Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0546300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:20144609:20147897:-1 gene:Os11g0546300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A V description:Patatin family protein. (Os11t0546300-01)
Sequence	ATGGCCTCCTCCCTCCTCTCCTCCGCCGCCTCCGGCCTCCCTCCCAAGCCGCAGCCACCT TCCTCCACCCCTCCCTCCTCCGCCTCCGCGCGGCCGCGGGGCTTCCGTCGCTTCATGCTC GCCCGCGCCGCCGCGGGCCGCGACCCGGAGCCGCCGCCGCTGCCCGAGGGGACCGAGAAG AGGTCGCTCGCGGTGAGGACGGGGGAGGTGTTCCTGGGGCTGGCGGCGCTGCTGGTGCGC GCGGGGAGGGGCGGGGGGGCGGCGGTGGAGGAGGTGGAGGCGAAGGACGGGGTGGTGTGG GAGCAGCGGCCCGAGGACGTGGAGGCGGAGCGGCGGCGGCGGGAGCTGACCGGCCCCGGG TTCAGCTTCTCCGCCGCCGGGCTGCTCTTCCCCTACCACATCGGCGTCGCGCAGTGCCTC ATCGACAGGGGCTACCTCACGGAAAGAACTCCGTTAGCTGGTTCATCAGCTGGTGCCATA ATCTGTGCAGTGATTGCATCTGGGAACACGATGCGAGATGCTTTGCAAGTGACCAAGGAT CTAGCTGATAACTGTCGGAGCAATGGGACAGCCTTTCGCCTTGGGGCTGTACTCAAGGAT GTTCTAGACAGGTTTCTCCCAGATGATGTGCACATTAGGTGCAACGGAAGGATCCGTGTT GCTATTACTCAGCTGTCCTGGAGGCCTAGGGGCTTACTGGTTGACCAATTTGACTCAAAA GATGATGTAATCAGTGCAGTTATTACATCCTCTTTTATTCCTGGATATTTAGCTCCCAGG CCTGCAACTTTCTTCCGGAACAGGCTGTGCATTGATGGGGGCCTTACGTTGTTTATGCCA CCAACTTCTGCTTCCGAAACAGTTCGAATTTGTGCTTTCCCAGCCAGTCGACTAGGATTG CAAGGGATTGGTATTAGTCCAGACTGCAATCCGGAGAACAGAGCTAGCCCCCGACAGCTG TTTAACTGGGCTCTGGAACCCGCCGAAGACGAGGTTCTAGACAAATTATATGAGCTTGGG TATCTGGATGCAGCTGTATGGGCTGACCAGAATCAAGTTGAGTTGATTGTGAAGAATGAA CAGCCACTCCGCGTCACAGATTGA

Peptide Sequence

PEP ID	Os11t0546300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:20144609:20147897:-1 gene:Os11g0546300 transcript:Os11t0546300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A V description:Patatin family protein. (Os11t0546300-01)
Sequence	MASSLLSSAASGLPPKPQPPSSTPPSSASARPRGFRRFMLARAAAGRDPEPPPLPEGTEK RSLAVRTGEVFLGLAALLVRAGRGGGAAVEEVEAKDGVVWEQRPEDVEAERRRRELTGPG FSFSAAGLLFPYHIGVAQCLIDRGYLTERTPLAGSSAGAIICAVIASGNTMRDALQVTKD LADNCRSNGTAFRLGAVLKDVLDRFLPDDVHIRCNGRIRVAITQLSWRPRGLLVDQFDSK DDVISAVITSSFIPGYLAPRPATFFRNRLCIDGGLTLFMPPTSASETVRICAFPASRLGL QGIGISPDCNPENRASPRQLFNWALEPAEDEVLDKLYELGYLDAAVWADQNQVELIVKNE QPLRVTD

Transcript Sequence

Transcript ID	Os11t0546300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20144609:20147897:-1 gene:Os11g0546300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A V description:Patatin family protein. (Os11t0546300-01)
Sequence	ACACGTGTCGTCGTCGGCGGCCGCCGGCGAGCCCCCATGGCCTCCTCCCTCCTCTCCTCC GCCGCCTCCGGCCTCCCTCCCAAGCCGCAGCCACCTTCCTCCACCCCTCCCTCCTCCGCC TCCGCGCGGCCGCGGGGCTTCCGTCGCTTCATGCTCGCCCGCGCCGCCGCGGGCCGCGAC CCGGAGCCGCCGCCGCTGCCCGAGGGGACCGAGAAGAGGTCGCTCGCGGTGAGGACGGGG GAGGTGTTCCTGGGGCTGGCGGCGCTGCTGGTGCGCGCGGGGAGGGGCGGGGGGGCGGCG GTGGAGGAGGTGGAGGCGAAGGACGGGGTGGTGTGGGAGCAGCGGCCCGAGGACGTGGAG GCGGAGCGGCGGCGGCGGGAGCTGACCGGCCCCGGGTTCAGCTTCTCCGCCGCCGGGCTG CTCTTCCCCTACCACATCGGCGTCGCGCAGTGCCTCATCGACAGGGGCTACCTCACGGAA AGAACTCCGTTAGCTGGTTCATCAGCTGGTGCCATAATCTGTGCAGTGATTGCATCTGGG AACACGATGCGAGATGCTTTGCAAGTGACCAAGGATCTAGCTGATAACTGTCGGAGCAAT GGGACAGCCTTTCGCCTTGGGGCTGTACTCAAGGATGTTCTAGACAGGTTTCTCCCAGAT GATGTGCACATTAGGTGCAACGGAAGGATCCGTGTTGCTATTACTCAGCTGTCCTGGAGG CCTAGGGGCTTACTGGTTGACCAATTTGACTCAAAAGATGATGTAATCAGTGCAGTTATT ACATCCTCTTTTATTCCTGGATATTTAGCTCCCAGGCCTGCAACTTTCTTCCGGAACAGG CTGTGCATTGATGGGGGCCTTACGTTGTTTATGCCACCAACTTCTGCTTCCGAAACAGTT CGAATTTGTGCTTTCCCAGCCAGTCGACTAGGATTGCAAGGGATTGGTATTAGTCCAGAC TGCAATCCGGAGAACAGAGCTAGCCCCCGACAGCTGTTTAACTGGGCTCTGGAACCCGCC GAAGACGAGGTTCTAGACAAATTATATGAGCTTGGGTATCTGGATGCAGCTGTATGGGCT GACCAGAATCAAGTTGAGTTGATTGTGAAGAATGAACAGCCACTCCGCGTCACAGATTGA GAAGACACCAACAAGAAGACCCTGAGTTCTTGAACCTAACAGTATTTGGTTTGCTCAAAA GCTAACATCTGAATCTGTTTGCCCCAGCTGTGCTCAGAAGTCTCTCACGTACAACTGCAT CAGCTGTATTTCTTTTCCCAAATTTTGCCAGCTCTAGGTTACCAGTTCAATACTACAATG GTTTGTAAAGTGTGACTGCTGCAACCACACGAGAGCTTTACTATGCTACTCGTTGCCTTG ATTTTGCAGTAAATATTGTTTTGTCCTCC