Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0549700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20426260:20432203:1 gene:Os11g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin domain containing protein. (Os11t0549700-01)
Sequence

GGCTACCACGCGCTCCAGTGGGCCACGCTCAACAACTACCCCCACGTCGCGCTCTACATC
ATCGAGCATGGAGGCGACGTCAACGCCGGGGACAATGCGCAGCAGACGGCCCTGCACTGG
GCGGCGGTGCGTGGAGCCATAGCTGCGGCGGACGTGTTGCTGGAGAACGGTGCGAGGGTC
GAGGCGGCCGATGTGAATGGCTACCGGGCAGTTCATGTTGCAGCTCAGTATGGACAAACA
GCATTCTTGCACCACATTATCTCAAAGTACGGTGCAGACTTTGAGTGTTTGGACAATGAT
GGGAGGAGTCCATTGCACTGGGCTGCCTACAAAGGAAATGCTGATACAATTAGGTTACTG
CTGTTTATGGATGCTAATCAAGTAAGGCAAGACAAAAATGGTTGTACTCCATTACACTGG
GCAGCAATAAGAGGAAATTATGAGGTGTGCACTGTTCTTGTACATGCTGGTACCAAGGAG
GAACTCACATTGAAGGATAGCGGTGGGTTTACTCCTGTGGAACTTGCAAACGACAAAGGT
CATCGGCATCTTTCCTATATCCTTTCCAATGCTACAAAAGTAACATTTGAAGACAAGTAC
TGCTCAGGGAGATCGCGGAAGATTGGATATGCTTCTATCCTGTTTTGCTTTCTTATTGTC
CTTATCACCCTTTTTCTGAACTCAATTATTTTTGCACCGAATTTTTCTAGAATAACTGCC
GCTGTTGGTATTTGGTCATGGGGTGCTATTTCTCTTGCCTTTGCTTCATTGGTGATGTTC
TACAGAGTAAGCAGAAAAAATCCAGGCTACATCCAAGCCAATACCAAGCGACTTGATCCA
AAGGAACCACTTATGGAGATTGACCTTAATTCTTCTGCTTGGACAGGCAATTGGTCTCAG
TTATGCCCCACATGCAAGATAATTCGCCCAATGCGCTCCAAACATTGTCCAACTTGTAAG
CACTGTGTTGAGCAGTTTGACCATCACTGTCCTTGGATATCAAATTGTGTTGGAAGGAGA
AATAAGTGGGACTTTTTTGTGTTCCTTTGTATGGGAACAACTACAGCATTTCTGGGCGCT
GCGATTGGGTTCCACAGACTTTGGACAGAGCCCATTATACTCTCATCTTCTGAGTCATGG
ATTAACTTCATGCTGTCAAACCATCCTGGTGCTGTACTGTTCATGTTCATGGATGTCTTT
TTATTGACTGGAGCGCTTATTCTGACAGGAGCACAAGCAACACAGATAGCACGCAATCTC
ACAACTAATGAAGCAGCAAACCAGTCACGCTATGCATATCTTCGGGGGCCTGACGGACGC
TTCAGGAATCCTTACAGTCGAGGATGCCGGAGGAACTGCGCTGATTTTCTTGTAAATGGA
TACAGTAATGACGAGGAGGCTGCATGGCCAACGCTTCAACAAACAGTGCAACGAAGCTAG

Peptide Sequence

PEP ID

Os11t0549700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20426260:20432203:1 gene:Os11g0549700 transcript:Os11t0549700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin domain containing protein. (Os11t0549700-01)
Sequence

GYHALQWATLNNYPHVALYIIEHGGDVNAGDNAQQTALHWAAVRGAIAAADVLLENGARV
EAADVNGYRAVHVAAQYGQTAFLHHIISKYGADFECLDNDGRSPLHWAAYKGNADTIRLL
LFMDANQVRQDKNGCTPLHWAAIRGNYEVCTVLVHAGTKEELTLKDSGGFTPVELANDKG
HRHLSYILSNATKVTFEDKYCSGRSRKIGYASILFCFLIVLITLFLNSIIFAPNFSRITA
AVGIWSWGAISLAFASLVMFYRVSRKNPGYIQANTKRLDPKEPLMEIDLNSSAWTGNWSQ
LCPTCKIIRPMRSKHCPTCKHCVEQFDHHCPWISNCVGRRNKWDFFVFLCMGTTTAFLGA
AIGFHRLWTEPIILSSSESWINFMLSNHPGAVLFMFMDVFLLTGALILTGAQATQIARNL
TTNEAANQSRYAYLRGPDGRFRNPYSRGCRRNCADFLVNGYSNDEEAAWPTLQQTVQRS

