTGCCAAAGATTCAG TCTCCGAAATTGCTATCGCTAATTCTGTTCTCAAATCACATCACAGGTACAATTCCTGAA TCCATCTGCGAATCGCAGGACTTGTTTATCTTAGACTTGGCGAACAATCTTTTAGTTGGA GAACTACCCCGATGCGATTCGATGGGAACCATGAGGTACCTGCTTTTGAGTAACAATAGC CTCTCTGGTGAATTCCCACAATTTGTGCAAAGCTGCACAAGTTTGGGTTTCCTGGATCTT GGATGGAATAGCTTCTCTGGAACACTGCCAATGTGGATTGGGGACTTGGTGCAGCTACAA TTTCTGCAGTTAAGCTATAACATGTTCTCCGGTAATATTCCAAACATCTTAACAAAGCTC AAACTCCTCCATCATTTGAATCTTGCAGGAAATAATATATCAGGAACCATACCTCGGGGT TTGTCGAATTTAACTGCTATGACACAAACAAAAGGAATAGTTCATTCATTCCCTTACCAA GGGTATGCAAGTGTAGTTGGTGAGCCTGGAAATAGCTTGTCTGTGGTCACCAAGGGCCAA GAACTCAACTATGGTGTTGGAATTTTGGATATGGTAAGCATTGACTTATCACTCAATGAC TTGACTGGGATAATTCCAGAAGAAATGATTTCTCTTGATGCGTTATTAAACTTGAATCTA TCATGGAATCGCTTGAGTGGCAAAATTCCAGAAAAGATTGGGATCATTCGGTCGTTGGAA TCGCTTGACCTATCGAGAAACATGCTCTCCGGAGAAATCCCTTCAAGCTTGTCAAATCTG ACATATCTAAGCTTCTTGGATTTGGCTGACAACAATCTTACAGGAAGAATACCGTCAGGA TCGCAACTTGACACCCTCTATGAGGAGCATCCATATATGTACGGTGGCAATAGCGGCCTC TGCGGGCCGCCTCTTCGAGAAAATTGTTCAGCAAATGATGCATCAAAGCTAGATGGACAG GAAATAGCTGAGCGTGACTTTGATCCAATGTCCTTTGGTTTTGGACACTGTTTGGGGTTC GTGTTCGGTCTATGGGTTGTGTTCTGCGTCCTATTGTTCAAGAAATCTTGGAGGCTTTGT TATTTCTGCTTCATTGACAGAATATACGATCAGATATATGTCTTTTTAGTTCTTACATGT AAAAGATTTGGCAGAGGGTGA