Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0558300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:20743741:20748358:1 gene:Os11g0558300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl CoA synthetase (EC 6.2.1.3). (Os11t0558300-01)
Sequence	ATGGAGGAGACGTACACCGTGAAGGTGGGTGAAGCAACTCCGGCCGCCGGCGGCAAGCCG TCGGCCGGGCCAGTCTACCGGAGCATCTACTCCAAGGATGGCCTCATGAAGCTCCCTGAA GATATCCTGTCCCCTTGGGACTTCTTCAGTGGAGCAGTCAAGCAGTACCCCAAGAACAAG ATGCTGGGCCAGCGCAAAGTTTCAGATGGCAAGGCTGGTGACTATGTGTGGCTAACATAT GAAGAAGTGTACCAGAAGGTCATTAAGATTGGATCAGCCATCAGAAGCTTACGTGTCAAG CCGGGTGGTCACTGTGGCATATATGGATCAAACTGTCCAGAATGGGTTATGGCTATGCAG GCTTGCAACAGCCAAGGAATATGCTATGTTCCACTGTATGACACCCTTGGTGCAAATGCA GTTGAATTCATAATGGATCATGCTGAGATCTCTATAGCATTTGTGCAGGAAAGCAAGATA CAATCAGTATTATCTGTAGTCAAGAGGTGCAGAGCCCACATCAAAGCAATAGTTAGTTTT GGAGATGTGACAAGTGAACTGAAAAGAGAAGCTGAACAGTTAGGAGTATCTTGCTTTTCT TGGGAAGAATTTTCTTCAATGGGAAAGCAAAACTATGAACTTCCCAAGAAACAAAAGGAT GACATTTGCACAATCATGTATACAAGTGGAACAACTGGAGACCCGAAGGGTGTGATAATC ACAAACAGAGCTCTAATTGCCGGTGTTATGACCACAGAACATCTTCTGAAAGTGACAGAC AAAGTGGTGGCTGAAGATGATTCCTACTTTTCCTATCTCCCATTAGCTCACATATTTGAT CAAGTAATTGGAAACTACTGCATTTCTAAAGGAGCCTCCATTGGATTCTGGCAAGCGGAC ATTAGGTATCTCATGGAGGATGTGCAAATGATGAAACCAACGGTATTTTGTGGTGTCCCT CGTGTTTATGATCGTATATACACAGGTATTAATCAGAAAATTCAGTCTGGAGGGATGATA GCCAAAAGCCTTTTCCAGTATGCATACAACTACAAACTTGGAAATTTGCGGAAAGGGTTG AAACAGGATGAAGCCTCGCCATTTTTTGACAAAATAGTTTTCAGTAAAATAAAAGAAGGG CTTGGAGGCCGGATACGACTCCTTCTATCAGGAGCAGCACCTTTGCCAAGACACGTCGAA GAATTCATGCGGGTTACCAGCTGCAGTGTACTTGTACAAGGATATGGGCTAACAGAGAGT TGCTCAGGATGCTTCACATCAATCGCCAATGTTTTCTCAATGATTGGATCAGTTGGTCCT CCTGTGACGACAATCGAGGCACGGTTAGAATCCATTCCAGAAATGGGGTATGACGCACTC TCAAATGTGCCTAGGGGTGAGATCTGCTTGAGGGGTCACACCTTGTTCTCCGGGTACTAC AAGCGCCCTGACCTCACCGAGGAAGTATTCTCAGATGGTTGGTTCCATACAGGTGATATC GGTGAGTGGCAACCAGACGGCACAATGAAGATCATCGACAGAAAGAAGAACATTTTCAAG CTGTCCCAAGGGGAGTATGTAGCAGTGGAGGTCCTGGAAAGCGCATACGTGCAGTCTCCT CTCGTTACATCAGTTTGGGTCTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTGGTT GTCCCTGAGAAGCAGGCCATTGAGGATTGGGCTGCACAAAACAACAAGACTGGTAACTTT GCAGAATTGTGCAACGATCCGAAGGCAAGAATGTACATACAGGATGAGCTAAACAAAACT GGCAAAAGACTAGGGTTGAGAGGATTTGAGATGCTAAAGGCAATTCACCTAGAGACAACG CCATTCAGCATAGAGAAGGACCTGGTGACTCCAACTTTTAAGCTCAAGAGACCCCAGCTG CTCAAATATTACAAGGATTGCATTGATCAGCTGTACAAGGATGCCAAGGTGGGAAATAAA CAGTGA

Peptide Sequence

PEP ID	Os11t0558300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:20743741:20748358:1 gene:Os11g0558300 transcript:Os11t0558300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl CoA synthetase (EC 6.2.1.3). (Os11t0558300-01)
Sequence	MEETYTVKVGEATPAAGGKPSAGPVYRSIYSKDGLMKLPEDILSPWDFFSGAVKQYPKNK MLGQRKVSDGKAGDYVWLTYEEVYQKVIKIGSAIRSLRVKPGGHCGIYGSNCPEWVMAMQ ACNSQGICYVPLYDTLGANAVEFIMDHAEISIAFVQESKIQSVLSVVKRCRAHIKAIVSF GDVTSELKREAEQLGVSCFSWEEFSSMGKQNYELPKKQKDDICTIMYTSGTTGDPKGVII TNRALIAGVMTTEHLLKVTDKVVAEDDSYFSYLPLAHIFDQVIGNYCISKGASIGFWQAD IRYLMEDVQMMKPTVFCGVPRVYDRIYTGINQKIQSGGMIAKSLFQYAYNYKLGNLRKGL KQDEASPFFDKIVFSKIKEGLGGRIRLLLSGAAPLPRHVEEFMRVTSCSVLVQGYGLTES CSGCFTSIANVFSMIGSVGPPVTTIEARLESIPEMGYDALSNVPRGEICLRGHTLFSGYY KRPDLTEEVFSDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVAVEVLESAYVQSP LVTSVWVYGNSFESFLVAVVVPEKQAIEDWAAQNNKTGNFAELCNDPKARMYIQDELNKT GKRLGLRGFEMLKAIHLETTPFSIEKDLVTPTFKLKRPQLLKYYKDCIDQLYKDAKVGNK Q