Transcript Sequence

Transcript ID

Os11t0549700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20426260:20432203:1 gene:Os11g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin domain containing protein. (Os11t0549700-01)
Sequence

ACGGCTACCACGCGCTCCAGTGGGCCACGCTCAACAACTACCCCCACGTCGCGCTCTACA
TCATCGAGCATGGAGGCGACGTCAACGCCGGGGACAATGCGCAGCAGACGGCCCTGCACT
GGGCGGCGGTGCGTGGAGCCATAGCTGCGGCGGACGTGTTGCTGGAGAACGGTGCGAGGG
TCGAGGCGGCCGATGTGAATGGCTACCGGGCAGTTCATGTTGCAGCTCAGTATGGACAAA
CAGCATTCTTGCACCACATTATCTCAAAGTACGGTGCAGACTTTGAGTGTTTGGACAATG
ATGGGAGGAGTCCATTGCACTGGGCTGCCTACAAAGGAAATGCTGATACAATTAGGTTAC
TGCTGTTTATGGATGCTAATCAAGTAAGGCAAGACAAAAATGGTTGTACTCCATTACACT
GGGCAGCAATAAGAGGAAATTATGAGGTGTGCACTGTTCTTGTACATGCTGGTACCAAGG
AGGAACTCACATTGAAGGATAGCGGTGGGTTTACTCCTGTGGAACTTGCAAACGACAAAG
GTCATCGGCATCTTTCCTATATCCTTTCCAATGCTACAAAAGTAACATTTGAAGACAAGT
ACTGCTCAGGGAGATCGCGGAAGATTGGATATGCTTCTATCCTGTTTTGCTTTCTTATTG
TCCTTATCACCCTTTTTCTGAACTCAATTATTTTTGCACCGAATTTTTCTAGAATAACTG
CCGCTGTTGGTATTTGGTCATGGGGTGCTATTTCTCTTGCCTTTGCTTCATTGGTGATGT
TCTACAGAGTAAGCAGAAAAAATCCAGGCTACATCCAAGCCAATACCAAGCGACTTGATC
CAAAGGAACCACTTATGGAGATTGACCTTAATTCTTCTGCTTGGACAGGCAATTGGTCTC
AGTTATGCCCCACATGCAAGATAATTCGCCCAATGCGCTCCAAACATTGTCCAACTTGTA
AGCACTGTGTTGAGCAGTTTGACCATCACTGTCCTTGGATATCAAATTGTGTTGGAAGGA
GAAATAAGTGGGACTTTTTTGTGTTCCTTTGTATGGGAACAACTACAGCATTTCTGGGCG
CTGCGATTGGGTTCCACAGACTTTGGACAGAGCCCATTATACTCTCATCTTCTGAGTCAT
GGATTAACTTCATGCTGTCAAACCATCCTGGTGCTGTACTGTTCATGTTCATGGATGTCT
TTTTATTGACTGGAGCGCTTATTCTGACAGGAGCACAAGCAACACAGATAGCACGCAATC
TCACAACTAATGAAGCAGCAAACCAGTCACGCTATGCATATCTTCGGGGGCCTGACGGAC
GCTTCAGGAATCCTTACAGTCGAGGATGCCGGAGGAACTGCGCTGATTTTCTTGTAAATG
GATACAGTAATGACGAGGAGGCTGCATGGCCAACGCTTCAACAAACAGTGCAACGAAGCT
AGTCACAAATTTCTGGAGCAAATACCAGTCTTATACAGTCACACAGTTCATAAGATCCAG
GAGAGAAGGTTTGAACAATTTTCTGACTTGGATGGACAACAACAGGTGCGGAAAGCGATC
TCCCCTTTGAGCCACTCTGCTTCATCCAGGTGTTTATACAAGGTTGAGTCATGGGAATGG
TTTGATTTTGTAGATTATGTGTATGTGCTATATATGTATTCTTTTTTGGCGGTTACATCA
CTATTACCATACATATCGTGTTGTATTCGATTTCGAGTGCCAATAGATGAGAAATGCAGG
TTTGAACTTCTGATGTATAATAATCTGTAACATTAGATGCTTTCGTGCAAGTAGACAAAT
ACCCTGAGAAATTTTCACC