Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0547000-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:20182477:20186313:-1 gene:Os11g0547000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLAVIN-BINDING, KELCH REPEAT, F BOX 1 description:Autonomous floral activator, Promotion of flowering (Os11t0547000-01);Hypothetical conserved gene. (Os11t0547000-02)
Sequence	CTTGACAGAGGGCCTAGAGAAGCTTCTCACATTACTCTGTTGACTCAAACTTGTTTCAGC CGATTCTTACAATTCCGGGATCCACGTGCCCAAAGACGACATCCGCTTGTTGATCCCATG GTTGTTTCAGAGATCCGGCGATGCTTGAATGAGGGAATTGAGTTCCAAGGTGAGCTATTG AATTTTCGGAAGGACGGTGCTCCACTGTACAACAGGCTAAGGCTCATTCCAATGCATGGG GATGATGGTTTTGTGACTCACGTCATTGGAATCCAGTTGTTCTCTGAAGCTAACATTGAT CTTAGCAATGTATCATATCCAGTGTATAAACAACAGTCCAACCACAGACCCAACATTCAA GAGATCAACCCTGCTTCTCATGAACATATTCCTAAGATTCAAAGTTCCGAGTACTGCTGC ATCCTCCAGCTCTCAGATGAAGTTCTGGCGCACAACATATTGTCTCGCTTATCGCCAAGA GATGTTGCATCCATCGGATCAGTCTGCACTAGAATGCATGAGTTGACCAAGAATGATCAC CTGAGAAAGATGGTATGTCAAAACGCGTGGGGAAGAGACGTCACTGTGAGGCTTGAGATG AGCACCAAGATGTTAGGATGGGGTCGTCTTGCAAGAGAGCTTACAACCCTTGAGGCAGCT TCATGGAGGAAGTTTACAGTTGGAGGTCGTGTTGAGCCTTCCCGTTGCAACTTCAGTGCC TGTGCTGTTGGTAATCGCCTTGTCCTGTTTGGAGGTGAAGGAGTCAACATGCAGCCAATG GATGATACCTTTGTGCTCAACCTGGAATCTGCAAAGCCTGAATGGCGCCGTGTCAAAGTT TCAGCTTCTCCACCCGGCCGGTGGGGGCACACTCTCTCATGGCTGAATGGCTCATGGCTA GTGGTCTTTGGAGGCTGTGGACAGCAAGGTTTGCTCAATGATGTCTTTGTCCTTGACCTT GATGCCAAGCAGCCCACCTGGAGGGAGGTTGCAAGCGAGGGCCCACCATTGCCGAGGTCA TGGCACAGTTCATGTACCCTGGATGGATCAAAGCTTGTTGTCTCAGGGGGGTGCACTGAA TCCGGTGTGCTCCTCAGTGACACATTCCTGCTTGACCTCACCAAGGAAAAACCAGCATGG AAGGAGATCCCAACATCCTGGTCACCACCATCCCGCCTCGGCCACACCTTGTCCGTCTTT GGTAAGACCAAACTCTTCATGTTTGGTGGGTTGGCAAAGAGCGGCTCTCTCCGGCTACGC TCCTGTGATGCCTACACTATGGACGCTGGTGAAGACAGCCCACAATGGAGGCAACTGGCG ACAACCGGGTTCCCGAGCATCGGTCCACCTCCGAGGCTCGATCATGTCGCGGTCAGCCTC CCCTGTGGACGGATAATCATATTCGGTGGCTCCATCGCTGGGCTGCACTCGCCCTCACAG CTGTTCCTCCTCGACCCAGCGGAGGAGAAGCCGACATGGAGGATTTTGAACGTCCCTGGC CAGCCACCCAAGTTCGCCTGGGGTCATAGCACATGCGTGGTTGGCGGCACCAGGGTTCTT GTCCTGGGTGGCCACACTGGGGAGGAGTGGATTCTCAATGAGCTCCATGAGCTGTGCCTC GCGAGCAGGCCCGACGAAGATGAGTGA

Peptide Sequence

PEP ID	Os11t0547000-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:20182477:20186313:-1 gene:Os11g0547000 transcript:Os11t0547000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLAVIN-BINDING, KELCH REPEAT, F BOX 1 description:Autonomous floral activator, Promotion of flowering (Os11t0547000-01);Hypothetical conserved gene. (Os11t0547000-02)
