Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0545000-03
CDS Infomation	cds chromosome:IRGSP-1.0:11:20045013:20048940:-1 gene:Os11g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOP5, N-terminal domain containing protein. (Os11t0545000-01);Conserved hypothetical protein. (Os11t0545000-02);NOP5, N-terminal domain containing protein. (Os11t0545000-03)
Sequence	ATGCCCAAGCGGCGTCGCGGGGTTCGCCCCCCTCCTCCCGATCCTTCCCCGGCTCCGGCG ACAATCGACTATAGCCTTACTTATAAGGAGATAGCCGCCAGTGGGGCTCCAGGTGCTGTG GACTTTGTGAAGAATCATGGCTTGTACTTGCTGCTGCTTGAGACACCCTCTGGCTTCTCA ATTTTCTCTCTTTGTGGGGTCTACATCCACTTACCAGATGCGATACAAAATATTTGGGCG ATGTTCGGTACTTACAGGTCTTCACATGACGTTATCTGGCTGAAGGAATTTCAGAAATTT GATGACAAGTCTAGCGCCATTAATGTTGATACTGGTGTTAACAAACAGCTTACTGAGATG ATCATGAAGTGGCGTCGCCCTAGGCAGAAATTGGTTGTTGGAAAGCCGGAGTATAAATCA ATCATTGAAAATACCTTAGGAATACCCTGCCTGTGTGATGAAGTTGTGATGGACGTAATG TGGGCCATGAAGCGTCTCATTCGCTATTTTGTGCCCACTGAAACACCCGAGCTGGCTGAA GAGGACAGCCTCACTATGAGTCAAGGACTACGGATGTTTTTAAGTCGTTATGGCTTTGAA ATCAAACCAGAGATGGTCTACAACGATATTGTTCGTGCTGCATCCATCGTGTTTAGGTGT GATGCTGTTGAGGACCTTTACGAGCACTTGCAACATCTTGGTCGCCACCTCAAGAATGTG TCTGGCATTGACTATGAGAATTGGGGCACTGTGAAACTCGCGACAGCTTTTAAGATCATA TGCAGCCGCAAAATTGATAAATCTGATGAGATGTTTTCAGACGACGTGCGATCGAAGTTG CTGGATGATGCAGATAAATACAAAGATCTTGTTTTTTCGACAGGTTGCATTGCAAACTAT AAAAAAATTTTAGGTCTCAATATACTCAGGAATGATAAAATGGATCAATTGGCTGAGTTG GTTAAGGTAGCTAGGATTAAAGCTGAACACGTGAGGGTGCCTGAGAATGTGCCTGAGAAC TAA

Peptide Sequence

PEP ID	Os11t0545000-03
PEP Infomation	pep chromosome:IRGSP-1.0:11:20045013:20048940:-1 gene:Os11g0545000 transcript:Os11t0545000-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOP5, N-terminal domain containing protein. (Os11t0545000-01);Conserved hypothetical protein. (Os11t0545000-02);NOP5, N-terminal domain containing protein. (Os11t0545000-03)
Sequence	MPKRRRGVRPPPPDPSPAPATIDYSLTYKEIAASGAPGAVDFVKNHGLYLLLLETPSGFS IFSLCGVYIHLPDAIQNIWAMFGTYRSSHDVIWLKEFQKFDDKSSAINVDTGVNKQLTEM IMKWRRPRQKLVVGKPEYKSIIENTLGIPCLCDEVVMDVMWAMKRLIRYFVPTETPELAE EDSLTMSQGLRMFLSRYGFEIKPEMVYNDIVRAASIVFRCDAVEDLYEHLQHLGRHLKNV SGIDYENWGTVKLATAFKIICSRKIDKSDEMFSDDVRSKLLDDADKYKDLVFSTGCIANY KKILGLNILRNDKMDQLAELVKVARIKAEHVRVPENVPEN

Transcript Sequence

Transcript ID	Os11t0545000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20045013:20048940:-1 gene:Os11g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOP5, N-terminal domain containing protein. (Os11t0545000-01);Conserved hypothetical protein. (Os11t0545000-02);NOP5, N-terminal domain containing protein. (Os11t0545000-03)
Sequence	AAGACGCGCGTCCGCCGCCGCAACTAGCAATGCCCAAGCGGCGTCGCGGGGTTCGCCCCC CTCCTCCCGATCCTTCCCCGGCTCCGGCGACAATCGACTATAGCCTTACTTATAAGGAGA TAGCCGCCAGTGGGGCTCCAGGTGCTGTGGACTTTGTGAAGAATCATGGCTTGTACTTGC TGCTGCTTGAGACACCCTCTGGCTTCTCAATTTTCTCTCTTTGTGGGGTCTACATCCACT TACCAGATGCGATACAAAATATTTGGGCGATGTTCGGTACTTACAGGTCTTCACATGACG TTATCTGGCTGAAGGAATTTCAGAAATTTGATGACAAGTCTAGCGCCATTAATGTTGATA CTGGTGTTAACAAACAGCTTACTGAGATGATCATGAAGTGGCGTCGCCCTAGGCAGAAAT TGGTTGTTGGAAAGCCGGAGTATAAATCAATCATTGAAAATACCTTAGGAATACCCTGCC TGTGTGATGAAGTTGTGATGGACGTAATGTGGGCCATGAAGCGTCTCATTCGCTATTTTG TGCCCACTGAAACACCCGAGCTGGCTGAAGAGGACAGCCTCACTATGAGTCAAGGACTAC GGATGTTTTTAAGTCGTTATGGCTTTGAAATCAAACCAGAGATGGTCTACAACGATATTG TTCGTGCTGCATCCATCGTGTTTAGGTGTGATGCTGTTGAGGACCTTTACGAGCACTTGC AACATCTTGGTCGCCACCTCAAGAATGTGTCTGGCATTGACTATGAGAATTGGGGCACTG TGAAACTCGCGACAGCTTTTAAGATCATATGCAGCCGCAAAATTGATAAATCTGATGAGA TGTTTTCAGACGACGTGCGATCGAAGTTGCTGGATGATGCAGATAAATACAAAGATCTTG TTTTTTCGACAGGTTGCATTGCAAACTATAAAAAAATTTTAGGTCTCAATATACTCAGGA ATGATAAAATGGATCAATTGGCTGAGTTGGTTAAGGTAGCTAGGATTAAAGCTGAACACG TGAGGGTGCCTGAGAATGTGCCTGAGAACTAAGATCACTACAAGCTTGCTCAATATCTCG CTGAACCTCTTGCAGGCTAAATAATTTGGTTTGCCAGTTAGGAAGCGTTTGGTATGCATG TGGCTTAATCCAGATTCTTCTGAGTGTCGAGGTTGTGATCTCGGTTGGCTTAAACATTAT TGTGCATCTTTTGTAAATCTAGTCTGGTATTTGAGAAGCTAAGGTCCGTGCTATCCAAAA CTTTGCATCGTTTAGCTGTCAAACAAATGACCGTGCTCAGTGGTGATTAACGTGCTCTGT GATGAATGACGATCTTGATTTGATT