Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0550900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20482685:20488052:-1 gene:Os11g0550900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0550900-01)
Sequence

ATGATCCTGCAGCAAAAGCCTGCGAGGGCCCGTCGACCGCCGCCGCCATTCCACGCTCGC
CGCCGGCGGCTGGGGCTCCGCCCTAGCGAGCGTGGCATCGGCAACGCAACTCCCCCTCGA
GCCGCCCCGCCGCCATCGCCGGCTGGCTCTGCCGGGTGCGCGCGCTTCCGGTCCACGCGC
CGGTTGGGGATTGCCCCGTCGTGCTCTAGCTTAACCGCGATCCTGGCGCAGGGAAGGGTT
GTGGGGCTAGGAGGTTGCAAGGTCGTCTTCTTCCCCCTCTTGGCGGCGGCGGCCGGTGAT
TCGAGGGGAAGGCAGAATGCTGGGGTTCTCCACCGGCCAGTTGGTGGTCATCCTCGGGGC
TTGCTCCCTCATGATGACGACATGATCAAGATCGCAAGGGTGGCGGGGAGGATGACCGGG
AGGGCGGTCGGGCGCCTCATGTTGTTCCGCAGGCAGATGGATGAGATCCTGGAGCAGACT
GCAGCAAAGCAGGTTAACAAGGAGCTTAAAGATGCTATGACACAGCTAGATTCAATTCGT
TATGAAGTCCAGAACTTATCTAGGTTTACTCCTGGACAGTTCATGAGGCAGCATAACCCT
GTAGGCGTGGATCATGAAGCAGAAAAAAATGATGCCGTTGATGGCTCTGCGCTTAATCTA
GAAGAACTTCGTCATCAAATCCGCAGTATGGTTCATGATGAAATTGAAAGCTTTTATAAA
ACAAATCCAGATAAGTTTTCCGGGAGGTTGGATAATGCTGACACCGTTAATAGATCTGGC
CCAGTTGAAGGTAAAGAAGCTGATGTAGCTGTTATCCCCACAATGTTGGCATCAAAGGAC
ATGAAATTGGCAAACACAGGCTCTACAGATCTACACAGCAAAGCAACAATGTATTCAAGA
TTAACTGAATCCCCAGAAATGAGTGGCAGTTCTGGACATCAATTCAAAGAGAGTGATGGG
TTATTAAATATACTACCAATATCAGCTGAAAGTGCTGGATTACTTCCAAGCCGCTCAGAT
AAACCACAAGGCTCAGACCTATTACTGGAGGCAACACTTGAAGCAGAGGTCGCAGAGCAC
GCAAAATCCTTCGCGCAGCAGCATCATGATGAACTGCACAAGGAGTGA

Peptide Sequence

PEP ID

Os11t0550900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20482685:20488052:-1 gene:Os11g0550900 transcript:Os11t0550900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0550900-01)
Sequence

MILQQKPARARRPPPPFHARRRRLGLRPSERGIGNATPPRAAPPPSPAGSAGCARFRSTR
RLGIAPSCSSLTAILAQGRVVGLGGCKVVFFPLLAAAAGDSRGRQNAGVLHRPVGGHPRG
LLPHDDDMIKIARVAGRMTGRAVGRLMLFRRQMDEILEQTAAKQVNKELKDAMTQLDSIR
YEVQNLSRFTPGQFMRQHNPVGVDHEAEKNDAVDGSALNLEELRHQIRSMVHDEIESFYK
TNPDKFSGRLDNADTVNRSGPVEGKEADVAVIPTMLASKDMKLANTGSTDLHSKATMYSR
LTESPEMSGSSGHQFKESDGLLNILPISAESAGLLPSRSDKPQGSDLLLEATLEAEVAEH
AKSFAQQHHDELHKE

Transcript Sequence

Transcript ID

Os11t0550900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20482685:20488052:-1 gene:Os11g0550900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0550900-01)
Sequence

AGGGCTGAATGATCCTGCAGCAAAAGCCTGCGAGGGCCCGTCGACCGCCGCCGCCATTCC
ACGCTCGCCGCCGGCGGCTGGGGCTCCGCCCTAGCGAGCGTGGCATCGGCAACGCAACTC
CCCCTCGAGCCGCCCCGCCGCCATCGCCGGCTGGCTCTGCCGGGTGCGCGCGCTTCCGGT
CCACGCGCCGGTTGGGGATTGCCCCGTCGTGCTCTAGCTTAACCGCGATCCTGGCGCAGG
GAAGGGTTGTGGGGCTAGGAGGTTGCAAGGTCGTCTTCTTCCCCCTCTTGGCGGCGGCGG
CCGGTGATTCGAGGGGAAGGCAGAATGCTGGGGTTCTCCACCGGCCAGTTGGTGGTCATC
CTCGGGGCTTGCTCCCTCATGATGACGACATGATCAAGATCGCAAGGGTGGCGGGGAGGA
TGACCGGGAGGGCGGTCGGGCGCCTCATGTTGTTCCGCAGGCAGATGGATGAGATCCTGG
AGCAGACTGCAGCAAAGCAGGTTAACAAGGAGCTTAAAGATGCTATGACACAGCTAGATT
CAATTCGTTATGAAGTCCAGAACTTATCTAGGTTTACTCCTGGACAGTTCATGAGGCAGC
ATAACCCTGTAGGCGTGGATCATGAAGCAGAAAAAAATGATGCCGTTGATGGCTCTGCGC
TTAATCTAGAAGAACTTCGTCATCAAATCCGCAGTATGGTTCATGATGAAATTGAAAGCT
TTTATAAAACAAATCCAGATAAGTTTTCCGGGAGGTTGGATAATGCTGACACCGTTAATA
GATCTGGCCCAGTTGAAGGTAAAGAAGCTGATGTAGCTGTTATCCCCACAATGTTGGCAT
CAAAGGACATGAAATTGGCAAACACAGGCTCTACAGATCTACACAGCAAAGCAACAATGT
ATTCAAGATTAACTGAATCCCCAGAAATGAGTGGCAGTTCTGGACATCAATTCAAAGAGA
GTGATGGGTTATTAAATATACTACCAATATCAGCTGAAAGTGCTGGATTACTTCCAAGCC
GCTCAGATAAACCACAAGGCTCAGACCTATTACTGGAGGCAACACTTGAAGCAGAGGTCG
CAGAGCACGCAAAATCCTTCGCGCAGCAGCATCATGATGAACTGCACAAGGAGTGATGCG
ATCTTTTGATAGGAACTGGTAGACATCTTGTACATTAAAAACTTCAAAAATTCTGACTAC
TATTGGAGTATTCTGATGCCCGTTGAGATGTAAGTGGACATAAAGGAATATAAGTTGTTG
ACCGGCGCAAAATTGGTGTCAACTTTCATAGGATGATGATCTGCGATGGTGATACCAAGT
AGTAGTAGTGGAAATCTTGTTGCTTATTTGATTGCAGCGGTATTATATTGTCCTTTAATT
GTTAAGTGTTCCTTTGGCACAATATTTTTATAGGAATTTTGTAGGATTTAAATTGTACGG
AAAACTTTCCTATTCTGTCGTTTGTACAAAGGATTGTGACATCAAGAATTCTATGGAATT
CCTTTGGAATGGCTAAGAGATGGGAATGTTGG