Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0544600-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:20018265:20023695:1 gene:Os11g0544600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone chaperone domain CHZ domain containing protein. (Os11t0544600-01);Hypothetical conserved gene. (Os11t0544600-02)
Sequence

ATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCGAGAAG
GCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCGAAGGT
GTAAGGAGAGCACTGGAGAAGGACATGGGCTTGGAGAAACATTCACTTGACGCCCATAAA
AAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATACGAAT
AATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAATCAGAA
GATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGGTGGCA
AAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCAGTGAC
ATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAGAGAAC
TCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGCTTCAG
AAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTCTTCAA
GAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTGGCCAG
AAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAAATGAT
AGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGGCCAAAAAAGAAAAAGGCTGAA
AAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAAATTCA
AAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGAA
GAAGATAATTCAAATTCATCAGCTGAAGAAGATAATAAGAAAAAACGACAAGTAGCTCCA
GCTTACGGGAAACGGGTGGAACGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATC
GCACCTACTGTGTATCGGAAGGCAAAGATGGCTCCTGAGAGCAAGCGTGAAGCCTGTTTG
ATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAAA
G

Peptide Sequence

PEP ID

Os11t0544600-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:20018265:20023695:1 gene:Os11g0544600 transcript:Os11t0544600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone chaperone domain CHZ domain containing protein. (Os11t0544600-01);Hypothetical conserved gene. (Os11t0544600-02)
Sequence

MEPDAAAAAAAGEREAEIEKAFRARLPDFRKQADSLTLEGVRRALEKDMGLEKHSLDAHK
KFIKQCVDKVFSGSDDDNTNNNAPEKDEAKDDRSSKEESEDAQPTSDSNKISSNADEPVA
KSSETDRDQEGDKDHSSGSDISEATIKNAIVKRASYFRENSETITLQGVRRTLEEDLKLQ
KKALDAYKSFISTELDNILQEPANGTKKTSKTESHKDSGQKTSKNSKRARQDSDTSEIND
SHCERGDSDEDARPKKKKAEKGKAVKRQKKTTVEKQLSNSKAKKVAKKDLDKSKERSGSE
EDNSNSSAEEDNKKKRQVAPAYGKRVERLKSIIKSCGMSIAPTVYRKAKMAPESKREACL
IKELEDILEKEGLSTNPSEK

Transcript Sequence

Transcript ID

Os11t0544600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:20018265:20023695:1 gene:Os11g0544600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone chaperone domain CHZ domain containing protein. (Os11t0544600-01);Hypothetical conserved gene. (Os11t0544600-02)
Sequence

ATTTTCGTCCACGCCGAGACGAGACGAGACAGTCGGGCGACGGGACAGCAGCTGCAGCCT
GCACTGCAGCACAGCCGTCAGCCGCCTCCCCAACCTCCCGCCGCCGCCGCCGCCGCCGCA
TCCGCATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCG
AGAAGGCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCG
AAGGTGTAAGGAGAGCACTGGAGAAGGACATGGGCTTGGAGAAACATTCACTTGACGCCC
ATAAAAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATA
CGAATAATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAAT
CAGAAGATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGG
TGGCAAAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCA
GTGACATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAG
AGAACTCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGC
TTCAGAAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTC
TTCAAGAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTG
GCCAGAAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAA
ATGATAGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGGCCAAAAAAGAAAAAGG
CTGAAAAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAA
ATTCAAAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGAT
CAGAAGAAGATAATTCAAATTCATCAGCTGAAGAAGATAATAAGAAAAAACGACAAGTAG
CTCCAGCTTACGGGAAACGGGTGGAACGGCTGAAGTCAATAATCAAATCTTGTGGAATGA
GTATCGCACCTACTGTGTATCGGAAGGCAAAGATGGCTCCTGAGAGCAAGCGTGAAGCCT
GTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTG
AAAAAG