Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0544300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:20002692:20005365:-1 gene:Os11g0544300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os11t0544300-01)
Sequence	ATGCTTGTTCCGGCCGTTCGGGACACCATGCGCACCACGTGTTTGCGGGATTGCCTAGCC GAGCTGCTCCGCTGCGGGGGCCAGCGCCAGGGCCAGGGCCGATTCTGCTGCCCCGCACAG TTATCTCTCGCCCGGGGGATGACGCAGAGCCGCAGCGTGAGGCAACGGAGCAAGAAGAAG CGGGTGCACGCGCTCGAGGTGGCCACGGAGCGGTGGAAGGTACTCACCAAGGTGCTCGCC GTCATCGACACGCTCAAGAAGGAGGAGGAGCACGTCACCCCGCTCAAGCGCCTTGAGATC CTGCGCTCACAGCTCGGGCTCACCAAGCCCAACAAGGTGGCCCACTTCGTGCGCCGCTCG CCGCAGCTCTTCGAGGTCTGCCGCGACAGCCGAGGCGTCATGTGGGCGGGCCTCTCGCCG CAGGCCGAGGCGCTCGTCGAGGAGGAGGCACGCCTGCTGGAGGATCACTCACGCACGGCC GCTGAGTACGTCACCAGGCTGCTGATGATTTCGGTGGACCGTCGTCTGGCCATCGACAAG ATTGCACATTTCAGGCGCGACATGGGGCTTCCTCATGATTTCAAGACACGATGGGTTCAC ATGTTCCCTGAGCAGTTCAGGGTGGTCAGGTTGGAGGACGGCGATTACCTGGAGCTTGTC TCTTGGAATCCAAACTGGGCAGTCACCGAGCTCGAGAAAAAGACGGCAGCATTGACTGGT GATGCAAATGCTAATGACATTGCCAGTCCACCAGGAGAGCTCTCACTATCATTCCCCATG AAGTTCCCACCAAATTTTACAAGTTACTACAAATTCCGCGGAAAAGTTCATCATTATGTG AAAAAAGGCAATACTGAGCAGTTTCAGAAGACAACATACCTATCTCCTTATGCAGAACCA GGAGGATTGACTCCTGGCTCGCCGGAGTTTGACAAGAGGGCAGTTGCAGTGATGCATGAG ATACTGAACTTCACGTTGGAAAAGAGGCTGGTGACTGATCACCTCACACATTTCCGTCGT GAGTTTGTTATGCCGCAGAAGTTGATGAGACTGCTTCTGAAGCATTATGGCATCTTTTAT GTCTCTGAGAGGGGGAAGCGGTTTAGCGTATTCTTGACGGAGTCTTATGATGGGACAGAA TTAATAGAGAAGTGCCCATTGGTGAGGTGGAAGGAAAAAGTCCTTCAACTTACCAGCTAT AGAGGGAGGATCAAGAATCTTGGTAAATTTGCCGAGTTGTCTGATTCAGAGGACTATTTG TTTGGTAATGATGATAGTAGCGGTGCTACTGATTCTATATTGGATGTCAAAAGTGAAGAT TCGGATGATATCATGGATGATGGCGCTCTTGCAGATGATACTGAGATGGATGTAGGGGAT CTAAGTGATTGTTGCATAGAGTGA

Peptide Sequence

PEP ID	Os11t0544300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:20002692:20005365:-1 gene:Os11g0544300 transcript:Os11t0544300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os11t0544300-01)
Sequence	MLVPAVRDTMRTTCLRDCLAELLRCGGQRQGQGRFCCPAQLSLARGMTQSRSVRQRSKKK RVHALEVATERWKVLTKVLAVIDTLKKEEEHVTPLKRLEILRSQLGLTKPNKVAHFVRRS PQLFEVCRDSRGVMWAGLSPQAEALVEEEARLLEDHSRTAAEYVTRLLMISVDRRLAIDK IAHFRRDMGLPHDFKTRWVHMFPEQFRVVRLEDGDYLELVSWNPNWAVTELEKKTAALTG DANANDIASPPGELSLSFPMKFPPNFTSYYKFRGKVHHYVKKGNTEQFQKTTYLSPYAEP GGLTPGSPEFDKRAVAVMHEILNFTLEKRLVTDHLTHFRREFVMPQKLMRLLLKHYGIFY VSERGKRFSVFLTESYDGTELIEKCPLVRWKEKVLQLTSYRGRIKNLGKFAELSDSEDYL FGNDDSSGATDSILDVKSEDSDDIMDDGALADDTEMDVGDLSDCCIE

