Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0544700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:20026021:20029518:1 gene:Os11g0544700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DR1 ASSOCIATED PROTEIN 1 description:Repressor protein. (Os11t0544700-01)
Sequence

ATGAGGAAGAAGCTGGGCACCCGCTTCCCCGCGGCACGGATCAAAAAGATCATGCAGGCT
GATGAGGACGTTGGCAAGATTGCACTAGCTGTACCTGTTTTAGTATCGAGGGCCCTTGAA
TTGTTTTTGCAAGATTTAATTGACCGAACTTACGAAATTACACTGCAAAGTGGTGCAAAG
ACATTGAATTCCTTCCACCTAAAGCAATGTGTGAGGAGGTACAGTTCTTTTGACTTCCTA
ACTGAGGTTGTCAACAAGGTACCGGACCTCGGTGGCGCTGACTCATGTGGAGATGATAGA
GCATTACCCAGAAGAAGAAAAGCCTTGCCAAATGGAAGTGACCCAGAGAATGAGGAATCT
CGATCAAGCAAAATGGCCGTAAGAAGTGCAAATATCAGTCCCAGAGGACGTGGGAGAGGT
CGAGGTAGAGGGCGAGGACGACCACCCACCAAGCGGAAGGAAGTTGGTTATGTACAATTT
GAGGATGAGAGCAGCATGTTTGCTGATCAGGGCGAAGCCTTACCAGGAGAGGAGACGGTT
CCAGAGACCATCCATGGCACCGAGAGCGTACCTCCAAGCACACACCCTCCAGCAGAAGCC
CCATCGGCAGCAGAGATACCAGCTCCAAATCCAAAGGTGGAAGAAGCGAAAAACGACGAC
CATCAGCCGGATTGGCCTATGCCAGATGCGATTGGAAACATCGGTGTCGGACCATCCGGT
TTTGGACATCTTACGGTGCAAGTTGACGAGGATGAGGACTACGACAACGAGGATTAG

Peptide Sequence

PEP ID

Os11t0544700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:20026021:20029518:1 gene:Os11g0544700 transcript:Os11t0544700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DR1 ASSOCIATED PROTEIN 1 description:Repressor protein. (Os11t0544700-01)
Sequence

MRKKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRTYEITLQSGAK
TLNSFHLKQCVRRYSSFDFLTEVVNKVPDLGGADSCGDDRALPRRRKALPNGSDPENEES
RSSKMAVRSANISPRGRGRGRGRGRGRPPTKRKEVGYVQFEDESSMFADQGEALPGEETV
PETIHGTESVPPSTHPPAEAPSAAEIPAPNPKVEEAKNDDHQPDWPMPDAIGNIGVGPSG
FGHLTVQVDEDEDYDNED

Transcript Sequence

Transcript ID

Os11t0544700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20026021:20029518:1 gene:Os11g0544700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DR1 ASSOCIATED PROTEIN 1 description:Repressor protein. (Os11t0544700-01)
Sequence

GTGGAGGAGCGGAGGCGGAGGCGAACGCGAGGAGGAAGACGAAGATGAGGAAGAAGCTGG
GCACCCGCTTCCCCGCGGCACGGATCAAAAAGATCATGCAGGCTGATGAGGACGTTGGCA
AGATTGCACTAGCTGTACCTGTTTTAGTATCGAGGGCCCTTGAATTGTTTTTGCAAGATT
TAATTGACCGAACTTACGAAATTACACTGCAAAGTGGTGCAAAGACATTGAATTCCTTCC
ACCTAAAGCAATGTGTGAGGAGGTACAGTTCTTTTGACTTCCTAACTGAGGTTGTCAACA
AGGTACCGGACCTCGGTGGCGCTGACTCATGTGGAGATGATAGAGCATTACCCAGAAGAA
GAAAAGCCTTGCCAAATGGAAGTGACCCAGAGAATGAGGAATCTCGATCAAGCAAAATGG
CCGTAAGAAGTGCAAATATCAGTCCCAGAGGACGTGGGAGAGGTCGAGGTAGAGGGCGAG
GACGACCACCCACCAAGCGGAAGGAAGTTGGTTATGTACAATTTGAGGATGAGAGCAGCA
TGTTTGCTGATCAGGGCGAAGCCTTACCAGGAGAGGAGACGGTTCCAGAGACCATCCATG
GCACCGAGAGCGTACCTCCAAGCACACACCCTCCAGCAGAAGCCCCATCGGCAGCAGAGA
TACCAGCTCCAAATCCAAAGGTGGAAGAAGCGAAAAACGACGACCATCAGCCGGATTGGC
CTATGCCAGATGCGATTGGAAACATCGGTGTCGGACCATCCGGTTTTGGACATCTTACGG
TGCAAGTTGACGAGGATGAGGACTACGACAACGAGGATTAGCCACGGCCATCTTCTGATT
GTTATGCACTAACAGGGCAGTTCTCCTGGTGTTGTAAAATGTAAATATGTAGCTGCAGCT
AGCTGTGATGTGCTGCTGATGTAATGCAGTATGTAGTTGTCCCGTGTAACTTTGTCTGTT
TTCCAATAATTGCTTGCTAGTTGCCTCACATTGTTGACATGATTGACTACTGAAGTGTTT
TGTCAGAATTAACCCGGTATTGAAGC