Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0557700-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:20720771:20723628:1 gene:Os11g0557700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to S-adenosylmethionine-dependent methyltransferase/ catalytic. (Os11t0557700-01);Similar to S-adenosylmethionine-dependent methyltransferase/ catalytic. (Os11t0557700-02)
Sequence	CCTGCTTCATTGCTCACTCCGGCGGCGATGGCCGACGACGTCGCGCCGCGCACCGCCTCC GCCTACCTCGACCCCTCCTACTGGGACGAGCGGTTCGGGAAGGAGGAGCACTATGAGTGG TTCAAGGATTTCTCCCACTTCCGCCACCTCCTCGCCCCGCTCCTCTCCCCTTCCATCTCG GTTCTTGAGGTTGGGTGTGGCAACTCGCGGCTCGGGGAGGAGCTGCTGCGGGAGGGCGTC GCCGGCGGCATCACCTGCGTTGACCTCTCGCCCGTCGCCGTCCAGCGGATGCGTGACCGC CTCGCGGAGCAGGGCACCGAGGGTGTGGAGGTTGTGGTGGCGGACATGCTTGATCTGCCG TTCGATCGTGAGAGCTTCGATCTCGTGATTGAGAAAGGCACCATGGACGTATTATTTGTG GACAGTGGTGATCCTTGGAACCCAAATCCTACAACAGTGGATAATGTGATGAAAATGCTT GAAGGTATCCACAAGGTTTTGAAGCCTGAAGGCATATTTGTATCAATTACCTTTGGACAG CCACATTTCCGTCGTCGATTTTTTGAAGCACCTGGGTTTACATGGTCTGTTGAGTGGAGC ACCTTTGGTGATGGCTTCCATTATTTCTTCTATATTCTTAAAAAGGGCAAGAGGTTGTTG GATTCCAACGGTAACCAACATACACAGCCTGCTGCTCCAAGCATTAATATGTTCCATGAA GAGCTTGAGAGTGAGGACTACATATTCCGAACAAATGTTGATGAGTTGTAA

Peptide Sequence

PEP ID	Os11t0557700-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:20720771:20723628:1 gene:Os11g0557700 transcript:Os11t0557700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to S-adenosylmethionine-dependent methyltransferase/ catalytic. (Os11t0557700-01);Similar to S-adenosylmethionine-dependent methyltransferase/ catalytic. (Os11t0557700-02)
Sequence	PASLLTPAAMADDVAPRTASAYLDPSYWDERFGKEEHYEWFKDFSHFRHLLAPLLSPSIS VLEVGCGNSRLGEELLREGVAGGITCVDLSPVAVQRMRDRLAEQGTEGVEVVVADMLDLP FDRESFDLVIEKGTMDVLFVDSGDPWNPNPTTVDNVMKMLEGIHKVLKPEGIFVSITFGQ PHFRRRFFEAPGFTWSVEWSTFGDGFHYFFYILKKGKRLLDSNGNQHTQPAAPSINMFHE ELESEDYIFRTNVDEL

Transcript Sequence

Transcript ID	Os11t0557700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20720771:20723628:1 gene:Os11g0557700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to S-adenosylmethionine-dependent methyltransferase/ catalytic. (Os11t0557700-01);Similar to S-adenosylmethionine-dependent methyltransferase/ catalytic. (Os11t0557700-02)
Sequence	CCTGCTTCATTGCTCACTCCGGCGGCGATGGCCGACGACGTCGCGCCGCGCACCGCCTCC GCCTACCTCGACCCCTCCTACTGGGACGAGCGGTTCGGGAAGGAGGAGCACTATGAGTGG TTCAAGGATTTCTCCCACTTCCGCCACCTCCTCGCCCCGCTCCTCTCCCCTTCCATCTCG GTTCTTGAGGTTGGGTGTGGCAACTCGCGGCTCGGGGAGGAGCTGCTGCGGGAGGGCGTC GCCGGCGGCATCACCTGCGTTGACCTCTCGCCCGTCGCCGTCCAGCGGATGCGTGACCGC CTCGCGGAGCAGGGCACCGAGGGTGTGGAGGTTGTGGTGGCGGACATGCTTGATCTGCCG TTCGATCGTGAGAGCTTCGATCTCGTGATTGAGAAAGGCACCATGGACGTATTATTTGTG GACAGTGGTGATCCTTGGAACCCAAATCCTACAACAGTGGATAATGTGATGAAAATGCTT GAAGGTATCCACAAGGTTTTGAAGCCTGAAGGCATATTTGTATCAATTACCTTTGGACAG CCACATTTCCGTCGTCGATTTTTTGAAGCACCTGGGTTTACATGGTCTGTTGAGTGGAGC ACCTTTGGTGATGGCTTCCATTATTTCTTCTATATTCTTAAAAAGGGCAAGAGGTTGTTG GATTCCAACGGTAACCAACATACACAGCCTGCTGCTCCAAGCATTAATATGTTCCATGAA GAGCTTGAGAGTGAGGACTACATATTCCGAACAAATGTTGATGAGTTGTAACTGGCAATT TAACAAGTGCATCATCGGCTTGGGTGGGAGTTTTGATGAAGCTACTACACATCAAGAGAG ACGTCCCGTCCAGCATCAACTTGGTAGATGAATGATCTTGGACAGATGCATGGAAAGATC TTGCTTGGTGCTGTACCATTGCCCTGGCTAGGGATTTCTGTGCCAGCTGAATTGACTAGA AAACAGGTACCTTTATCATTGTTCCCAGATTTTTAGTAAACCTTCCAAAGAAGTTCCCTT TTGTTTCCAAACAATGCACTTCTTTGCTACTCCCTCCGTTTCATATTATAATTCGTTTGA CTTTTTTAAATTCTATTTTTTTAAGTTTGACCAAGTTTGTAGAAAAATATAGTAACATTT TTAACCCAAAACAAACATATTATTAAAATATATTCAATGTTAAATTTAATGAAACTAATT TGGTGTTGTTAATGTTGCTAGTTTTTTTTTATAAACTTGGCCAAACCTAAAGAACTTTGA CCAAGTAAAAAGTCAAACGATTTATATGAAACGGAGGGAGTACTAAAGTAGCAATGATGT TATCTGATGCTGCAAATATGCCTTCTGACGGTGTCAACTGTGGCCTAGTTTGGCACGTCC AAAATCCTGGTCTATCCCATGGGGTGAGTAATTTGGTTCAATTTCCTGGGCATTTGCAAG CTAGGCCTTCAGTTTCATGTTAGGACTTGTCTGGAATTCATGGAAAATTTTATGGGAACC TTGCTTTGTTCTATACTCCCCACTACTAATGACCTACTTTGTGGAGTTCCTAAAAAATTA TGACAGATGCCTTAATCAATGCTCCATTTATTTCAAAATATAAGGCAGATGTTTCAT