Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0546900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20178469:20181426:1 gene:Os11g0546900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G-BOX FACTOR 14-3-3D PROTEIN description:Similar to TaWIN1. (Os11t0546900-01)
Sequence

ATGTCGCCGGCGGAGCCGACGAGGGAGGAGAGCGTGTACAAGGCGAAGCTGGCGGAGCAG
GCGGAGCGGTACGAGGAGATGGTGGAGTACATGGAGCGCGTGGCGCGCGCGGCGGGGGGC
GCCTCCGGCGGGGAGGAGCTCACGGTGGAGGAGCGGAACCTGCTGTCCGTGGCGTACAAG
AACGTCATCGGCGCCCGCCGCGCGTCGTGGCGGATCATCTCGTCGATCGAGCAGAAGGAG
GAGGGCCGCGGGAACGACGCCCACGCCGCCACCATCCGCTCCTACAGGGGCAAGATCGAG
GCCGAGCTCGCCCGCATCTGCGACGGCATCCTGGCCCTGCTCGACTCCCACCTCGTCCCC
TCCGCCGGCGCCGCCGAGTCCAAGGTCTTCTACCTCAAGATGAAGGGCGACTACCACAGG
TACCTTGCGGAGTTTAAGTCTGGCGACGAGAGGAAGCAGGCTGCGGAGAGCACCATGAAT
GCATACAAGGCTGCTCAGGACATTGCTCTCGCAGATTTGGCTCCGACCCACCCCATAAGG
CTTGGGCTTGCACTCAACTTTTCAGTGTTCTACTATGAGATCTTGAACTCCCCTGACCGT
GCCTGCAACCTCGCGAAGCAGGCGTTTGATGAGGCCATATCAGAACTGGACAGCCTTGGT
GAAGAATCCTACAAGGACAGCACTTTGATCATGCAGCTCCTGCGTGACAACTTGACTCTG
TGGACTTCAGATGCCAATGATGATGGTGGTGACGAAATCAAGGAAGCCGCAGCTCCAAAA
GAGCCTGGGGATCAGTGA

Peptide Sequence

PEP ID

Os11t0546900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20178469:20181426:1 gene:Os11g0546900 transcript:Os11t0546900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G-BOX FACTOR 14-3-3D PROTEIN description:Similar to TaWIN1. (Os11t0546900-01)
Sequence

MSPAEPTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGGEELTVEERNLLSVAYK
NVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVP
SAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIR
LGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTL
WTSDANDDGGDEIKEAAAPKEPGDQ

Transcript Sequence

Transcript ID

Os11t0546900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20178469:20181426:1 gene:Os11g0546900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G-BOX FACTOR 14-3-3D PROTEIN description:Similar to TaWIN1. (Os11t0546900-01)
Sequence

AGCCGCGTTCGCATCCGCCGCCGCAGCCGCAGCCGCCGCCGCCGACGCCGACGAGGAGAG
GAGGAGAGGGAAGGCGAGAGGGAGGTAGGTAGGTAGGCAGTTAGCCATGTCGCCGGCGGA
GCCGACGAGGGAGGAGAGCGTGTACAAGGCGAAGCTGGCGGAGCAGGCGGAGCGGTACGA
GGAGATGGTGGAGTACATGGAGCGCGTGGCGCGCGCGGCGGGGGGCGCCTCCGGCGGGGA
GGAGCTCACGGTGGAGGAGCGGAACCTGCTGTCCGTGGCGTACAAGAACGTCATCGGCGC
CCGCCGCGCGTCGTGGCGGATCATCTCGTCGATCGAGCAGAAGGAGGAGGGCCGCGGGAA
CGACGCCCACGCCGCCACCATCCGCTCCTACAGGGGCAAGATCGAGGCCGAGCTCGCCCG
CATCTGCGACGGCATCCTGGCCCTGCTCGACTCCCACCTCGTCCCCTCCGCCGGCGCCGC
CGAGTCCAAGGTCTTCTACCTCAAGATGAAGGGCGACTACCACAGGTACCTTGCGGAGTT
TAAGTCTGGCGACGAGAGGAAGCAGGCTGCGGAGAGCACCATGAATGCATACAAGGCTGC
TCAGGACATTGCTCTCGCAGATTTGGCTCCGACCCACCCCATAAGGCTTGGGCTTGCACT
CAACTTTTCAGTGTTCTACTATGAGATCTTGAACTCCCCTGACCGTGCCTGCAACCTCGC
GAAGCAGGCGTTTGATGAGGCCATATCAGAACTGGACAGCCTTGGTGAAGAATCCTACAA
GGACAGCACTTTGATCATGCAGCTCCTGCGTGACAACTTGACTCTGTGGACTTCAGATGC
CAATGATGATGGTGGTGACGAAATCAAGGAAGCCGCAGCTCCAAAAGAGCCTGGGGATCA
GTGAGATGAATTCGGACGCCAGTCTGATGCACCATCTGTTGTTGTTGGGGCAATGGACAT
TGATGTCTTCGGCTTTCAGTAGCTATCTTCTAGTACACGAACTGTCGTCGCACCATCGCG
GAGGAGACGATGATGTTCTTAAATTACTTAAGTAGTTCTGGGTCACGCTTTTGTTCAGTT
GATAAATGATGGCTGGATCCTGGTTTTCTTGTTCCACGATGCCAGCCACAGGAAAAACCC
TACTATTCTGCACTGTTAGAATGCTGTTATATTAACCATGTTTGACAAGACATTTTCAGT
ATGTTTGTATGACCGTCTTGGAAGTGTTTGGTTGAACCTGTCTCAGGGTCTTTGGTCCAA
GACATTATTCACCTGGCTTGCTTAACTCGTTTTAGAG