Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0552600-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20572147:20575907:-1 gene:Os11g0552600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Kinesin-like protein. (Os11t0552600-01)
Sequence

AATAAGTTGAGTGAGAATGGAAAGCAAAGAGGGCACATCCCCTATCGTGATAGTAAGTTG
ACGCGCATTTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGCT
GCTCCTGAGGAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGCA
AAATGTGTCAGCAACTGTGCTCAAGTGAATGAGATTTTAACAGATGCAGCTCTGCTGAAG
AGGCAAAAGCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGGTTCTCATTCCGAAGTG
TTGGAGCAGGTTATACTAAAGCAGCGCAATGACATGCACAAGTCTGAACTTGAGCGTGAT
CGACTAGCAATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTTG
GCTGAGCAACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTTC
ACTGATTCTATCCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGAG
TTTGTTGCAAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAAT
TTAGGGACTGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGAT
CTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAAA
GCATCAGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAG
GACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAG
GAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCG
AGGCAGGACGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATG
GAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCG
CTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTGC
AAGACGTCCCAGTTGGCCTTGCCCTGA

Peptide Sequence

PEP ID

Os11t0552600-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20572147:20575907:-1 gene:Os11g0552600 transcript:Os11t0552600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Kinesin-like protein. (Os11t0552600-01)
Sequence

NKLSENGKQRGHIPYRDSKLTRILQPALGGNAKTSIICTAAPEEIHVEETRGTLQFASRA
KCVSNCAQVNEILTDAALLKRQKQEIEELRKKLQGSHSEVLEQVILKQRNDMHKSELERD
RLAMELDEERRLRETLEHRLAEQQKMLDGISNTSISPDQFTDSIQFESLKTPTSKERPAE
FVASRANYSKDVEFSPIPENLGTVADEDLWMQLNKGCVTDLEMLEMTPGFKCAPSLADDK
ASVATPDEEPIDARCQRLEKDCTADRQQLEDSKAWRAALEEERDTLKRENSSLLDALAKA
RQDADHLVADRLEALRELDMEKSRMDELKQEIKLFSQAFSLRQGQLTSLYTKSKAIVENC
KTSQLALP

Transcript Sequence

Transcript ID

Os11t0552600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20572147:20575907:-1 gene:Os11g0552600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Kinesin-like protein. (Os11t0552600-01)
Sequence

CAATAAGTTGAGTGAGAATGGAAAGCAAAGAGGGCACATCCCCTATCGTGATAGTAAGTT
GACGCGCATTTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGC
TGCTCCTGAGGAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGC
AAAATGTGTCAGCAACTGTGCTCAAGTGAATGAGATTTTAACAGATGCAGCTCTGCTGAA
GAGGCAAAAGCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGGTTCTCATTCCGAAGT
GTTGGAGCAGGTTATACTAAAGCAGCGCAATGACATGCACAAGTCTGAACTTGAGCGTGA
TCGACTAGCAATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTT
GGCTGAGCAACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTT
CACTGATTCTATCCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGA
GTTTGTTGCAAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAA
TTTAGGGACTGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGA
TCTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAA
AGCATCAGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAA
GGACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGA
GGAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGC
GAGGCAGGACGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACAT
GGAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTC
GCTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTG
CAAGACGTCCCAGTTGGCCTTGCCCTGATGTTTCTTCCTCTTCTTCTTCAGCAGCAACTG
CAGAGAAGCGTGTTACGCATTCGATCCATCTGCAACCAATTCTTAAATTGCAGATTGTGT
AGTGTATTTGTTTGCTGTACGTGTGTGCTGGATTAGATTGCGTGGTATTACGAGCCGTGT
GCAAAGCTCCTGTGAAGTAGTAGTGTATACCGAAAAAAAAAACATTGCTATTGTTTGTGA
TTTGGAGGAC