Sequence	LDRGPREASHITLLTQTCFSRFLQFRDPRAQRRHPLVDPMVVSEIRRCLNEGIEFQGELL NFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEANIDLSNVSYPVYKQQSNHRPNIQ EINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLSPRDVASIGSVCTRMHELTKNDH LRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLEAASWRKFTVGGRVEPSRCNFSA CAVGNRLVLFGGEGVNMQPMDDTFVLNLESAKPEWRRVKVSASPPGRWGHTLSWLNGSWL VVFGGCGQQGLLNDVFVLDLDAKQPTWREVASEGPPLPRSWHSSCTLDGSKLVVSGGCTE SGVLLSDTFLLDLTKEKPAWKEIPTSWSPPSRLGHTLSVFGKTKLFMFGGLAKSGSLRLR SCDAYTMDAGEDSPQWRQLATTGFPSIGPPPRLDHVAVSLPCGRIIIFGGSIAGLHSPSQ LFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCL ASRPDEDE

Transcript Sequence

Transcript ID	Os11t0547000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20182477:20186313:-1 gene:Os11g0547000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLAVIN-BINDING, KELCH REPEAT, F BOX 1 description:Autonomous floral activator, Promotion of flowering (Os11t0547000-01);Hypothetical conserved gene. (Os11t0547000-02)
Sequence	GATCTAGTTTGGATATATTCATGTTATTGCTAAATTTATGAAATGGCTTTTGAAACAAAT TTTGTGTATGGAAGTTCTATATCGCATATTTGCATTGGACCTTAGAGGCGAACAACGAAA TGTTCATATATTCTTTCTGGCTCTGGGTCATTTTTGTTTTCTGGTGGGAAGAGGCTGGGC AAGCAAGGGTGATGGCTACCCGTTAGATATTTTCCCCTGATATATCTTCTCTTCTCTTGC TCTACTAAAGTAGCCACTTGCACATAGAAAAAGGGATGATGGAAGAATAAACTGTAGCAT ATATTGTGAATATAAAATGAGATGGGTAGGCCATTAATTGGAATATAGCACAGTTGTCTG TAGCATGTGGGTACAAAAATTTACAACAGGGAGCATCACGGTTTTAGCCAGGCCTTTTTA TTTTTTACCACCGGGCTACCAATTAATACTTAGTAACTTTAGTCTTCCATTGGCATATAT CATATTTAGTGGTCGCCTGCTAGTGCTCTAGGAGGATATATTATACTGGATTAGTAAGAC TTTTTCCTCCTCTCTTGGATGGTACTGGAAAATAATTAACTATGAATGTATTCACATGAC AAATTAACATTGAATTTGGACACCAACTGTGAAATTTGATCCGTATTAACAATATGGAAA GCTATTATTGGTGACAACCTTATAAGTGTACTACAGTACTACACCTGCAAGGGTTTTCAG TTGACAAGTAGCTGATTATGGTCAGTTTCAGAATTCGGAACTCAATTTTGAGCATAAATG GAAGTTCTGGATGTAATATGAAGATAAACTTTGAGAAATTTGACTTGGGTTGTAAATGTT TGAACTTGATTTTCGTGCTGTACTGCTTAAGGCTGTCTTCAGGAGGCAAGGTTTACCTCC TGACACGGAAAACAATGTAAGCGATTAGAGCGAGATTAGTTAAGTACTAGCCTAAAAAAA ATTAAAAAATGGATTAATATGATTTTTTTTAAAGCAACTTTCCTATAGGAAAATTTTGCA AAGAACACACCGTTTAGCAGTTTGAAAAGCGTGCGCGCAGAAAACGAGAGATGTGAGTTG GGAAAGAAGGGGAAAGTCTTTTAGGGACTCATTCCGTAAATGTCGTTTTACCATTTTGTG GTGATTTGCTCTAATCGTCCACGTCGAATGGTAAATATTCTTGTGTGCAGTCTGCACAAT TAGCCTCTCTTTTGTCAGATTATGAAAATTCTTGAAAAACAATTTATTGAATTGCTTACA TGATGCAAGAACTTGTCTCTTATATTACATTTTGACATATCATGCCATCACAAACAATTC CAAACATATTAATTTTATTTCCAAAAGATTCATTGGATGAGTTTAGTTAAACCTGTGTTC CATCATAAGTACTCCCTCCTTCCCTAAATGTTTGACACGGTTGACTTTTTTAAACATGTT TGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATGTGTAAAACTATATGTATACATAAA AGTATATTTAACAATAAATCAAATGATAGGAAAAGAATTAATAATTACTTAAATTTTTTG AATAAGACGAACGGTCAAACATTTTTAAAAAAGTCAACGGCGTCAAACATTTTGGGATGG AGGGAGTAGTTTGGACATTCAGCAATCAGCATAAGCTCTAGGCATTGGCTAACATAATTA AGTATTCAATGTAGGGTTTTTTTTTTTTTTTTGCATTTCGACTAAAGTCCAACAAAGCAT AAAAAAAATAGCTGGACTAGTTTCTGCCTAATGTTTAGCAATGTTAGCAATTAGCACTAG GTTAACAGAATACATTTGAAACCAAACAAAAAGCCACATTCTTCTTCGTTGTCTGCGACA AAGCTAATAGACAAATGCATGTTCTCTATGCTTGAATTGCTGTTATTCTACTATCATTTT TCATTTATACGAGTTGTTCAACTGTATCATATTTGCATCAAGCTAACAGTGACATAACTT GACAGAGGGCCTAGAGAAGCTTCTCACATTACTCTGTTGACTCAAACTTGTTTCAGCCGA TTCTTACAATTCCGGGATCCACGTGCCCAAAGACGACATCCGCTTGTTGATCCCATGGTT GTTTCAGAGATCCGGCGATGCTTGAATGAGGGAATTGAGTTCCAAGGTGAGCTATTGAAT TTTCGGAAGGACGGTGCTCCACTGTACAACAGGCTAAGGCTCATTCCAATGCATGGGGAT GATGGTTTTGTGACTCACGTCATTGGAATCCAGTTGTTCTCTGAAGCTAACATTGATCTT AGCAATGTATCATATCCAGTGTATAAACAACAGTCCAACCACAGACCCAACATTCAAGAG ATCAACCCTGCTTCTCATGAACATATTCCTAAGATTCAAAGTTCCGAGTACTGCTGCATC CTCCAGCTCTCAGATGAAGTTCTGGCGCACAACATATTGTCTCGCTTATCGCCAAGAGAT GTTGCATCCATCGGATCAGTCTGCACTAGAATGCATGAGTTGACCAAGAATGATCACCTG AGAAAGATGGTATGTCAAAACGCGTGGGGAAGAGACGTCACTGTGAGGCTTGAGATGAGC ACCAAGATGTTAGGATGGGGTCGTCTTGCAAGAGAGCTTACAACCCTTGAGGCAGCTTCA TGGAGGAAGTTTACAGTTGGAGGTCGTGTTGAGCCTTCCCGTTGCAACTTCAGTGCCTGT GCTGTTGGTAATCGCCTTGTCCTGTTTGGAGGTGAAGGAGTCAACATGCAGCCAATGGAT GATACCTTTGTGCTCAACCTGGAATCTGCAAAGCCTGAATGGCGCCGTGTCAAAGTTTCA GCTTCTCCACCCGGCCGGTGGGGGCACACTCTCTCATGGCTGAATGGCTCATGGCTAGTG GTCTTTGGAGGCTGTGGACAGCAAGGTTTGCTCAATGATGTCTTTGTCCTTGACCTTGAT GCCAAGCAGCCCACCTGGAGGGAGGTTGCAAGCGAGGGCCCACCATTGCCGAGGTCATGG CACAGTTCATGTACCCTGGATGGATCAAAGCTTGTTGTCTCAGGGGGGTGCACTGAATCC GGTGTGCTCCTCAGTGACACATTCCTGCTTGACCTCACCAAGGAAAAACCAGCATGGAAG GAGATCCCAACATCCTGGTCACCACCATCCCGCCTCGGCCACACCTTGTCCGTCTTTGGT AAGACCAAACTCTTCATGTTTGGTGGGTTGGCAAAGAGCGGCTCTCTCCGGCTACGCTCC TGTGATGCCTACACTATGGACGCTGGTGAAGACAGCCCACAATGGAGGCAACTGGCGACA ACCGGGTTCCCGAGCATCGGTCCACCTCCGAGGCTCGATCATGTCGCGGTCAGCCTCCCC TGTGGACGGATAATCATATTCGGTGGCTCCATCGCTGGGCTGCACTCGCCCTCACAGCTG TTCCTCCTCGACCCAGCGGAGGAGAAGCCGACATGGAGGATTTTGAACGTCCCTGGCCAG CCACCCAAGTTCGCCTGGGGTCATAGCACATGCGTGGTTGGCGGCACCAGGGTTCTTGTC CTGGGTGGCCACACTGGGGAGGAGTGGATTCTCAATGAGCTCCATGAGCTGTGCCTCGCG AGCAGGCCCGACGAAGATGAGTGATTCCCAACTCCATTGCTTGTTCTTATTTATTTAGAT CCTATGATTATTACTGATATCTGTTGTTGTCACAACCCTATGTAATAGTAGTAAAAAAGA AACAAAAAGAGGATTACTGGTAGTTTTCATCCTTAGAAGTTAGGAAAAAGATCTGAAAAA AAAGTTATGAAATAAAGGTTTGTTCTAGTTTTTTTTTTTGTTTTCTTCAGTTTGCGC