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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0549900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20433314:20437020:1 gene:Os11g0549900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to tubulin alpha-6 chain. (Os11t0549900-01)
Sequence

ATGGCGACCATGGCCGTGATCCGCCTCGCGCTCCCGGCGATCCCGGCGGCCGCGTCGTCG
TCGGCGTCGTCGGGGTGCAGCGTAAGGACGCGCACGCGGGGGCGTGTGGTGCGGATGCGG
GTGAGGTGCCGCGCTGTGGGGAGAGAGGGTGGGGAAGGGGAGGGGGAGGGGGAGGGGGAG
GAGGCGCCGGAGTCGCTGTTCGCGAAGGAGCTGACGCGGAGGGGGATGGCGTCGGGGGCG
GCGGCGGCGGGCGCCGGGGAGAAGGAGGTGGGGGCGGAGGAGGGCGGGAGGAAGCGGGTG
GCGGCGGCGGAGTTCGAGCGGGCGGCCGCCGGGGCGGATGGGCAGCGGGCGAAGTCCATG
GCTCTCAACAGTGAGGGCCTCGAGGGTCTTGTTCCACGGGCAAAGTTGCTATTGTCACTT
GGCAGTACATTTTTTCTTGGATTTGCCCCTTTGATTCTTGTTACAGTTTCTCTGTTTGCT
GTTCTTTATGTGTATTTTGGACCAAGTTTTGTACACGATGCAAGCAAGACACCAGTATCG
CCTCCACCATACATTGATCCATATGAGCTACTGGAAGATGAACGACTCTCTCGACCCTCC
CCAGATGTCTTCTAA

Peptide Sequence

PEP ID

Os11t0549900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20433314:20437020:1 gene:Os11g0549900 transcript:Os11t0549900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to tubulin alpha-6 chain. (Os11t0549900-01)
Sequence

MATMAVIRLALPAIPAAASSSASSGCSVRTRTRGRVVRMRVRCRAVGREGGEGEGEGEGE
EAPESLFAKELTRRGMASGAAAAGAGEKEVGAEEGGRKRVAAAEFERAAAGADGQRAKSM
ALNSEGLEGLVPRAKLLLSLGSTFFLGFAPLILVTVSLFAVLYVYFGPSFVHDASKTPVS
PPPYIDPYELLEDERLSRPSPDVF

Transcript Sequence

Transcript ID

Os11t0549900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20433314:20437020:1 gene:Os11g0549900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to tubulin alpha-6 chain. (Os11t0549900-01)
Sequence

GAAGCTCCACGAAGCCCACCACCTCCTCCTCCTCCACCACCACCAATGGCGACCATGGCC
GTGATCCGCCTCGCGCTCCCGGCGATCCCGGCGGCCGCGTCGTCGTCGGCGTCGTCGGGG
TGCAGCGTAAGGACGCGCACGCGGGGGCGTGTGGTGCGGATGCGGGTGAGGTGCCGCGCT
GTGGGGAGAGAGGGTGGGGAAGGGGAGGGGGAGGGGGAGGGGGAGGAGGCGCCGGAGTCG
CTGTTCGCGAAGGAGCTGACGCGGAGGGGGATGGCGTCGGGGGCGGCGGCGGCGGGCGCC
GGGGAGAAGGAGGTGGGGGCGGAGGAGGGCGGGAGGAAGCGGGTGGCGGCGGCGGAGTTC
GAGCGGGCGGCCGCCGGGGCGGATGGGCAGCGGGCGAAGTCCATGGCTCTCAACAGTGAG
GGCCTCGAGGGTCTTGTTCCACGGGCAAAGTTGCTATTGTCACTTGGCAGTACATTTTTT
CTTGGATTTGCCCCTTTGATTCTTGTTACAGTTTCTCTGTTTGCTGTTCTTTATGTGTAT
TTTGGACCAAGTTTTGTACACGATGCAAGCAAGACACCAGTATCGCCTCCACCATACATT
GATCCATATGAGCTACTGGAAGATGAACGACTCTCTCGACCCTCCCCAGATGTCTTCTAA
GCTTAAGGACACACGAATATGGGAAATATAGATCATGAAAACGTCATACATAGCTCGATA
GTTTTCTTCTTTTACTAGACGTGCTTTTATCTGTAAATGCAAAGCTAGCTATAGACTGTA
ATTATCTAACATTCCCATATAATCTGCGTGATAAAATG