Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0549620-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20343336:20349189:-1 gene:Os11g0549620 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 7 description:Similar to Purple acid phosphatase. (Os11t0549620-01)
Sequence

ATGATGATGAGGTGTGGTTGGTCGGCGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGGT
GTGATGGTGGCGTCGCCGGTGGCGGGGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAG
GACGGGTCGCTGGCGGTGCTCGTCGTTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAG
ACGTTGGTTGCCACCCAGATGGGCGTGATCGGGGAGGAGTTGGCTGCCGACTTCATCCTC
TCCACCGGCGACAATTTCTACAACGATGGCCTCACCGGCGACAACGACACGGCCAGCTTC
CAGGAGTCCTTCACCAACATCTACACCGCTGATAGCCTCCAGAAGCCTTGGTACATTGTT
CTCGGCAACCATGACTACACTGGAGATGCCCTCGCACAGCAGAGCCCCGCCATTCGCGCC
GTCGATAGCCGTTGGACCTCCATTAACAAGTCCTTCATCGTCGACTCAGATATCGCGGAG
TTCTTCTTGGTGGACACGGTGCCATTCGTGCAGAAGTATTGGAACGAGAGCAAGTTCGAC
TGGAGACAGGTCGCCCCTCGTGACACCTACCTCTCCACTCTACTCACAGATTTAGGAGAC
GCGATGTCGCAGTCGAATGCGACGTGGAAGATCGTGGTTGGACACCACACCATCAGCAGC
GGCTGCGAGCACGGCAACACCACCGACCTCGTCGCCATGCTCCTCCCTGTCCTCAAGACC
TATGGGGCTGACATGTACATCAACGGCCATGATCATTGTTTGCAGCGCATCACCAGCATT
GACAGCCCACTTGAATTCATCACGAGCGGGGGCGGGTCGAGGGCGTGGGCGGGGAAGTTT
AAGCAAACCTCGGACAAGCTGGAGTTCATCTACGACGGGCAAGGGTTCCTGTCGATGCAG
CTGACGATGGCGGAGGCCAGCTTCGCCTTCTATGACGTCACCGGCGCCGTCCTGTACAGC
TGGCAGCTCGCCAAGTCAACCTCCACCAACTAG

Peptide Sequence

PEP ID

Os11t0549620-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20343336:20349189:-1 gene:Os11g0549620 transcript:Os11t0549620-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 7 description:Similar to Purple acid phosphatase. (Os11t0549620-01)
Sequence

MMMRCGWSAAAVVAVVVMVGVMVASPVAGELARVEHPTKEDGSLAVLVVGDWGRKGQYNQ
TLVATQMGVIGEELAADFILSTGDNFYNDGLTGDNDTASFQESFTNIYTADSLQKPWYIV
LGNHDYTGDALAQQSPAIRAVDSRWTSINKSFIVDSDIAEFFLVDTVPFVQKYWNESKFD
WRQVAPRDTYLSTLLTDLGDAMSQSNATWKIVVGHHTISSGCEHGNTTDLVAMLLPVLKT
YGADMYINGHDHCLQRITSIDSPLEFITSGGGSRAWAGKFKQTSDKLEFIYDGQGFLSMQ
LTMAEASFAFYDVTGAVLYSWQLAKSTSTN

Transcript Sequence

Transcript ID

Os11t0549620-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20343336:20349189:-1 gene:Os11g0549620 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 7 description:Similar to Purple acid phosphatase. (Os11t0549620-01)
Sequence

AAAATTCGAAGTCGATCGCCATCTCCAATTCTCCATCGATCATCTATCTCTCACGATCAT
CTCGCCGGAGCTGTGTAGTGGTGGTGAGGAGGAGAATGATGATGAGGTGTGGTTGGTCGG
CGGCGGCGGTGGTTGCGGTGGTCGTCATGGTTGGTGTGATGGTGGCGTCGCCGGTGGCGG
GGGAGCTAGCTCGGGTGGAGCACCCGACGAAGGAGGACGGGTCGCTGGCGGTGCTCGTCG
TTGGCGACTGGGGGAGGAAGGGGCAGTACAACCAGACGTTGGTTGCCACCCAGATGGGCG
TGATCGGGGAGGAGTTGGCTGCCGACTTCATCCTCTCCACCGGCGACAATTTCTACAACG
ATGGCCTCACCGGCGACAACGACACGGCCAGCTTCCAGGAGTCCTTCACCAACATCTACA
CCGCTGATAGCCTCCAGAAGCCTTGGTACATTGTTCTCGGCAACCATGACTACACTGGAG
ATGCCCTCGCACAGCAGAGCCCCGCCATTCGCGCCGTCGATAGCCGTTGGACCTCCATTA
ACAAGTCCTTCATCGTCGACTCAGATATCGCGGAGTTCTTCTTGGTGGACACGGTGCCAT
TCGTGCAGAAGTATTGGAACGAGAGCAAGTTCGACTGGAGACAGGTCGCCCCTCGTGACA
CCTACCTCTCCACTCTACTCACAGATTTAGGAGACGCGATGTCGCAGTCGAATGCGACGT
GGAAGATCGTGGTTGGACACCACACCATCAGCAGCGGCTGCGAGCACGGCAACACCACCG
ACCTCGTCGCCATGCTCCTCCCTGTCCTCAAGACCTATGGGGCTGACATGTACATCAACG
GCCATGATCATTGTTTGCAGCGCATCACCAGCATTGACAGCCCACTTGAATTCATCACGA
GCGGGGGCGGGTCGAGGGCGTGGGCGGGGAAGTTTAAGCAAACCTCGGACAAGCTGGAGT
TCATCTACGACGGGCAAGGGTTCCTGTCGATGCAGCTGACGATGGCGGAGGCCAGCTTCG
CCTTCTATGACGTCACCGGCGCCGTCCTGTACAGCTGGCAGCTCGCCAAGTCAACCTCCA
CCAACTAGTGATCAAAGTCAACACTTAATTATTGTGTTAATTAGCTGCTTATGTGTGTGA
AATTGGAACAGTCAATGTACTGCTTCAGTTATCGATATATATACTGTGACAAAAGATGCA
CGGTGTATAAATAGTGTGTGTGTTTGTATACGTAAGTATGCAAGAATGTTGCTGTTTGTA
ATTGCATCCTAAGTTCATGGGATAAGTTATAATGGCTATCTAAATGATATTCAGTGTGCG
T