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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0551800-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:20518354:20520099:-1 gene:Os11g0551800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yippee-like protein 1 (DGL-1) (Mdgl-1). (Os11t0551800-02)
Sequence

ATGGCGGAGTTGGTTGGGCCGCGGGTGTACAGCTGCTGCCATTGCCGGAACCACGTCTGC
CTCCACGACGACATCATCTCCAAGGCCTTTCAGGGGAGGAACGGCCGTGCGTTTCTTTTC
TCTCATGCTATGAACATATCTATGGGTCCAAAGGAGGACAGGCAGCTTATGACAGGGCTT
CACACAGTTGCTGATATCTACTGCCGTGATTGCCGTGAGGTATTGGGTTGGAAGTATGAA
AGAGCATTTGAAGAATCCCAGAAGTACAAGGAAGGAAAATTCATATTTGAGAAGGCAAAG
ATTGTTAAAGAAAATTGGTAA

Peptide Sequence

PEP ID

Os11t0551800-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:20518354:20520099:-1 gene:Os11g0551800 transcript:Os11t0551800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yippee-like protein 1 (DGL-1) (Mdgl-1). (Os11t0551800-02)
Sequence

MAELVGPRVYSCCHCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNISMGPKEDRQLMTGL
HTVADIYCRDCREVLGWKYERAFEESQKYKEGKFIFEKAKIVKENW

Transcript Sequence

Transcript ID

Os11t0551800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20518354:20520099:-1 gene:Os11g0551800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yippee-like protein 1 (DGL-1) (Mdgl-1). (Os11t0551800-02)
Sequence

ATTCTCATCTCTCTCTCTCTTTCACTGTTTCTTCCTCCTCTGCACTTGGCGCAGCACAAA
GTCGATTCCTTTCCGCCTCAGCGGCGCCGCTTGTTTCGATCGAAGCATCGCGAGAGGCAG
CCCGCCGCCTGGGTTTCGTGCCGATTTTGATTTCCTTTTTCTTGGCCGCCTCTGCCTCTC
TCTCTCTCTCTCTCTCTCCCTTTCTTGGTTCGATTGTTCCTGGTTCTTGGCCTGATTGGT
TGAACCTGCTTCTTCTGGAATCAATTAGGGGAGAAATATTTGCAGGAGAGGGGCGGTGGC
GATGGCGGAGTTGGTTGGGCCGCGGGTGTACAGCTGCTGCCATTGCCGGAACCACGTCTG
CCTCCACGACGACATCATCTCCAAGGCCTTTCAGGGGAGGAACGGCCGTGCGTTTCTTTT
CTCTCATGCTATGAACATATCTATGGGTCCAAAGGAGGACAGGCAGCTTATGACAGGGCT
TCACACAGTTGCTGATATCTACTGCCGTGATTGCCGTGAGGTATTGGGTTGGAAGTATGA
AAGAGCATTTGAAGAATCCCAGAAGTACAAGGAAGGAAAATTCATATTTGAGAAGGCAAA
GATTGTTAAAGAAAATTGGTAATGACTGGAAAGGGTTGGCGTGCCAAACTTTCCTGTGAA
GCTAAAATTCATACCTTTGTACATAGCTGTCGTCTGTAAATTCGAATGTTTAGCCTGCAT
GATGTTGCTCATGCCATTTGTAATGTGCACTTGTTTTGCTGTTCATTTCTGTGAAGAAGA
CAGGCCTCTGTTTATTTCTTTGTCAACCATTTTCTCATTGTTCATAAATGGATAGCTTGT
ACATAATTATTTTCCTGTCTAAATGTTGAATGTTTGTCATCAAAGTAATTCCTTGTGAGT
TACAATGACATCTATTATTAGCTCATGACACTTAATGGATATGAAAAGAGCAGTAAAAGG
TAAATATATTTGCCC