Transcript Sequence

Transcript ID	Os11t0558300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20743741:20748358:1 gene:Os11g0558300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl CoA synthetase (EC 6.2.1.3). (Os11t0558300-01)
Sequence	ACTCCAATGCAATAACCTCCTCATCTTCAAGCTCTCATCAGCTAGCAATCCATATTCTCA GCAGAGAAAAAGATCTGCATTTTCACTGTGCTTTGCAGAGAAAAAGGATGGAGGAGACGT ACACCGTGAAGGTGGGTGAAGCAACTCCGGCCGCCGGCGGCAAGCCGTCGGCCGGGCCAG TCTACCGGAGCATCTACTCCAAGGATGGCCTCATGAAGCTCCCTGAAGATATCCTGTCCC CTTGGGACTTCTTCAGTGGAGCAGTCAAGCAGTACCCCAAGAACAAGATGCTGGGCCAGC GCAAAGTTTCAGATGGCAAGGCTGGTGACTATGTGTGGCTAACATATGAAGAAGTGTACC AGAAGGTCATTAAGATTGGATCAGCCATCAGAAGCTTACGTGTCAAGCCGGGTGGTCACT GTGGCATATATGGATCAAACTGTCCAGAATGGGTTATGGCTATGCAGGCTTGCAACAGCC AAGGAATATGCTATGTTCCACTGTATGACACCCTTGGTGCAAATGCAGTTGAATTCATAA TGGATCATGCTGAGATCTCTATAGCATTTGTGCAGGAAAGCAAGATACAATCAGTATTAT CTGTAGTCAAGAGGTGCAGAGCCCACATCAAAGCAATAGTTAGTTTTGGAGATGTGACAA GTGAACTGAAAAGAGAAGCTGAACAGTTAGGAGTATCTTGCTTTTCTTGGGAAGAATTTT CTTCAATGGGAAAGCAAAACTATGAACTTCCCAAGAAACAAAAGGATGACATTTGCACAA TCATGTATACAAGTGGAACAACTGGAGACCCGAAGGGTGTGATAATCACAAACAGAGCTC TAATTGCCGGTGTTATGACCACAGAACATCTTCTGAAAGTGACAGACAAAGTGGTGGCTG AAGATGATTCCTACTTTTCCTATCTCCCATTAGCTCACATATTTGATCAAGTAATTGGAA ACTACTGCATTTCTAAAGGAGCCTCCATTGGATTCTGGCAAGCGGACATTAGGTATCTCA TGGAGGATGTGCAAATGATGAAACCAACGGTATTTTGTGGTGTCCCTCGTGTTTATGATC GTATATACACAGGTATTAATCAGAAAATTCAGTCTGGAGGGATGATAGCCAAAAGCCTTT TCCAGTATGCATACAACTACAAACTTGGAAATTTGCGGAAAGGGTTGAAACAGGATGAAG CCTCGCCATTTTTTGACAAAATAGTTTTCAGTAAAATAAAAGAAGGGCTTGGAGGCCGGA TACGACTCCTTCTATCAGGAGCAGCACCTTTGCCAAGACACGTCGAAGAATTCATGCGGG TTACCAGCTGCAGTGTACTTGTACAAGGATATGGGCTAACAGAGAGTTGCTCAGGATGCT TCACATCAATCGCCAATGTTTTCTCAATGATTGGATCAGTTGGTCCTCCTGTGACGACAA TCGAGGCACGGTTAGAATCCATTCCAGAAATGGGGTATGACGCACTCTCAAATGTGCCTA GGGGTGAGATCTGCTTGAGGGGTCACACCTTGTTCTCCGGGTACTACAAGCGCCCTGACC TCACCGAGGAAGTATTCTCAGATGGTTGGTTCCATACAGGTGATATCGGTGAGTGGCAAC CAGACGGCACAATGAAGATCATCGACAGAAAGAAGAACATTTTCAAGCTGTCCCAAGGGG AGTATGTAGCAGTGGAGGTCCTGGAAAGCGCATACGTGCAGTCTCCTCTCGTTACATCAG TTTGGGTCTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTGGTTGTCCCTGAGAAGC AGGCCATTGAGGATTGGGCTGCACAAAACAACAAGACTGGTAACTTTGCAGAATTGTGCA ACGATCCGAAGGCAAGAATGTACATACAGGATGAGCTAAACAAAACTGGCAAAAGACTAG GGTTGAGAGGATTTGAGATGCTAAAGGCAATTCACCTAGAGACAACGCCATTCAGCATAG AGAAGGACCTGGTGACTCCAACTTTTAAGCTCAAGAGACCCCAGCTGCTCAAATATTACA AGGATTGCATTGATCAGCTGTACAAGGATGCCAAGGTGGGAAATAAACAGTGATGGTAAA ACAGAACCAAGTGGTTATTGAATTTCATGATTATTCAGAAGGAATCATGTACATATCAAT AATCATGATTCAAGAGTTAAAGGCCTATCTTTTTAAGATAAAGAGTTAAAGCCTATCTGT TGTGTCTCTAGATGTAAGAACTAATATACATATATATACTATTCTGTCATTC