Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0544500-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:20008561:20013324:-1 gene:Os11g0544500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os11t0544500-01);Uncharacterised protein family UPF0016 domain containing protein. (Os11t0544500-02)
Sequence	ATGGCAACGGCCATTTCCGTCGGCGTCGCAGTGCCAGCCGCCAGCAGGAGGCGCGAGGAT GGGGCAGGGCCGCCGCTGCTTCTGCGGCGGCGGTGCCTCGTGGAAGGACAAGTGAGATGT AGGTTACCATGGTTGAGACCAATACGGCACAATGTTAGAGTGCAGACATCCAATGTAAAT GTTGGAGCTGGAAGCTATGAAGGTGGCGAAGCAGGTAGCCATGGGGAACATTTGGATAGT TCTGCTACCAGAGATTCAAACAAACCAACAAAACCACCTTCAGGATCTCGTTACCCTCAA TCCATTGCTGCAGTGCTACTTCTATGTGCTCTGGCATCCGCTTTTATTGTTTTCTTTAAA GGACAACCATCTGCAGTTGTAGCGATGCTTGCAAAGTCAGGTTTCACGGCAGCATTTACA CTGATTTTTGTATCTGAGATTGGGGATAAGACATTTTTCATTGCTGCACTTCTTGCGATG CAATATCAGAGAGCATTGGTTTTACTTGGGTCAATGGCTGCTCTTTCCCTAATGACTATT GTGAGTGTTATAATTGGAAGGATTTTTCAGTCTGTACCAGCACAATTTCAAACAACACTA CCTATAGGAGAGTATGCTGCGATTGCTCTCCTGGCATTTTTTGGTTTCAAGTCAATAAAA GATGCATGGCAACTTCCAGATAATGCAAATGGAAACCTTCAGGGAAACTCTGAATCTGGG GAGCTGGCTGAGGCTGAGGAGCTTGTCAAGGAGAAGGTGGCTAAAAAGTTGACTAGTCCT CTTGAGGTCCTTTGGAAGTCTTTCAGCCTTGTTTTCTTTGCAGAATGGGGAGATCGCTCT ATGCTGGCTACAATTGCGTTAGGTGCTGCTCAGTCTCCTTTTGGTGTCGCAAGCGGAGCC ATAGCTGGACACTTGGTTGCAACTTTCCTTGCAATTGTTGGGGGAGCATTCCTTGCCAAC TACCTATCTGAGAAGCTGGTTGGCCTGATAGGAGGAGTACTTTTTTTGCTGTTTGCTGTT GCCACATTTTTTGGTGTATTCTAA

Peptide Sequence

PEP ID	Os11t0544500-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:20008561:20013324:-1 gene:Os11g0544500 transcript:Os11t0544500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os11t0544500-01);Uncharacterised protein family UPF0016 domain containing protein. (Os11t0544500-02)
Sequence	MATAISVGVAVPAASRRREDGAGPPLLLRRRCLVEGQVRCRLPWLRPIRHNVRVQTSNVN VGAGSYEGGEAGSHGEHLDSSATRDSNKPTKPPSGSRYPQSIAAVLLLCALASAFIVFFK GQPSAVVAMLAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTI VSVIIGRIFQSVPAQFQTTLPIGEYAAIALLAFFGFKSIKDAWQLPDNANGNLQGNSESG ELAEAEELVKEKVAKKLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGA IAGHLVATFLAIVGGAFLANYLSEKLVGLIGGVLFLLFAVATFFGVF

Transcript Sequence

Transcript ID	Os11t0544500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20008561:20013324:-1 gene:Os11g0544500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os11t0544500-01);Uncharacterised protein family UPF0016 domain containing protein. (Os11t0544500-02)
Sequence	ACGTGTGCGCTACCGAACTCCCGAAGCCGATAAGCCGCCCGCCTCCTCTCCTTCTCGTCG CCGTCGCCGGCGCCGGCTCAGCGCCTCCGCCCTCTCCCCCCACGCCGCCGCCTCCCCCTT CACCCTCTACCCCCACCGCGGGCGCCTCCCCTCCCACTGCCGCCGCCTCCTCCTGCTCCT CCTCCTCCACGTCACCGACGCCGGAGCTTCTTCGATCCATGGCAACGGCCATTTCCGTCG GCGTCGCAGTGCCAGCCGCCAGCAGGAGGCGCGAGGATGGGGCAGGGCCGCCGCTGCTTC TGCGGCGGCGGTGCCTCGTGGAAGGACAAGTGAGATGTAGGTTACCATGGTTGAGACCAA TACGGCACAATGTTAGAGTGCAGACATCCAATGTAAATGTTGGAGCTGGAAGCTATGAAG GTGGCGAAGCAGGTAGCCATGGGGAACATTTGGATAGTTCTGCTACCAGAGATTCAAACA AACCAACAAAACCACCTTCAGGATCTCGTTACCCTCAATCCATTGCTGCAGTGCTACTTC TATGTGCTCTGGCATCCGCTTTTATTGTTTTCTTTAAAGGACAACCATCTGCAGTTGTAG CGATGCTTGCAAAGTCAGGTTTCACGGCAGCATTTACACTGATTTTTGTATCTGAGATTG GGGATAAGACATTTTTCATTGCTGCACTTCTTGCGATGCAATATCAGAGAGCATTGGTTT TACTTGGGTCAATGGCTGCTCTTTCCCTAATGACTATTGTGAGTGTTATAATTGGAAGGA TTTTTCAGTCTGTACCAGCACAATTTCAAACAACACTACCTATAGGAGAGTATGCTGCGA TTGCTCTCCTGGCATTTTTTGGTTTCAAGTCAATAAAAGATGCATGGCAACTTCCAGATA ATGCAAATGGAAACCTTCAGGGAAACTCTGAATCTGGGGAGCTGGCTGAGGCTGAGGAGC TTGTCAAGGAGAAGGTGGCTAAAAAGTTGACTAGTCCTCTTGAGGTCCTTTGGAAGTCTT TCAGCCTTGTTTTCTTTGCAGAATGGGGAGATCGCTCTATGCTGGCTACAATTGCGTTAG GTGCTGCTCAGTCTCCTTTTGGTGTCGCAAGCGGAGCCATAGCTGGACACTTGGTTGCAA CTTTCCTTGCAATTGTTGGGGGAGCATTCCTTGCCAACTACCTATCTGAGAAGCTGGTTG GCCTGATAGGAGGAGTACTTTTTTTGCTGTTTGCTGTTGCCACATTTTTTGGTGTATTCT AATATCTGAAGAATTTGTAGCTTGTAAAGGATTCTGTAGGTCAATTTAATCCTATTTTAA GGTTTTAAGGGCAAAACTGGGCCTTGTCCTTGTTGTTTGTAACTAGTAGGCATTATCCTC CTTTTCAGGAGCGATTCCTTTACTATTGGAAAACAAATTGACGTGAACACAATCAACACA CACGCAAGCTGAGCTGCAGCACGCAAACTATCAGCTATATGCCCTAGAGAGACGAATTGT ATCATATACTATAGAGTATATACTATGTTTATAATGAAATGAATAAAGTATTATTCTGTT TTGT