Transcript Sequence

Transcript ID	Os11t0544300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:20002692:20005365:-1 gene:Os11g0544300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os11t0544300-01)
Sequence	CGGACGGCCGCCGCTCCGCTTGTGTCTCATCTCCGCCGCCCCTCGCCTCCTCGTCCTCTC ACTCTGCGGCTGCGGCAGGCGCCAGTAGGCCCGGCGCGCGGCCGCCCCTCACGGCGGCGA CGGCGCACCGGAGTCGGGTCCCTCTCCCTCCTGCTCGACGAGTCCTGAGTAGACGGCACG GCTCTGCTCCGGCCTCCATTGTAGAGGCTCGTGCTCCGCTTGATTCCCCGCTCCTCTTTC CGGCCATCCCGCCGCCCCTTCCTGGCCTCCTCCTCCTCTCGCCGCCGGCTAGAAGCGCCG ATAGCTGCCGTCCTCCGCCGCTTCCTGCTCCCGTTGCGTTCGTACCATCGTCTTACTCCT GCGTATGCTTGTTCCGGCCGTTCGGGACACCATGCGCACCACGTGTTTGCGGGATTGCCT AGCCGAGCTGCTCCGCTGCGGGGGCCAGCGCCAGGGCCAGGGCCGATTCTGCTGCCCCGC ACAGTTATCTCTCGCCCGGGGGATGACGCAGAGCCGCAGCGTGAGGCAACGGAGCAAGAA GAAGCGGGTGCACGCGCTCGAGGTGGCCACGGAGCGGTGGAAGGTACTCACCAAGGTGCT CGCCGTCATCGACACGCTCAAGAAGGAGGAGGAGCACGTCACCCCGCTCAAGCGCCTTGA GATCCTGCGCTCACAGCTCGGGCTCACCAAGCCCAACAAGGTGGCCCACTTCGTGCGCCG CTCGCCGCAGCTCTTCGAGGTCTGCCGCGACAGCCGAGGCGTCATGTGGGCGGGCCTCTC GCCGCAGGCCGAGGCGCTCGTCGAGGAGGAGGCACGCCTGCTGGAGGATCACTCACGCAC GGCCGCTGAGTACGTCACCAGGCTGCTGATGATTTCGGTGGACCGTCGTCTGGCCATCGA CAAGATTGCACATTTCAGGCGCGACATGGGGCTTCCTCATGATTTCAAGACACGATGGGT TCACATGTTCCCTGAGCAGTTCAGGGTGGTCAGGTTGGAGGACGGCGATTACCTGGAGCT TGTCTCTTGGAATCCAAACTGGGCAGTCACCGAGCTCGAGAAAAAGACGGCAGCATTGAC TGGTGATGCAAATGCTAATGACATTGCCAGTCCACCAGGAGAGCTCTCACTATCATTCCC CATGAAGTTCCCACCAAATTTTACAAGTTACTACAAATTCCGCGGAAAAGTTCATCATTA TGTGAAAAAAGGCAATACTGAGCAGTTTCAGAAGACAACATACCTATCTCCTTATGCAGA ACCAGGAGGATTGACTCCTGGCTCGCCGGAGTTTGACAAGAGGGCAGTTGCAGTGATGCA TGAGATACTGAACTTCACGTTGGAAAAGAGGCTGGTGACTGATCACCTCACACATTTCCG TCGTGAGTTTGTTATGCCGCAGAAGTTGATGAGACTGCTTCTGAAGCATTATGGCATCTT TTATGTCTCTGAGAGGGGGAAGCGGTTTAGCGTATTCTTGACGGAGTCTTATGATGGGAC AGAATTAATAGAGAAGTGCCCATTGGTGAGGTGGAAGGAAAAAGTCCTTCAACTTACCAG CTATAGAGGGAGGATCAAGAATCTTGGTAAATTTGCCGAGTTGTCTGATTCAGAGGACTA TTTGTTTGGTAATGATGATAGTAGCGGTGCTACTGATTCTATATTGGATGTCAAAAGTGA AGATTCGGATGATATCATGGATGATGGCGCTCTTGCAGATGATACTGAGATGGATGTAGG GGATCTAAGTGATTGTTGCATAGAGTGAATAAGTGACATCGATTAATTTAAAGAGCAGTT TTTTATTTTTGTTCCCT